Anoplopoma fimbria (sablefish): 129098850
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Entry
129098850 CDS
T09102
Symbol
notch3
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04330
Notch signaling pathway
afb04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129098850 (notch3)
04371 Apelin signaling pathway
129098850 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
EGF_3
Ank_3
Ank_4
Ank_5
EGF_Teneurin
EGF_DL_JAG
cEGF
DUF7472
Motif
Other DBs
NCBI-GeneID:
129098850
NCBI-ProteinID:
XP_054463942
LinkDB
All DBs
Position
11:complement(13310616..13338940)
Genome browser
AA seq
2477 aa
AA seq
DB search
MEGNIPWIILSFLLFMHMCEGSRCADKYRPCENGGTCLDSPSRCICRLGFIGPLCQHQDP
CHRSSPCLNGAACKSQVVNGIPQYTCVCQRGFRGQDCSLIDACATSPCANGARCANWNNH
YNCSCPPGFQGKNCRNDIDECRKTGVCLNGGLCINTHGSFRCQCQPGYSGRTCEVSTLPC
APSQCLNGGTCRQTSDHSYKCACLPGFSGHNCENNVDDCPGHKCMNGGICVDGVNTYNCQ
CLPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCAIA
VCFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPA
GFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQ
NDATCLDRIGEFTCICMPGYMGTYCEVDVDDCDSNPCVNDGICRDMVNGFTCTCQPGFTG
TMCQIDIDECASTPCQNGAKCQDQPNGFDCHCAEGYEGTLCKSNINNCQPDPCHHGTCVD
GIASYTCNCDAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCEINF
DDCASNPCDYGICKDGINRYDCVCKPGFTGPTCNVEIDECASSPCRNGGTCVDEENGFHC
QCPEGFKPPYCYSQVDECGSSPCVHGSCRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPC
QNAGTCIDQLNGFTCKCRQGFRGNLCQVNINECASSPCLNKGTCVDGVASFTCLCELPYS
GPTCAEVLTPCSPNPCSNHAICTHTADYLGYQCNCQSGWQGQLCNVDVNECISNPCKNRG
TCTNTLGGFVCSCRAGFTGLMCESDINDCSPNPCLSGGSCTDGVNSFYCSCLAGFTGPRC
ALEINECQSSPCKNGGTCTDYVNSYTCTCRPGFTGIHCETNIPDCTESSCFNGGTCTDKI
NGYSCNCRSGFTGSHCQYEVNECDSQPCLNGGICQDALESFRCSCPKGYTGNRCQTPVDW
CRRSSPCQNGGRCRPKDASFTCDCSNGWSGRYCDVSRVSCETAARHRGLQTDELCHHGGH
CVNTGNAHFCKCPADYTGSYCESQVDHCEDKPCRNGATCRGYVGGYQCDCMPGFTGQNCE
IEINECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCAPPLRMRSAPPKCLNN
GTCVDRVGGYRCNCPPGFTGERCEGDINECLSNPCSPSNSLDCIQLPNDYQCVCKPGFTG
RGCQSRFSVCESQPCQSGGVCSVSSSSALGYTCTCQLGYAGPNCERSMSCRELPCYNGGS
CALTXRGARCTCVPGYGGPQCQHRSNEGCSSQPCRNGGLCTEETSFPFFHCQCPAGWIGK
RCEQSSRSTEVPSPSCPLADCHGKAKDGVCDKECNTFLCRWDGGDCSLAMDPWSRCENCW
QVFNNSQCDESCNTVDCLYDNFDCKSKGKVCNPIYEAYCIDHYADGKCDQGCNTEECGWD
GLDCAGKVPEDLADGVLVLVVLLPPEKLLLTSTAFLQKLSAILHTSLRFRLDQNGEAMIR
PYTRKDSRYKRELQPHQEVIGSLVYLEIDNRLCSQGSEGCFPTAKSAADYLGALSAVEML
RFPYPLKAASVEHLPDDSIPPWGKLMLVGIASLFLLVILVIGMLIARRKREHSTLWFPEG
FFLKKEPSSNKNRREPVGQDALGMKNMPKNAEESLLGDHSEHWMDSDCPEPKRLKVEEPS
MLSDSEDAVDSRQWTQHHLAAADIRVPPTMALTPPQGEFESDCMDVNVRGPDGFTPLMLA
SFCGGGLEPEVAEEEEAEECSANIISDLIYQGASLAAQTDRTGETALHLAARYARADAAK
RLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRNRATDLDSRMYDGSTALILAARL
AVEGMVEELITCHADVNAVDELGKSSLHWAAAVNNVEATVALLKNSANKDMQDLKEETPL
FLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQGH
GGAGHHLTGVHTLSPLMCPPSAYLPSLKNTPQGKKNRRPGTKGSNLGGQHANSLKESVKA
RNKKLTLDMQSALLESSVTLSPVDSLDSPHGGASNAGYLTNPTSPVAMQSQGLFHSSMSV
PNTPMVHSSMLEGGGPFAVSLAQLNDLGVGGMSLQGRVSMASDVNHGYVLSSGQMGLNMG
LVSPVSVPFDWHNRMSNAQCAQQVVNLVQSSQAGMHPQSPAMQQQNMLMHQQQLYRNAML
QPTPVTSTPTISPVKLPSIAEQQQQQQQQQQQQQQQLMNHSMTNQQSMARMGTSTPPTPQ
TSQPPPSFFQQQQMPQQPSQPQPPAHPPQAATPAAPPTQALPSQPSGSTAGTEDYPTPPS
QHSYSSALDATPKHYLHLPSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVAGPAQ
TQITQIPEANGKMQVFA
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaatattccatggattattttgtcatttttattgtttatgcacatgtgtgaa
gggtcccgttgcgcagataaatacagaccttgtgaaaatggagggacatgcttagattca
ccttcccggtgcatatgccgtctgggattcattggtcctctctgtcagcaccaggatccc
tgtcaccgatcatcaccatgtctgaacggagcagcttgcaagagccaggtggtcaatggt
atcccacaatacacctgtgtttgccagagagggttcagaggccaagactgctccctcatt
gatgcctgtgccacaagtccctgtgccaatggggcccgttgtgccaattggaataaccac
tacaactgttcctgcccacctggcttccagggaaagaactgccgcaatgacattgacgag
tgccgcaagaccggcgtgtgcctcaatggcggcctctgcattaacacccatgggtccttc
cgctgtcagtgccaacctggatacagcgggcgcacatgtgaggtgtccacgcttccctgt
gccccatcccagtgccttaatgggggcacctgtcgtcagaccagcgaccattcctacaag
tgtgcttgcctaccagggttttcgggccacaactgtgagaataatgtggatgactgtcca
ggtcacaagtgtatgaatggaggaatatgcgtggatggtgtcaacacctacaattgccag
tgcctaccagaatggacagggcaatactgcgctgaggatgtcaacgagtgtctcatgcaa
ccaaatgcctgccataatgggggtacttgcttcaacaccatcggtggtcatacctgtgtc
tgtgttaacggttggactggagatgactgcagtgagaatatcgatgactgtgccatagcc
gtttgcttcaatggggccacctgccatgaccgtgtagcatccttcttctgcgagtgccca
gttggaaagacaggtttgctgtgccaccttgatgatgcatgtgtgagtaacccttgcaac
gagggggcagtgtgcgacaccaacccccttaatggccgcgccatttgcacatgtcctgcc
ggctttgtaggaggtgcctgcaaccaggacatggatgagtgttcaattggtgccaaccca
tgtgagcattttggtaaatgtgtgaacacagagggctccttccagtgtcagtgcggccgc
ggatatgccggcccgcgatgtgagattgacatcaacgaatgcctgtccatgccctgccag
aacgacgccacttgcctggaccgcattggagagttcacctgcatctgcatgccaggttac
atggggacttactgtgaggttgacgtagatgactgtgatagcaacccatgtgtgaatgat
ggcatctgtcgggacatggtcaatggcttcacatgcacctgccagccagggtttaccggc
accatgtgtcagatcgacatagatgagtgcgccagcacgccttgccagaatggagcgaaa
tgccaggaccagcccaatggattcgattgccactgtgctgaaggttatgaagggacactc
tgcaagagtaatatcaacaactgtcagcccgacccatgccaccatggtacttgcgtagat
ggcattgccagctacacctgtaactgtgatgctggctacacaggttatcgctgtgagaac
cagctcaatgagtgccacagcaacccttgtcagaatgggggcaagtgtgtggacctggtc
aacaagtacatctgccagtgccaacatggaacctctggcacaaattgtgaaataaacttt
gatgattgtgccagcaacccatgtgactatggcatctgcaaagatggcataaaccgctat
gactgtgtttgcaaacctggcttcactggtcccacgtgtaatgtggagatagatgagtgt
gcatctagcccctgcagaaatggggggacatgtgtggatgaagagaatggatttcactgc
cagtgtccagagggctttaagcccccttactgttactcccaggtggacgagtgtggcagc
agcccatgtgtccatggctcatgcagagatgacatcaacggttatcgctgtgactgtgag
cccggatgggtggggaagaactgtgacctggacaggaacgattgtttgccgagtccctgc
