Anoplopoma fimbria (sablefish): 129099151
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Entry
129099151 CDS
T09102
Symbol
hdac5
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 5
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129099151 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129099151 (hdac5)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129099151 (hdac5)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129099151 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
129099151
NCBI-ProteinID:
XP_054464305
LinkDB
All DBs
Position
11:20224810..20275499
Genome browser
AA seq
1091 aa
AA seq
DB search
MNSSHASVVEVKSSLPSGMQSPVGAASEQRGGGGEGGGGPGEGPGGGGGPVDLRTEPRVG
SLSGAAAAAVDTAMREQQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHL
KQQQELLAAKRQQELEQKRKLEQQRHEEQEKHRLEQQLLLLRNKEKGKESAIASTEVKLK
LQEFLLNKKEPGIGGLNHSFSPKCWGAQHISLEQGSPPQSNTPGTPPSYKLPPLLGNYEG
KDDFPLRKTVSEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSLCNS
APGSGPSSPNSSNSAIANGNTGSVPNIQTELRSLHQTLGADGTLSPLNLYTSPSLPNISL
GLPANTHITAPQALSNQQEAERQAIQSLRGGGALTGKFLSTSSLPAGLGHEVETAPPSSH
SAHSSLLQHVLLLEQARQQTAMLAVPMYSQSPLVTAERGVSGGMRAVNKLPRHRPLARTQ
SAPLPQSPQALQQLVVQQQHQHFLEKHYKMLSKGAELPRPPPTHPEETEEELTETNDMQE
DDEGASLHRLQKEGSDDSTPSSERLGVHLEEHGIVHVKGESTESELDEEEEEDDIIQLRE
GDEEERGSYTQALQHLGVFQSPLPHRPLGRAQSSPASTVNPIKHLFTTGLVYDSLMLKHQ
CVCGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQSVHSEFHTLLYGTS
PLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFRV
AAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGN
GTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPEEVGSGAGVGFNVNIAWTGGVEPPMGDV
EYLTAFRSVVMPIAQHFSPDVVLVSAGFDAVEGHQSPLGGYNVSAKCFGQLTQLLMGLAG
GRVVMALEGGHDLTAICDASEACVASLLGEPCDSLFQWPQEKPCPKAWASLDRVIEIQNK
HWPCLQSLSQTSGHSLLDDPLGAQGQSEKDEAETVSAMASLSVDVEQPGLDPDNADTSRS
TEEPMEEEPVL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctcacacgcctcagtggtggaggtgaagagcagtctcccatcgggcatgcag
agcccagtaggagcagcaagcgagcagagaggaggaggcggagaagggggtgggggtccg
ggagaaggcccagggggaggaggaggcccagtggatctacggactgagcccagggtggga
tctctgtcgggggcggcagcggcggcggtggacacagccatgagggagcagcagctccag
caggaactggtgctcctcaagcagcagcaggagctccagaagcagctgctgttcgcagag
ttccaaaagaaacacgaagtgctcacgaggcaacacgaggtccagctgcaggagcacctg
aagcaacaacaggagctgttggcggcgaagcggcagcaggagctggagcagaagaggaag
ctggagcagcagaggcacgaggagcaggagaagcaccggctggagcagcagctgctgctg
ctaaggaacaaggagaagggcaaagagagtgccattgcaagtaccgaagtgaagctgaag
ctgcaggagttccttctaaataaaaaagagcccggtatcggcggactgaaccattccttc
tccccaaagtgctggggagcccagcatatctccctggagcagggctctcctccgcagagc
aacaccccaggaactcctccctcctacaaactgcccccgctgctggggaactacgagggc
