Anoplopoma fimbria (sablefish): 129098907
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Entry
129098907 CDS
T09102
Symbol
ush1ga
Name
(RefSeq) pre-mRNA splicing regulator USH1G isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129098907 (ush1ga)
Cilium and associated proteins [BR:
afb03037
]
Primary cilia and associated proteins
USH complex and associated proteins
129098907 (ush1ga)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
RGCC
SR-25
Motif
Other DBs
NCBI-GeneID:
129098907
NCBI-ProteinID:
XP_054464017
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Position
11:complement(11965086..11971760)
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AA seq
472 aa
AA seq
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MNDRYHKAARDGYLDLLKEATRRDLNAPDEDGMTPTLWAAYHGNLEALRLIVARGGNPDK
CDIWGNTPLHLAAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDTI
ATKQTGLNTKLVSKMRDRAFREAERRIKECVKMQKKHHKRMERRFHRETSEASASDVMSF
SSYTSSSISHKLHNLNATTVSVPYSQATLHATNRGKTKIQRKLEKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKDRGRRNVRDMFPRENYDAISRAISEPDLHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDIGGRDEDSADRSGNNVRLRSRLQH
YPSADEDSIGSARSLQERNVEELPWEDVELGLDDDDEATTSPLEVFLAAQSMSDFFSIFK
REKIDLEALLLCSDHDLKSIHIPLGPRKKILDACKRRLETIEDPDCIEDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaagcggcccgggatggctacctggacctgctgaaggaggcg
actcggagggatctcaacgcgccggatgaggatggcatgacaccgacgctgtgggctgct
tatcacggcaacctggaggctctgcggctgatcgtggcgaggggaggaaaccctgacaag
tgtgacatatgggggaacacaccgctccacctggcagctgccaatggtcacctcaactgc
cttttctttctggtgtctttcggtgccaacatttggtgcctggacaacgactatcacacg
ccactggacatggccgccacaaagaaccacatggattgcgtccgctacctggataccatc
gccaccaagcagacaggcctcaacacgaagctggtcagcaagatgagggaccgggcgttt
cgtgaagcagagcggcggatcaaggagtgtgtgaagatgcagaagaaacaccacaaacgc
atggagcggaggtttcatagggagacctctgaggcttcggcttcagatgtcatgagcttt
tccagttacaccagcagctccattagccacaagctgcacaacttaaatgcaaccacagtc
agtgtgccatattcccaggctactcttcatgccacaaaccgagggaagacaaagattcag
aggaagctggagaagaggaagcagggagatgggacatttaaaatctacgaggacgggagg
aagagcgttcgctccctctctggacttcagctgggcaacgatgtcatgtttgtcaaacag
gggacttacgtcaacccaaaggaccgtggccgccgcaatgtccgtgacatgttccccaga
gaaaactacgatgccatttcacgtgccattagtgagccggacctccacgggcccgacgtg
gactactctgagatcagcacagactcgggacacgactccctgttcaataggcccggtttg
ggcaccatggtctttaggaggaactatgtgagtggggggatgtttgacatcggtggtcgg
gatgaggacagtgcagaccgatcaggcaataacgtgcgtttacgcagtcggctgcagcat
tacccgagtgcagatgaagacagcatcggcagtgcacgcagccttcaagagaggaatgtg
gaggagctgccctgggaagacgtggaattagggctggacgatgatgatgaggccaccacg
agtcctctggaggtcttcctcgccgcacagagcatgagtgacttcttctccattttcaag
agggagaaaattgaccttgaagcactgttgctgtgctctgatcatgaccttaagagtatc
cacatccccttaggcccaaggaagaagatcttagatgcctgcaagagacggctggagacc
atagaggacccggactgcattgaggacacagagctgtga
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