Anoplopoma fimbria (sablefish): 129099164
Help
Entry
129099164 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129099164
04020 Calcium signaling pathway
129099164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129099164
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129099164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
129099164
NCBI-ProteinID:
XP_054464319
LinkDB
All DBs
Position
11:complement(6310560..6420044)
Genome browser
AA seq
2516 aa
AA seq
DB search
MTDGEGRVRFQYAESPEGQEEAREEVRLAIPTPCRTDAPGHDADPGGGRDEEEEEEVERT
RRRRGTGRGDGAEWSPEVQEHEDQEPELEVETGPTLGVRIRAPIRDPDCVSEEEEQQPYP
GLTPVAFFCLKQTTRPRNWCLRVVCNPWFEHVSMLVILLNCVTLGMFQPCEDVACQLEWC
RILEVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVMEYSLDGHNA
SLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWA
GLLRNRCFLEEDIITMYNLSISPYYMSEEGEDSPFICSAPRENGMLRCNSVPPHAEGGAN
CMAGLPPSSALIGSVNGCINWNQYYNVCKPGDLNPHKGAVNFDNIGYAWIAIFQVITLEG
WVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENALMREQRAR
YMSNDSTLASYSEPGSCYEEMLRYISHLYRKFTRRLQRIYSGWHSKRRKKVNPNGSGGGS
NGGGNGHGHGSSRGCGGLGPGSALWLRPIHNLLQHHQHQHCRLSNGGQHTTSAATTTERT
DGEGGEELEMKSLPARRGSTNRNGGEASGVAQGMGALLGRLNGGMNYPTILPSFVCSYSS
KTPPPSKQCGPSPEQHPPNHPASEHTETLNKLYQLMGQHSRQRLLYQLAGVVPSPLLLEL
LSCPMCARSLETLELELGDLEGGRGEADGLHDFPQGGDLRGRRGRSRRRGVREYKNGVVR
AWVAFRDKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDVLEISNIVFTSMFV
LEMGFMMLAFGFFGYIRNPYNIFDSVIVIISVWEIIGQADGGLSVLRTFRLLRVLKLVRF
LPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSVRMENGDTIPDRKNF
DSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEG
FQAEGDANRSESDDEKKSDNFSEDEKVEQLRDTELKMYSLMMTANGHVDPRGSMAPPIIM
RTAATPMPTPKSSLGPESVLEEELMYREGVPQYGEVGLGFSDVGSIHAESRRGSSTSMDP
LAYDQHSLGLSSPGRRSPLPPRSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGEE
EDGREEKGEAGVNNRLRQESLELLQASTLCPSIITEYGDCNGRTLTYDPTVNAEPKEDSL
NEDDIDEDSSFWLWLKKEILNMKPLWCKEHEDWTLYLFSPESKIRGWSQSVISHKLFDHI
VLVFIFLNCITIALERPDIKMQSNERKFLSVSNYVFTVIFLAEMAIKVIALGFCFGKQTY
LQSSWNVLDGLLVFVSLVDILVSLAYTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLV
VETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDMKNVTNKSDCLEGHYR
WIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFL
LIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKMIEKKRRSKENEGAEAKQRP
YYADYSPLRLYIHTLCTSHYLDLFITFIICINVFTMSIEHYNQPQYLEEVLKYCNYVFTC
IFVVEALLKLAAFGIHRFFKDRWNQLDIAIVALSIVGITLEELEMNAALPINPTIIRIMR
VLRIARVLKLLKMATGMRSLLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECTE
QNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECQQNERNCLPYLPLVSPI
YFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAMERERKLSATSHN
SSAGGTYVGPCPNSPGQEEEEKYGDLLSSRKMSVSRMHSLPNDSYMFRPVRPASAPYALE
EVDLSPQHEHSGSLTSVHSQPCEDRALLQVPDVSPVHPQQPPSLTLPRIAPPTPSASPRA
LRRQVAVKLDSVESQRCEQQERPNSVHLPPLSPSPSPLIIPPPITAASSSPSSPSALSLL
PSSPPAFPPPSPSSLHPLLSSPSSLPPTPSSPSLLLPPPPXPRLPLRPASLRRHRPPSAV
SLRDPADEEVYHITSSACHGRRDEEGGGQEGRGKVGRSHSLSPYATPHALNSTSSPSPPP
LPPSSSRSVLSLLGAGLTDRDFKKGLSVDNQAFPDKPSSLSAGYPDDQRRHSIEVCLPQA
FISNYDQHFAREAHRSEKGGQAFPVRVQSVGGGHRKKKMSPPCISIHPPCEREHPQIASP
TNLADCSMLLRRRTPSYDLSPHTQDASADSQTRTQMHSPMHTPLHTPLHAPLQAHSPTRT
LTASRASTPTHTPPHSSTPTPPHIPISPNIFIQPHAPLVPRPFSQTHSLSPAARHSSLTG
EYIPIPQFTFDQPQSRYMSGLSAGLSDADTATCSSPFDNRLGGGAGFSAKNRRTAQ
NT seq
7551 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagtgcgctttcagtacgcagagagcccggaggggcaggag
gaggcgcgggaggaggtgaggctcgctataccgacgccctgcaggaccgacgccccgggt
catgatgctgaccctggaggaggccgggatgaggaggaagaagaggaggtggagaggacg
aggaggaggaggggtaccggtcggggagatggagcggaatggagtcctgaggttcaggag
cacgaagaccaggaaccagagctggaggtggaaactggaccgacattgggagttcgcatc
agggctcctattcgggaccctgactgtgtgtcggaggaggaggagcagcagccgtacccg
ggcctgacccccgtggccttcttctgcttgaagcaaaccacgaggcctcgcaactggtgt
ctccgcgtcgtctgtaacccgtggttcgagcacgtgtccatgctggtcatcctgctcaac
tgcgtcactctggggatgttccagccctgcgaagacgtcgcctgtcagttggagtggtgc
cgaatcctagaggtattggacgactgtatctttgctttctttgccgtggagatggtcatc
aagatggttgccctgggaatttttggccccaattgttaccttggcgacaagtggaaccag
cttgacttcgtcatcgtcatggcaggggtgatggagtattctctggacggacataatgcc
agtctgtcagccatccgtaccgtccgagtgctccggcctctgcgggccatcaacagagta
ccaagtatgcggatcttggtgacattgctgttggataccctgcccatgctgggaaacgtc
ctcctcctctgcttctttgtcttcttcatctttggcattgtgggagtccagctgtgggcg
ggacttctgcgcaaccgctgcttcctggaagaggacatcataacaatgtacaacttgtcc
ataagtccttactacatgtcggaggaaggtgaagacagcccattcatctgctcggctccc
cgagagaacgggatgctgcgctgcaacagcgtgccgccccacgcagagggcggggccaac
tgcatggccggcctgcccccaagttcggctctgattggaagtgttaacggctgcattaac
tggaaccagtactataatgtttgtaaacccggggacctcaaccctcacaagggagctgtc
aactttgacaatatcggctacgcctggatagccatattccaggtcatcactctggaagga
tgggtagatatcatgtactatgtcatggacgctcactccttctacaattttatatatttt
atactgctcattatcgtgggctctttcttcatgatcaacttgtgcctcgtggtcatcgcc
acccagttctccgagacaaagcagagggagaacgccctgatgagggagcagcgcgctcgc
tacatgtccaacgactccacgctcgccagctacagcgaaccaggctcgtgctacgaggag
atgctgcgctacatcagccacctttatcgcaagttcacacgcagactgcagaggatatac
tctggatggcacagtaaaaggcgtaaaaaggtgaatcctaacggcagtggcggaggcagc