aaagacgacttccctctccgcaagacagtctcggagcccaacctgaaggtgcgttcgcgg
ttgaagcagaaggtggctgagagacggagctccccgctcctccgcaggaaggacggaact
gtcatcagcacctttaagaagagagccatagagatatcagtctcctctctctgtaatagc
gctccaggttcaggtcccagcagtcccaacagctccaactcggctatcgccaatggcaac
acagggtcggtccccaacatacagacggagctgagatctctccatcagacgctgggggct
gatgggacattgagtcctctgaatctctacacatcgccctccttgcccaatatttccttg
ggcctccctgccaacacacacatcacggccccccaggcgctgtccaaccagcaagaggct
gagcgtcaagccatccaatcgctgcgagggggcggagctctaacagggaagtttctctcc
acatcctccctacccgcagggttggggcacgaggtagagacggcgccccccagctctcat
tctgcccattcctcgttattgcaacatgtactactactggagcaggccagacaacagact
gctatgctagctgtccccatgtacagccagtcgccgctggttacagcagagagaggcgtg
tccggcggcatgcgggccgtcaacaagctgcctcgtcaccggccgctggctcggacccag
agtgcacctctgccccagtccccccaggccctgcagcagctggtggtccagcagcagcac
cagcacttcctggagaaacactacaagatgctatccaaaggggcggagcttccaaggcca
ccgcccacccacccggaggagactgaggaggagcttacagagaccaatgacatgcaggaa
gacgatgaaggggcaagcctacacaggctccagaaggaggggtcagacgacagcacgccc
tcctcggagcgccttggtgtgcacttggaggagcatgggatcgtgcatgtgaaaggggag
agcacagagagtgagctggatgaagaggaagaggaagacgacatcatccagctgagggag
ggcgacgaagaggagagggggagctacacgcaggccttgcagcatctgggcgtgttccag
tccccgttgccccacagacctctgggaagagcgcagtcctcccccgcgtccaccgtcaat
cccatcaaacacctcttcaccaccgggcttgtgtatgacagtctgatgttgaagcatcag
tgtgtatgtggcaacgctcacatccacccggagcatgctgggagagtgcaaagcatctgg
tcccgactgcaggagacaggcctgctgggacgctgtgagaggattcgggggcgtaaagca
tctctggatgagatccagtccgtccattcagagttccacactctgctgtatggaaccagt
ccgctaaatcgacacaaactggaccacaagaagctgctgggtccaatcagccagaagatg
tacgctgttcttccctgcggaggaattggggtggacagtgacaccgtgtggaacgagatg
cactcgtcggcggcggtccgcatggcggtgggctcagtcatcgaactggccttcagagtg
gcggcgggggagctgaagaatggcttcgcagtggtgcgtcctccaggacaccacgctgag
gaatccaccgccatggggttttgtttctttaattcagtagccattactgccaagctgttg
caacagaagctgggagtgggcaagatcctcatcgtggactgggacattcaccatggcaac
ggcacccagcaggccttctacagtgacccaaacgtcctctacatctccctccaccgctac
gacgacggaaacttctttcctggcagcggagctcctgaggaggtgggatcaggtgctggt
gttggtttcaatgtgaacatagcgtggaccggaggagtggagccgcctatgggggacgtg
gagtacctcactgcctttaggagcgtagtgatgcccattgcccagcatttcagtccagac
gtggtactggtgtctgcaggcttcgatgctgtggagggtcatcagtctcctctgggagga
tacaacgtctccgctaagtgtttcggtcagctaacgcagctgcttatgggtctagcgggc
gggcgcgtcgttatggcgctggagggcggtcatgacctcacggccatctgtgacgcgtcg
gaggcctgtgtcgcctcgcttctgggagaaccgtgtgactctttgttccagtggcctcag
gagaagccatgtccaaaagcttgggcctcactggatagagtaatagagatccagaataaa
cactggccgtgtctccagagtctgtcccagacgagcggccactcgctattggatgacccc
ctgggggctcagggccaatcggagaaggacgaggcagagacggtcagcgccatggcctcg
ctcagtgttgatgttgagcagccgggcttggatccagacaatgcagacaccagcaggtcc
acagaggagccaatggaggaagagcccgtattgtag
DBGET
integrated database retrieval system
