Anoplopoma fimbria (sablefish): 129098931
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Entry
129098931 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129098931
03037 Cilium and associated proteins [BR:
afb03037
]
129098931
Transporters [BR:
afb02000
]
Other transporters
Pores ion channels [TC:
1
]
129098931
Cilium and associated proteins [BR:
afb03037
]
Other cilia and associated proteins
Stereociliary proteins
129098931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3504
Motif
Other DBs
NCBI-GeneID:
129098931
NCBI-ProteinID:
XP_054464049
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All DBs
Position
2:complement(32770901..32790460)
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AA seq
862 aa
AA seq
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MDAGAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQEKPELTLWEKNEVSVVVSL
ITMIAPSAFELVSQLEMYHPRTSLRFQLARVLVLYLGNLYSLIIALLDKVNSMSSAVPVS
PANWSESSSFLATISQPEVDSLSTLVSGISVSEHHNSTIATIATLLDVTNTSTRILGTIS
NQTALFEKNTRSQQDPCWETYVGQEMLKLSIIDMIFTVASILLIDFIRGLVVRYLSDCCC
WDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLT
CNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTVFAIVRYRPSQHCGPFSGQEKIYDIIS
ESETVSNDFPLWFSKVMSYVTSPVVVLPALLLLFMLIYYLQAIARSLKFTNNQLRMQLQT
ERTDDKKKVFQMAAARLQAPEAASDKKPDQQDSDVTSQEASIHTPSPRRNGSVTNCSSPV
RRGNSIHTISQSASRADLNRGSVAGSVRSPTVTILPKHRLEHIPNRPRPFLGGPSGTCRS
KSYHMGYNPPARFSDDIHSDPLYRKAIRSIHPVEAAGIIAAQSYGGRRGHTTRYVIVNEH
EPRKKLLRSSTRIPRHYLMEEPAEILELYPRNVKRYTPRPAHHNAHPHRAHPSHQHLSEE
EEEEEEEEGKSRRRMASGKAHRPRSLSDLHQPAHFYIGDRVEGHASAVKEGHARARGRQG
AQEPNEGEEEGEVEMDCGDLEPNSQVRAKVRGADSLLVRTRRHIHSPGRHCQSPARTRHM
ESLARPKTRPKLETPXTESDSASLASSSDQQNSSTDQYIQVIHNKEHHLKTDARQGKMGK
KKSKTIIDLNVVESNDLVCSNV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggatgctggggccgttctgatcagtctgcgtatcttggccaacatcctggtgctgctg
tctctggccggcagcatctacatcatctactttgtggtggatcgttctcagaagctggag
caggagaagccggagctgacgctgtgggagaagaatgaggtgagtgtggtggtttctctc
atcaccatgatcgctccgtctgcctttgagctggtgtctcagctcgagatgtaccaccca
cgaacctcgctgcgtttccagctggccagagtgcttgttttatacctggggaatctctac
agcctcattattgccctccttgataaggtcaacagcatgagctctgctgttccagtgagt
ccagccaactggtctgagtccagctccttcctggccaccatctctcagcccgaggtggac
agcctctccaccctggtttctgggatctcagtctctgagcatcacaacagcaccatagcg
accatcgccacgctgctggacgttacgaacaccagcacaagaatcctagggaccatctcc
aaccagacagctctgtttgagaagaacacccgctctcagcaggacccgtgctgggagacc
tacgttggacaggagatgctgaagctgtccatcattgacatgatcttcactgtggccagc
atcctgctcattgacttcatcagaggtttggtggttcgctacctgagtgactgctgctgc
tgggatttagagagcaagtttcctgaatatggagaattcaaaatagcagagaacgttttg
catctgatttataaccaagggatgatctggatgggagcgtttttctctccctgtcttcct
gcctttaatgtgttgaagctgattggtctgatgtatctgaggagctgggcggtcctcacc
tgtaatgttccacatcagcaggtgttccgagcctccagatcaaacaatttctacttggct
atgctgcttttcatgctgtttctgtgtatgctgcccaccgtcttcgccatagtgagatac
agaccgtcacagcactgtggaccattcagcggtcaagagaagatatatgacatcatctct
gaatccgagacggtgtccaatgacttccccctgtggttcagtaaagtgatgagttacgtc
actagccctgtcgtggtgctgccagcactgctgctgctgttcatgctgatatactatctc
caggcgatagccagatcccttaaattcaccaacaaccagctgaggatgcagctccagact
gagcggacagatgacaaaaagaaagtcttccagatggctgcagcgaggttgcaggctcca
gaggcagcgtctgacaagaagccggaccagcaggacagcgacgtcaccagccaggaggcc
tccatccacacgccatctccccgacggaacggcagcgtcacaaactgcagctctcccgtt
cgccgtggaaacagcatccacaccatcagccaatcagcttctagagccgacctgaacaga
ggaagcgtggctggatcggtccgaagtccaacagtgaccatactgcccaaacaccggctg
gagcacatacctaacaggccccgcccctttcttggtggcccgagtggcacctgcaggtcc
aagtcctaccacatgggctacaatcccccggctcgcttttctgacgacatccactctgac
cccctgtacaggaaggccatacgctccatacatccagtggaggccgccgggatcatcgct
gcccagagttacggaggccggcgtggtcacaccacccgctacgtgatcgtcaatgagcac
gagcccaggaagaagctgctgcgctcatccacgcggatcccacgccattacctcatggag
gagcctgcggagatcctggagctgtacccacgcaacgttaaacgctacacgccccgcccc
gctcaccacaatgcacatcctcaccgcgcccacccatcgcaccagcatctgagcgaagag
gaggaggaggaggaggaggaagagggaaaaagcaggagaaggatggcatcggggaaggcc
caccgtccccgatccctctccgaccttcaccagccggcacacttctacatcggggaccgc
gtagagggccatgcgtctgcggttaaagaaggtcacgctcgagctcgaggaaggcaagga
gcgcaagaaccgaatgaaggggaggaggagggtgaagtagaaatggactgtggagattta
gagccaaactcccaggtccgggccaaggtgagaggagcagactcgctcctcgtgcgaacc
aggcgtcacatccattccccggggagacactgccagtccccagccaggacccggcacatg
gagtctttggcgaggcccaagacgagaccaaagctggagaccccgntgaccgagtcggac
tcggcttccctggcctccagcagtgaccagcagaacagcagcactgaccagtacattcag
gtcatccacaacaaggagcaccacctcaagactgatgccagacaagggaagatgggcaaa
aagaagtccaaaaccatcattgatctaaatgtcgttgaatcgaatgaccttgtctgctcc
aatgtatga
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