Anoplopoma fimbria (sablefish): 129099110
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Entry
129099110 CDS
T09102
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129099110
04020 Calcium signaling pathway
129099110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129099110
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129099110
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129099110
NCBI-ProteinID:
XP_054464254
LinkDB
All DBs
Position
11:complement(1790977..1896696)
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AA seq
2369 aa
AA seq
DB search
MTSEECPVPLGSLSSAGPGQSEEYGLVQADDIIEEVGPGDDVSIGSDLSTLVLPFPELAP
VVFFCLKQTTCPRNWCIRMVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQILQ
AFDAFIYIFFALEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMTGMVEYSLDLQNINLSA
IRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLR
NRCYLEENFTLSSGMTLPAPYYQPEEDDERPFICSLASDNGIMSCADVPTRREGGRTCCL
DREDALHRQALGLSPEPLANGSGAGEAVGLCINWNQYYTRCHTGSSNPHKGAINFDNIVY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETK
QREHQLMQEQRAQCLSSSTLASMAEPGDCYEEIFQLVCHVLRKAKRRSAALYYTLRGKPP
PAGGGRGNRRGGGHVNGERHHSRHPTTLQCPHQNKQDNGSQPLSNSISLTVPQNPEDCPL
CALSLKEGARAVGDSANGEKDEEDTVKETGKDENHLEDRGDGEKKRKRTCFGHCKDIWND
MRRKLWGIVESKYFSRGIMIAILINTISMGIEHHNQPDELTNVLEICNIVFTSMFTLEMI
LKLTAFGFFEYLRNPYNIFDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPAL
RRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLL
WAIVTVFQILTQEDWNMVLYNGMASTSPCAALYFVALMTFGNYVLFNLLVAILVEGFQAE
GDANRSYSEDDRSSCNFEENDKQKDSLHLSDPKICTLTPNGHLDLSALPHGLFPGERLTF
ALGSRKNSVISLGRANLEQRAMFTGRGYHNWGRPLPTQPQALWARRSSWNSLGGCRPFSS
SSPSASPAFTPTSARPFYGYGLAGLGGVVGGSLRIRGPRASSSPHRHFHHANQDEEESLL
SPPAVAPNSLHLPYPALPGRFVPRRDRRALSLELPHLLQVPGPPNPTPLAHLPPPPMTLH
AHHRKKSFSGGMVVGAGGGGGGGLESLGGLGGVHQDCNGKTPLSQLLQPPPRHHSEQGGG
ANPQGQLMVDVFPQVNTRSKDREDLDDDIEYSLCFRIEKMLEAYKPDWCETREDWSVFLF
SPQNKFRQICQSIIAHKLFDYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYIFTA
IFVGEMTLKVVSMGLYVGEQAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLR
LLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYC
FGLDVKNITNKSDCLQANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVAV
DQQPVTNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRMR
RMEKKRRKAQKLPYFASYGSVRLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPRSL
DLALKYCNYFFTSTFVLESVLKLIAFGFRRFFKERWNQLDLAIVLLSVMGITLEEIEISS
ALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAA
LGVELFGELVCNEDYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDN
GIDADYACNPSLQFISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEEAEMDAEI
ELELAQGTLCCMGAPGCGGGRADKGLVAAGPGGTAGGKDRGCGERGEGVRRMRHSAGSAH
