Anoplopoma fimbria (sablefish): 129098863
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Entry
129098863 CDS
T09102
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb00514
Other types of O-glycan biosynthesis
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129098863 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129098863 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afb01003
]
129098863 (colgalt1a)
Enzymes [BR:
afb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
129098863 (colgalt1a)
Glycosyltransferases [BR:
afb01003
]
O-Glycan biosynthesis
O-linked Gal type
129098863 (colgalt1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
129098863
NCBI-ProteinID:
XP_054463959
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All DBs
Position
11:13068642..13076206
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AA seq
611 aa
AA seq
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MHGLAWLPAALLALLLSGCAPPARAYFAEERWSPESPLLAPRVFLALICRNSEHSLPYFL
GTIERLNYPKDRMALWVATDHNKDNTTAILRDWLVKMQSLYHYVEWRPQEKPERYQNEDG
PKQWTDLRYEHIMKLRQVSLESAREMWADYYMLADCDNLLTNPDVVWKLMNENKTIIAPM
LESRAAYSNFWCGMTSQGYYKRTAAYMPIRKHLRKGCFAVPMVHSTFLIDLRKEASRELA
FHPPHPEYSWAFDDIIVFAYSARMADVQMFVCNKENYGYFPVPLRSHNTLQDEADSFLHS
LLEVNVRKPPVMPSKYVPVPKKQPDKLGFDEVFMINLQRRTDRRERMMRALYEQGITCKV
TAAVDGKATNISEIHAMGIHMLPGYNDPYHGRPLTKGELGCFLSHYNIWKEVAERRLKTS
LVIEDDLRFEIFFKRRLMNLMREVEDEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEAD
YSYWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMYNKHPVSDYMDQFETRDLKAFSA
EPLLVYPTHYTGDHGYISDTETSTVWDNEKVRTDWDRERSGKTGEQAEISTEAQNSDVLQ
SPLDSAAREEL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggctcgcctggctccccgccgccctgcttgccctgctgctgtccggctgcgct
cctcctgctcgggcatactttgcggaggagcgctggagccccgagtctccgctcctcgca
ccccgggtcttcctcgctctcatctgccgaaactcggagcactctttaccgtatttcctc
ggtaccattgaacgcctcaactatcccaaggaccgaatggctttatgggtagcgactgat
cacaacaaggacaacaccacagccattctgcgggactggcttgtcaagatgcagagcctt
taccattatgtggagtggaggccacaagagaaacccgaacgttatcagaatgaagacggt
ccgaagcaatggacggacctccgttatgagcacattatgaagctgcggcaagtatcgctg
gagtcagctcgtgagatgtgggcagactactatatgttggcggactgtgataacctcctc
accaaccccgatgtggtctggaagctcatgaacgagaacaagaccatcatcgcaccgatg
cttgaatcccgtgcagcctattcaaacttctggtgtggaatgacctcccagggttactat
aagcgcactgctgcctacatgcccataagaaagcatttgcgcaagggctgttttgcagtt
cccatggtccactccactttcctgatagacctcaggaaagaggcgtccagggagctggcc
tttcacccgccacacccagaatacagctgggcttttgatgacatcattgtgtttgcgtac
tccgctcggatggcagatgttcaaatgtttgtatgtaataaggagaactatggttacttc
cctgtgccgctgcgatcccacaatactttgcaagacgaagctgacagcttcttgcactcc
ttgctggaggttaatgtgcgaaaacccccagtgatgccttccaaatacgtacctgtacct
aaaaaacaacccgacaaactgggctttgatgaggtgttcatgataaacctgcagaggcgg
accgaccgcagagaacgtatgatgagggcactatacgagcaggggatcacttgtaaggtc
actgcagctgtagacggaaaagcaacaaatatcagtgaaattcatgctatgggcatccac
atgctccccggatataatgacccctatcacggtcgcccactgacgaagggagagctggga
tgcttcctttcccactataacatctggaaagaggttgcagagcgacgcctgaaaacctcc
ctggtgattgaggacgacctgcgcttcgagatcttcttcaaacgacgcttgatgaacttg
atgagggaggtggaggatgaaggcctggactgggatctcatttacatcggtcggaagaga
atgcaagtggatcatcctgagaaagctgtgcctaatatacacaacttagtggaagcagac
tattcatattggacactgggttatatgatatccttacaaggtgcagagaagcttttgaaa
gcagaaccacttaagaggattttgccggtggacgagtttcttccgatcatgtacaataaa
caccctgtgtccgattatatggatcagtttgaaaccagggacctgaaggcattctcagcc
gagcctcttcttgtgtatccgactcactacacgggcgatcatggctacatcagcgacact
gagacctccacagtgtgggacaacgaaaaggtccgtacagactgggacagagagcgctcg
ggaaaaactggagagcaggctgagatcagcactgaggcccagaactcagatgtgctccag
tcgcctttggacagcgcagcacgggaagagctatga
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