Anoplopoma fimbria (sablefish): 129099053
Help
Entry
129099053 CDS
T09102
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129099053
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129099053
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129099053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129099053
NCBI-ProteinID:
XP_054464195
LinkDB
All DBs
Position
11:complement(23393363..23401432)
Genome browser
AA seq
649 aa
AA seq
DB search
MRGSYGDRDRDRGRDRGSPRFGSSRGGPTPGKKFGNPGDRLRKKRWDLDELPKFEKNFYS
EHAEVQRMSQYDVEEFCRKKEITVRGTGCPKPVTNFHQAQFPQYVLDVLMQQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
HCTFLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCIESEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVDTGRG
GGGRPRFRGGSNSNNPNLMYQDECDRRMRSVGGSGSAKESRGSNNSSSSSSSSSYGRDSR
DGHRGSSRDGERSSSSSSSSYRDRSSRDGGRSYSSSTNSYQNNNNGSSSSSRSSSGSGSV
GVGQAPPSSSGPQPLMAKQFNPPQPMLGLMGHSPFQFAPPLPPPPSGRK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcgtacggagacagagaccgagaccgaggccgtgacagaggcagccctcgc
ttcgggtccagcagaggcggcccaacaccgggtaaaaagtttgggaaccccggggaccgt
ttacggaagaagagatgggacctggacgagcttcctaaatttgagaagaacttttacagt
gaacatgcagaagtgcagcgaatgagccagtatgatgttgaggagttttgcaggaagaaa
gaaatcactgttcgaggtacaggctgcccaaagcctgtcaccaacttccatcaggcacag
tttccccaatatgtattggatgtactcatgcagcagaatttcaaggagcccacagccatt
caggcacaaggcttccctctggccctcagcgggagagacatggtgggcattgctcagact
ggctctgggaagaccttatcgtacctcctgcctgccattgtgcacatcaatcatcagccc
tacttggagcgtggagatgggcccatttgcttggtcctggcccccacaagagaactggcg
cagcaggtccagcaggtggcattcgattatggaaagtcctcccgcatcaaaagcacttgt
gtgtatgggggtgctcccaagggacctcaaataagagacctggagagaggtgttgagatc
tgcattgccacaccaggtcgtctgattgactttcttgaggctggaaagacaaacctgcga
cactgcactttcttggttctggatgaagctgaccgcatgctggatatgggttttgaacca
cagattcgcaagattgtggaccagatcaggcccgacagacagaccctgatgtggagcgct
acgtggcctaaagatgtccgccagctggcagaggacttcctgaaagactatgtccaaatc
aatgtcggagcactggagctcagcgccaaccacaacatccttcagatagttgatgtctgt
atcgagagtgagaaggacaacaagttgatccagctgatggaggagatcatggctgagaaa
gagaacaagaccatcatcttcgtggagaccaagaaacgatgtgacgatctcacacgcagg
atgagacgtgatgggtggccagcgatgtgtattcatggcgacaagagccagccagagaga
gactgggtgttatctgagttccgtagcggcaaagctcctatcctcattgctactgacgtg
gcctcgcgtggtttggatgtggaggatgtcaagtttgtcatcaactatgactatcccaac
tcatcggaggattacatccatcgcattggccgcacagcccgcagcaccaacaaaggcacc
gcctacaccttcttcaccccggggaacctccgccaggcccgcgagctgatccgggtgctg
gaagaggcccgacaggccatcaatcccaaactgctgcagctggtcgatactggacgtgga
ggaggtggccgtcctcgttttcgcggtggctccaattcaaacaatcccaacctgatgtac
caggacgagtgtgacaggcgaatgcgttctgtgggtgggagcggcagcgccaaggagagc
cgcggcagcaacaacagcagcagcagcagcagcagcagcagctatggccgtgacagtcga
gatggccacagaggaagcagccgtgacggggaacgctcctcctcctcatcttcctcctcc
tacagagatcgcagcagcagggacggagggcgcagctatagctccagcaccaactcatac
cagaacaacaacaacggcagcagcagcagctccaggagcagctctgggtcggggagtgtt
ggagtggggcaggccccgccctcttcatcgggcccccagcctctaatggccaagcagttc
aaccctccccagcccatgcttgggctgatggggcactccccattccagtttgctcctcca
ctgccaccccctccgtcaggcagaaagtaa
DBGET
integrated database retrieval system
