Anoplopoma fimbria (sablefish): 129098928
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Entry
129098928 CDS
T09102
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
afb04517
IgSF CAM signaling
afb04530
Tight junction
afb04810
Regulation of actin cytoskeleton
afb05100
Bacterial invasion of epithelial cells
afb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129098928 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129098928 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
129098928 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129098928 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129098928 (zgc:86896)
05100 Bacterial invasion of epithelial cells
129098928 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129098928 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129098928 (zgc:86896)
Membrane trafficking [BR:
afb04131
]
Others
Actin-binding proteins
Arp2/3 complex
129098928 (zgc:86896)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
129098928 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_HPS5
EIF3I
Rax2
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
SH3_3
Motif
Other DBs
NCBI-GeneID:
129098928
NCBI-ProteinID:
XP_054464042
LinkDB
All DBs
Position
11:17694127..17702798
Genome browser
AA seq
356 aa
AA seq
DB search
MSLYSFGLEPLSCHTWNKDRTQLAVSPNNNVVNIYEKKGKEWVKIHELTEHSGRVTGIDW
APDSNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKAIRSTVMSLNWHPNNILLAAGSADFHCRVFSAYIKDIEDKP
GPTAWGAKMPFGEMLLEHKDCGGWVHSVSFSPSGDQLALVAHNSSITVVDAAQGKEVTQL
TTNRLPLLSVLYASPTELVAAGHDCCPYQFTYKGPGALEFVKKLDIPKQTSKGGISAMQH
FQNLDKRATDDDTNELGTLHQNSITQMCVVSGEKAKVQKYSSVGLDGAMVIWDFKH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctacagttttggcctggaaccactctcctgccacacctggaacaaagacagg
acccagcttgcagtgagtcctaacaataatgtggttaacatctatgagaagaaaggcaaa
gagtgggtcaagatccacgagctgactgagcacagtggacgagtcacaggcattgactgg
gccccagactccaaccgcatcgtaacatgtgcctcagaccgcaacgcctacgtgtggact
ctgaaggatggagtgtggaagcccaccttagtcctggtgcgcatcaaccgtgcagccacc
tgtgtgaagtggtcaccactggagaacaagtttgccctgggcagcggagctcgcctcatc
tctgtctgctactttgagaaggagaacgactggtggctgagtaagcacatcaagaaggcc
attcgctctacagttatgagcctaaactggcatcccaacaacatcctactggcagctggg
tctgcagactttcactgcagggttttctcagcctacatcaaggacatcgaggacaagcct
ggacctactgcctggggggccaaaatgccttttggggagatgctgctggagcataaggac
tgtggaggctgggttcacagtgtctccttctcccccagcggagaccagctggccttggtg
gcccacaacagcagcatcacggtggtggacgcggcccaggggaaggaggtcacccagctg
accaccaaccgtctgccacttctgagtgtgctctatgccagccccactgagctcgttgct
gcgggtcatgactgttgcccctaccagttcacctataagggtccaggtgctctggagttt
gtgaagaagctggacatccccaagcagacctctaagggtggcatatctgccatgcaacac
ttccagaacttggacaagagggccactgatgatgacaccaacgagcttggcacccttcac
cagaacagcatcactcaaatgtgtgttgtatctggggagaaagccaaagtgcagaagtac
agcagtgtgggtctggatggagccatggtgatctgggattttaagcactga
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