aacggcgggggtaacggacacggacacggctccagcagaggctgtggaggcctgggcccc
ggcagcgcgttgtggttgagaccgatccacaacctcctgcagcaccatcagcaccagcac
tgtcgcctcagcaacggggggcagcacaccaccagcgcggcgaccaccaccgagcgtacg
gacggagagggaggggaggagctggagatgaagtcgcttcctgctcggagaggaagtaca
aacaggaacggcggcgaggcgtccggcgtcgcccaaggcatgggggcgctgctgggccgg
ctgaacggggggatgaactatcccaccatactgccctcgtttgtgtgcagctacagcagc
aagacgccgcccccatccaagcagtgcgggccaagtccagagcagcacccgccgaaccac
ccggcatccgaacacacagagacactgaacaagctctaccagctcatgggacagcacagt
cgccagaggctactgtaccagctggcgggcgtggtgcccagccctctgctcctggagctg
ctcagctgcccaatgtgtgcccgcagcctggagaccctggagctggagctgggagacctg
gagggaggcaggggagaggctgacggactgcacgacttcccccaggggggagatctgaga
ggcaggcgaggtcggagccgacggcgaggggtcagggagtacaagaacggagtggtccgg
gcctgggtggccttcagggacaaactgaaaaggattgtggaaagcaaatacttcaaccga
gggatcatgatcgccatcctcgtcaacactctcagcatggggatcgagtaccacgagcag
cccgaggagttgactgacgtgttggagatcagtaacatcgttttcaccagcatgttcgtc
ctggagatgggcttcatgatgctggcttttggcttttttggatacatcaggaacccatac
aacatcttcgacagcgtcattgtgatcatcagtgtgtgggagataatcggtcaagcagac
ggcgggttgtcagtcctgcgaacatttcgtctgcttcgggttctgaagctggttcgcttc
ctgcccgccctgaggagacaactggtggtgctgatgaagaccatggacaacgtggccacg
ttctgcatgctgctgatgcttttcatcttcaccttcagtattctgggtatgcatctgttt
ggctgtaaattcagtgtgaggatggagaacggagacactatccccgaccgcaagaacttt
gactctctgctctgggccatcgtcactgtattccagattcttacccaggaggactggaac
gtggtgttgtataacggcatggcttccacctctccatgggcggcgctctactttgttgct
ctcatgacttttggcaactacgtgctcttcaatttactcgtagccatcttggtagagggc
ttccaggctgagggtgatgctaatcggtcggagtcagatgacgagaagaaatcggacaac
ttctccgaggacgagaaggtagaacagctcagagacactgagctaaaaatgtactccctg
atgatgaccgccaacggtcacgttgacccgcgaggctcgatggctcctcctataatcatg
cgtacggcagccactcctatgccgacccccaagagctctctgggaccggagtcggtcctc
gaagaggagctcatgtacagggagggggtgcctcagtacggcgaggtgggactggggttt
tccgatgtgggaagcatccatgcagagtctcgccgtggaagctccacctccatggaccct
ttagcctatgaccagcattctctgggcctctcgagtcccggccggcgctcccctcttcct
ccccgctcatggggaagccggcgctccagctggaacagtctgggaagagcaccgagcctc
aaacggcgagacaccagcggggagagagagagcctgttgtccggggaggggggagaggag
gaagacggtcgggaggaaaagggggaagccggggtgaacaaccgactgcgacaggagtcc
ttggagctgctgcaggcgtccactctctgcccttccataataacggagtatggggactgt
aacggcaggaccctgacctatgaccccaccgtgaacgccgagcccaaggaagactccttg
aatgaggatgacatagacgaagacagttctttctggttgtggctgaaaaaagagattctg
aacatgaagcccctctggtgcaaagagcacgaagactggacgctgtatttgttctctcca
gagagcaaaatccgtgggtggagccaaagtgtgatctctcacaaactgttcgaccacatt
gttctggttttcatcttcctcaactgcatcaccattgctctggaaagacctgatataaag
atgcaaagcaatgagcgaaagtttctgagtgtgtccaactacgtgttcactgtgatcttc