cagaatgctggcacgtgcatcgaccagctcaatggcttcacctgcaaatgtcgtcaaggc
ttcagaggtaacctctgccaggtgaacatcaacgaatgtgcatccagtccctgtctgaac
aagggcacttgtgtggatggtgtggcaagtttcacctgtctgtgtgagcttccttacagt
ggaccaacttgtgctgaggtcctcaccccttgttcccctaacccatgttccaatcatgcc
atctgcacacacacagcagactacttgggctatcaatgtaactgccagtcaggttggcaa
ggtcagttgtgcaatgtggatgtaaatgaatgcatctcaaacccttgcaagaaccgtggg
acctgcacaaacacacttggaggctttgtgtgctcctgcagagctggatttactgggctg
atgtgtgaatccgacatcaatgactgttctcctaatccatgcctaagtggagggtcctgc
acagatggtgtgaactccttctactgtagctgcttggcaggcttcactgggccccgctgt
gctttagagatcaatgaatgccagagttccccctgcaaaaatggaggcacatgcacggac
tatgttaactcctacacctgcacctgtaggcccggctttaccggcatccactgtgaaacc
aacatccctgattgcactgaaagctcctgcttcaatggagggacgtgcacagataaaatc
aacggctactcttgtaactgccgctcaggcttcactggctcccactgccaatacgaggtc
aatgagtgtgactcccagccctgcctcaacggaggcatctgtcaagatgccctggagtcc
ttccgttgctcctgccctaagggctacactgggaaccgctgccagacaccagtcgactgg
tgcagacgctcatctccctgccaaaatggaggacgctgccgcccgaaggatgcttccttc
acctgtgactgttccaacggctggtctggacgttactgtgacgtctccagggtttcttgt
gagacagctgctcgccatagaggactccagacagatgagctatgccaccacggtggtcac
tgtgtcaacaccgggaatgcccacttttgtaaatgtcctgctgactacactggaagctat
tgcgaaagccaagtggaccactgtgaagacaaaccctgccgcaatggcgccacctgcagg
ggatacgtgggagggtatcagtgtgattgtatgccaggctttactggacagaactgcgag
atagagatcaatgagtgccagtctcatccttgccagaatggaggcacttgcattgatctg
gtgggacattacatctgctcctgcccccctggcacactgggtgttctctgtgagatcaat
gaagatgactgtgccccacctctgaggatgcgcagtgctccccctaagtgcctgaacaat
ggcacctgtgtggaccgagtgggtggataccgctgcaattgtccccctggattcacagga
gaaagatgtgagggagacataaatgagtgtctctccaacccctgcagtccctccaacagt
cttgactgcatccagttgcccaatgactaccaatgtgtctgcaagcctggattcacaggc
cgagggtgtcagagcaggtttagtgtgtgtgagtctcagccttgtcagagcggaggagtc
tgttccgtgtccagcagctctgcactgggatacacttgcacgtgtcagcttggttatgct
gggcccaattgtgaaaggagcatgtcctgtcgggagctgccctgctacaatggaggtagc
tgtgcgctcaccnnacgaggggcgcgttgcacctgcgtgccaggttatggtgggccccag
tgtcagcatcgcagtaatgaaggctgctcttcccagccctgccggaatggagggttgtgc
actgaagagaccagcttcccgttcttccactgccagtgtcctgctggctggataggtaaa
cggtgcgagcagagcagcagatccacagaggttccatcaccctcatgccctctagcagac
tgtcacggcaaagccaaggatggtgtttgcgacaaagaatgcaacacgttcctttgtcgc
tgggacggcggggactgttctctagcgatggacccctggtctcgttgtgaaaactgctgg
caagtcttcaacaacagccagtgtgatgagtcctgcaacactgttgactgtctgtatgac
aactttgactgcaaaagcaaggggaaagtttgcaatccaatttatgaagcctactgtata
gaccactatgctgatggaaagtgtgaccagggctgcaacacagaggagtgtggctgggat
ggcttggactgcgcaggaaaggttccagaagaccttgctgatggtgtcttggtcttggta
gtcctactgcctccagagaagcttctcctcaccagcacggcttttctacagaaattaagt
gctatcctacacacttcactccgcttccgactggaccagaatggagaagccatgattcga
ccctacactcgcaaagactcccgctacaagcgggagttgcagcctcatcaggaagtcatc
gggtcattagtgtacctggaaatagacaaccgtctgtgctctcagggctctgagggctgt