SGAYNSRDSSRTLYSPAQESQWLDSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPPPICR
DCKGHPQEQIRMAEIEQASLKSEQLSDKSSSPALPDDLSLDEHTAYQLLSQEGKGSSSSD
SHSSEEAGGGGGHAGGLQTQTVVQSQVQGLGQPCRALSIGVEVETALQEMEMQTHQPHMR
SPHCSPGGVSSSSNKERNKGGGGGGASGISPLFHLPAEFFHPAGAAIPAPPRSRSLRLSR
GLRLTSPDSWASLRSPGAHSKMLCTQYPSHSDSSLATGSSEGSLQTTLEEGLSFSISPPQ
NLELPLPTAPLPLMCPLPLPEDGTAISSPVQTLRPRPSPSSGLTLQATRGHQRSQSSGRG
STSPGYTRDDSIDPSDEDLGIGIGSSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPSSLV
YPGGVVKKCNSTGSLDQGGMLLSSRGREGRREILGLELMDPQGFLANPWTGVLVDTRRGE
GRVEIGDGEQGLKGKSSSQTTVGPCRKNR
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggagtgtcctgtgccgctggggagcctctcctcagcagggccagggcag
agtgaggagtacggcctggtgcaggctgatgacatcattgaggaagtgggtccaggtgat
gacgtcagcatcggcagcgacctaagcactcttgtgttgcccttcccagagctggcgccc
gtggtcttcttctgcctcaagcagaccacctgtcctcgcaactggtgcatccgtatggtc
tccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtgacactg
ggcatgtaccagccctgtgagaacatcgactgcacctcggaccgctgccagatactgcag
gcctttgatgcattcatctacatcttctttgcattggagatggtggtaaagatggtggct
cttgggatctttggccgtcgctgttacctgggagacacctggaacaggctggacttcttc
atcgtcatgactgggatggtagagtactctctggacctgcagaacatcaacctgtcggcc
attcggacagtgcgggtccttcggcccctcaaagccatcaacagagtgccaagtatgcgc
atcctggtgaacctgctgctagacactctacccatgctcggcaacgtgctgctgctctgc
ttcttcgtcttcttcatcttcggcatcatcggtgtgcagctgtgggcgggtctactgagg
aaccgctgctacctggaggagaacttcaccctctcttcaggtatgaccctgccggctccg
tactaccagccggaggaggacgacgaacggcccttcatctgctccctggcatccgacaac
ggcatcatgtcgtgtgctgatgttcctacgaggcgcgaaggaggacgcacatgctgcctt
gacagggaggacgcgctccacagacaagctctgggcttgagtcctgagccgctggccaac
ggtagcggtgctggggaggcagtgggtctgtgcatcaactggaaccagtactacactcga
tgccacacaggaagcagtaacccccacaaaggtgccatcaactttgataacattgtctac
gcctggatcgtaatctttcaggtgatcactctggagggctgggtggagatcatgtattat
gtaatggatgcccattccttctacaacttcatctacttcatattactcatcattattggt
tcattcttcatgatcaacctgtgcctggtggtcatcgccacccagttctcggagaccaaa
cagcgggaacaccagctgatgcaggagcagagggcgcagtgcctgtcatcctccaccctg
gccagcatggctgagcctggagattgctacgaggagatcttccagctggtctgccacgtc
ctccgcaaggcgaagaggagatcggccgctctctactacacgctgaggggcaaacccccg
ccagctggaggaggcaggggtaacaggcgtggcggagggcatgtgaacggagagcggcat
cattccaggcacccaaccacattacaatgtccccaccagaacaagcaggacaatggctct
cagccactctctaactccatcagtctgaccgtccctcagaaccctgaggactgcccttta
tgtgcattatcactgaaagagggggcgagggcggtgggagactccgccaacggggagaaa
gatgaggaggacacagtgaaagagacgggcaaggatgagaaccatctggaggacaggggg
gatggagagaagaagaggaagaggacatgcttcggacattgtaaagacatttggaatgat
atgaggaggaaactttggggcattgtagagagcaagtacttcagcagaggcatcatgatc
gctattctcatcaacactatcagtatgggcatcgagcatcataaccagcccgatgagctg
accaatgtcctggagatctgcaacattgtcttcaccagcatgttcaccctggagatgatc
ctaaagctgactgcttttggcttcttcgagtacctgaggaacccctacaacatctttgat
ggcatcattgtcatcatcagtgtgtgtgagatcatcggtcaggcagacggcggtctgtca
gtgctgaggaccttcaggctgctgagggtcattaagctggtgaggttcatgcctgcactg
aggcggcagctggttgtgctgatgaagactatggacaacgtggccactttctgtatgctg
cttatgctcttcatcttcatcttcagtatcctggggatgcatatctttggttgtaagttc
agtctgaagacagaagcaggagacacggtgcctgacaggaagaactttgactctctgctc
tgggccattgtcaccgtctttcagattctgacccaggaggactggaacatggttctgtac
aatgggatggcatccacctcgccctgtgctgctctctactttgtggctcttatgacattt
ggaaactatgtgctcttcaatttactggttgccatcttggttgagggtttccaagctgag
ggtgatgcaaaccgctcctactcggaggatgacaggtcgtcgtgtaattttgaggagaat
gataagcagaaggactctctgcatctctcagacccaaagatctgtactctgaccccaaac
gggcacctggacttgtccgctctgccccacggtctgtttccaggagagaggttgaccttt
gctctcggctccaggaagaacagtgttatttctcttggtagggccaacttggagcagagg
gcaatgtttacaggtcgaggttatcataactggggtcgccctctgcccacccagcctcag
gccttgtgggcgcgtcgttccagctggaacagcctgggaggatgtcgccccttctcctcc
tcgtctccctccgctagtccagccttcacccccacctctgcaaggcccttctacggctac
ggcctagcgggtcttggcggagtagtcggaggaagccttcgtatccggggtccccgcgcc
tcttcatcaccgcaccgccacttccatcatgccaaccaggatgaggaggagtctctcctc
tctcctcccgctgtcgctccgaactctcttcacctcccttatcctgcgctgccgggccgt
tttgtgcccagaagggaccgcagagctctgtcactcgagctgccccacctgctgcaggtc
ccaggacccccgaacccaacgccgctggcacacctcccgccgccccccatgacgctccat
gctcaccacaggaagaagagcttctctggggggatggttgtcggtgcaggtggtggtggt
ggtggtgggcttgagagtctgggtggcttaggaggggtacaccaagactgtaatgggaaa
actcctctgtctcagcttctccagccccctcctagacaccactctgagcagggtggaggg
gccaacccccagggccagctgatggtcgacgtcttcccccaggttaacacacgcagcaag
gaccgcgaggacctggacgatgacattgaatatagcttgtgcttccgcatcgagaagatg
ttagaagcgtacaaaccggactggtgtgagaccagagaggactggtctgtcttcctgttt
tccccacagaacaaattcagacagatatgccagtccatcatagcccataagctgtttgac
tatgtggtgttggccttcatcttctccaactgcatcacagtagctctggagaggcccaag
atcctacagggcagcttggaaagagtctttctcaccatctccaactacatatttaccgcc
atctttgtgggcgagatgacactcaaggtggtttccatgggtctgtatgtgggtgaacag
gcttacctgcggagcagctggaacattctggatggcttcctggtttttgtgtctttgatt
gacattgtcgtgtccatggcgggtggggccaagatcctgggtgtgcttagagtactccgg
ctgctcaggacattgcgtcccctcagggtgattagcagagctccgggtctaaagctggtg
gtggagaccctcatcacctccctcaaacccattggcaacattgttctcatctgttgtgcg
ttcttcatcatctttggcattcttggggtgcagctgtttaaaggcaagttcttctactgc
ttcggccttgatgtcaaaaacatcaccaacaagtctgactgtctgcaagccaactacaag
tgggtccaccataagtacaactttgacaacctgggacaggctctgatgtccctgtttgta
ctcgcctccaaggacggctgggtgaacatcatgtatcacggcctggatgctgtggctgtg
gaccaacagccggtgaccaacaacaacccgtggatgctgctgtacttcatctccttcctc
ctcatcgtcagcttctttgtcctcaacatgtttgttggcgtggtggtggagaacttccac
aagtgccgccagcaccaagaggtggaggaggccaaaaggcgcgaggagaagcgtatgcgt
cgcatggaaaagaagaggagaaaagcccagaagctgccctactttgccagctatggcagc
gtacgcctgatgatccacacactgtgcacaaatcactacctggacctcatcatcaccttc