ttccctacagctaaaagcgctgcagactacctgggagccctctcagctgtagaaatgctc
cgctttccttaccccctcaaagcagctagtgttgaacacttgcctgatgactccatacct
ccatggggaaagctgatgctggtggggatagcttctcttttccttttggtcatccttgtg
ataggcatgttgattgctcgtagaaagagggaacacagtaccctctggttccctgaaggc
ttcttcctcaaaaaggaacccagcagcaacaagaaccgcagggaacccgtgggccaggat
gctctggggatgaaaaacatgccaaaaaatgcggaggaatctctccttggagatcacagt
gaacattggatggactcagactgccccgagccaaaaagactcaaggttgaggagccgagt
atgctctcagacagtgaagatgcagtggacagcaggcagtggacacagcatcaccttgca
gccgcagacatccgtgtgcctcccaccatggccctcaccccacctcaaggagagtttgaa
agcgactgcatggatgttaacgtccgaggcccagatggttttacacctctgatgttggca
tcattctgtggaggtggcttagagcccgaggtagcagaagaggaggaggctgaggagtgt
tcagccaacatcatctctgacctaatctaccagggagcctcccttgctgcccaaacggac
cgcactggtgagacagcgctccacctggctgctcgctatgcccgtgctgatgctgctaag
aggctgctggatgctggggcagatgccaacgctcaagataacacaggacgtacaccgcta
catgctgcagtggctgcagatgcacagggtgtcttccagattctgatcagaaatcgggct
acagaccttgactcccgtatgtatgatggctctactgcactgatcctggcagcacggctg
gcagtagagggcatggtagaggagctcatcacttgtcatgctgatgtcaatgcagtagat
gaattgggtaaatcttccttgcactgggctgccgccgtgaacaatgtggaagcgactgtt
gccctgctgaagaatagcgcaaacaaagacatgcaagatctgaaggaggagacccctctg
ttccttgcagcccgtgaaggcagctgtgaggctgtgaaggtgctgctggctcactttgca
aacagagagatcacagaccatatggacaggttgccaagggacattgctcaggagcgcatg
caccacgacatcgtgcagcttcttgatgagtacaacacagtaaggagtccccagggccat
ggaggggctggacaccacctcactggtgtacacactctgtctccactaatgtgccctccc
agcgcttacctgccgagtctgaagaacaccccacagggcaagaagaaccgtcggcctggg
accaagggttcaaacctgggaggccaacatgctaacagtctgaaggagtcggtcaaggct
cgtaataagaagctgaccttggacatgcagagtgccttactggagagctcagttaccctg
tccccagtcgactcactggactcaccccacgggggagctagcaatgctggctacttaacc
aaccccacttcccctgtggccatgcagtcacaagggctcttccactcctccatgtctgtc
ccaaacaccccaatggtacacagtagcatgttggagggaggtggcccctttgctgtgtct
ctagcacaactcaatgacctgggagtgggaggaatgtccttgcagggacgcgtctccatg
gcttcagatgtcaaccatggctatgtgctgagttcaggccagatggggctcaacatgggc
ttggtcagtcctgtcagtgtaccctttgactggcacaaccggatgtccaacgcccagtgt
gctcagcaggtggtgaatcttgtgcagagtagccaggcaggtatgcacccacagagccca
gccatgcagcagcagaacatgctgatgcaccaacagcagctctaccgtaatgccatgctg
cagcccacacctgttacctccacacctaccatcagcccagtcaagctgccctccattgct
gagcagcagcagcagcaacagcagcagcaacagcaacagcagcagcagctcatgaaccac
tccatgaccaaccagcagagcatggcccgcatgggtacctccaccccaccgacaccccag
acctcccagcccccaccgtctttcttccagcagcagcagatgcctcagcagccttctcag
ccccagcctcctgctcatcccccacaggcagccacgccagcagccccgcccactcaggct
ctgccctcccagcctagtggcagcactgcaggaacggaggattaccccacccctccctct
cagcacagctactcatccgcactagatgccacgcctaagcattacctccatttgcccagt
gagcatccctacctgaccccctccccagagtccccagagccctggtctagcccctctcct
cactgtgtctctgattggtcagattccacacccagcccagcagttgctggccctgcccag
acccaaattactcaaatcccagaggccaatggcaagatgcaggtgtttgcgtga
DBGET
integrated database retrieval system