atcatctgcatcaacgtcatcaccatgtccttagagcactacaatcaacctcgttctctg
gatcttgccctgaagtactgcaactatttcttcacctccacgtttgtgctggaatcggta
ctcaaactcatcgctttcggcttccgccgcttcttcaaagagaggtggaaccagttggac
cttgccattgtgcttctgtcagtgatgggaatcaccctggaggagatcgagatcagttcc
gccctgcccatcaaccccactatcattaggatcatgagagtgctgaggatagcaagagtg
ctgaagctgctgaagatggcgacaggaatgagagccctgctggatacggtggtccaagcc
ctgcctcaggtgggtaacctgggcctgctcttcatgctgctgtttttcatctacgccgcc
ttaggagtagagctatttggagaacttgtttgcaatgaagactacccatgtgagggtatg
agtcgtcacgctacctttgagaactttggcatggccttcctaaccctgtttcaagtctcc
acgggcgacaactggaatggcatcatgaaggacacgttgcgggagtgtccaccggacaac
ggcattgatgcggactatgcctgcaaccctagccttcagtttatctcgcccatgtacttt
gtctccttcgtgctcaccgcccagttcgtgctcatcaatgtggtggtggccgtgctgatg
aagcacctggacgactccaacaaggaggcccaagaggaggcggagatggatgcagaaatt
gagctggagctggcccagggcaccctctgttgcatgggcgcccccggctgcgggggtggg
agggcggacaagggactggtcgctgctggacccggaggcacagcgggggggaaggacaga
ggatgtggagagaggggagaaggagtgaggaggatgcgacattcggcgggcagtgcacac
tcaggagcgtacaactcccgtgactccagccgaaccctgtactcaccagcacaagagagc
caatggctggacagcgtatctcttctgatcaaggatacacttgagggggagatgctgatg
atcgacaatctctccggttctgtcttccaccactattcttctcctccacccatctgcaga
gattgcaagggccatccacaagagcagatcaggatggcggagatagagcaggcgtcgctg
aagtcagagcaactgtcggacaagtcctcatcgcccgctctgccagatgacctcagcctg
gacgaacacactgcctaccagctgctgtcgcaagagggcaagggaagcagcagcagtgac
tcccacagctcagaggaggctggaggtggaggaggtcacgcaggaggcctccagactcag
accgtggtgcagagccaggtgcagggtttgggccagccctgccgggccctcagcattgga
gttgaggtggagaccgcgctgcaggagatggagatgcaaacccaccaaccacatatgcgc
tcacctcactgtagccctggtggcgtttccagcagcagcaacaaggaaagaaacaaagga
ggaggaggaggaggagccagtggcatttctcctctcttccatctgcctgcagagttcttc
caccctgcaggagcagccatcccagcacctccccgcagtaggagcctacggctgtcaagg
ggcctgaggctgacctccccagactcctgggcctcactccgctccccaggagcccatagc
aagatgctctgtacacagtatccgtcccacagtgactcatcccttgctacaggcagctct
gagggcagcctccagaccaccctggaagagggactgagcttcagcatctccccaccacag
aacttggagttgcccttgccgacagctcccttaccactcatgtgcccactcccgttgcct
gaagacggcactgccatttcctccccagtccagaccctgagaccgaggccgagcccctca
tcgggcctcaccctccaggccaccaggggccaccagcgtagccagagcagcggccgaggt
agcaccagcccgggctacacccgcgacgactccatcgacccttcagacgaggacctgggc
ataggtatcggatcctcaattggtggttgtggctccagccaagcgggcaacagtgaacac
ttgtcagagacgctgagcagcttgtcgctgacttcgctgctgtcgcccagctccctggtg
tacccggggggggtggtgaagaagtgcaacagcacaggcagcctggaccaaggggggatg
ctgctgtcgtcccggggcagggagggacgcagggagattctgggcttggagcttatggac
ccccaaggcttcttggccaacccctggacgggggtattagtggatacaagaagaggagaa
ggacgagttgaaattggagatggcgagcaagggctcaaagggaagagctcgagccaaaca
acagtagggccttgtcggaaaaacagatga
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integrated database retrieval system