ctggcggagatggccattaaggtcattgctctcggtttctgctttgggaagcagacttac
ctccagtccagctggaacgttctggatggtttgttggtgtttgtgtctctggtcgacatt
ctggtctctctggcttacaccggcggaaacaggatcctgggcatcctcagagtcctgcgc
ctgctacgaacactacgcccactgagggtgatcagccgagctccgggtttgaagcttgtc
gtggagacgctcatcacttctctcagacccatcgggaacatcgtcctcatctgctgcgcc
ttcttcattgtctttggcatcttgggggttcagctgttcaaagggaagttctaccactgt
gaaggtctggacatgaaaaacgtcaccaacaagtcggactgcctggagggccactaccgc
tggatacggaggaagtacaactttgacaacctgattcaggctctgatgtctctgtttgtg
ctgtcctgtaaggacggctgggtcaacatcatgtatgacgggctggacgcagtgggagtc
gaccaacagcctgtgaggaaccacaacccctggatgctgctctacttcatctccttcctg
ctcatcgtcagcttcttcgtcctcaatatgtttgtcggtgtcgtggtggagaacttccac
aagtgccggcaggaccaggaggaggaggaggctcgcctacgggaggagaagaggctcaaa
atgatagagaaaaagcgcaggagtaaggagaatgaaggggctgaggccaagcagaggccc
tactacgccgactactcccccctgcgtctgtacatccacacactgtgtaccagccactac
ctggacctcttcatcaccttcatcatctgcatcaacgtcttcaccatgagcatcgagcac
tacaatcagcctcagtatttagaggaggttctgaagtactgtaactacgtgtttacctgc
atcttcgtcgtcgaggccctgctcaaacttgcggcgttcggcatacaccggttcttcaaa
gacaggtggaatcagctggatattgctatagtggcgctgtccatcgtgggcatcaccctg
gaggagctggaaatgaacgcggctctgcccataaatcctaccatcatcagaatcatgaga
gtgctcaggatagcacgagtgctgaagctcctgaagatggccactgggatgcgatctctg
ctggatactgtcatgcaagcgctcccacaggttggaaatctcggcctcctcttcatgctg
ctcttcttcatctacgctgcactgggagtggagctctttggcaaactggagtgcactgaa
cagaacccatgcgagggtctgagtcgtcacgctacctttgagaacttcgggatggccttc
ctcacactgtttcgagtgtccacaggagacaactggaatgggattatgaaagacacgtta
agggagtgtcaacaaaacgagcgcaactgtctcccctacctgcctctggtctcgccaatc
tactttgtcacgtttgtgctcatggcccagtttgtgctggtcaacgtggtcgttgctgtg
ttgatgaaacatctggaggaaagcaacaaggaggctaaagaggatgcagagatggacgca
gagatcgccttggaaatggcgatggagagggaacgcaaattaagcgccacctcccacaac
agttcagcgggaggaacctacgttgggccgtgtccaaattcacctggacaggaggaagag
gagaagtatggggacttgctgtcgtcaaggaagatgtccgtatccaggatgcactctctg
cctaacgacagctacatgttccgacccgtgcggcctgccagcgccccctacgctttggag
gaggtagatctcagtccccaacacgagcattcaggctcactgacgtccgtccactctcag
ccatgtgaggatcgcgccctgctgcaggttccagacgtctcccccgttcaccctcagcag
cctccctccctcaccctgccccgcatcgccccgcccacgcccagcgcctccccgcgggcc
ctgcgcagacaggtggcggttaaactggactctgtggagtcccagaggtgtgagcaacag
gagaggcccaactctgtccatctgcctcccctttccccctctccctctcccctcatcata
cctccccccatcaccgctgcctcctcctccccctcctccccctccgccctctccctccta
ccctcttcccctcccgccttccctcctccctctccctcctctctgcatccgctgctctcc
tccccctcttccctccctcctacgccgtcttccccgtcgcttctcctccctccacctccc
ntcccccggctccccctgcgccccgccagcctgcggagacatcggccgccctctgctgtc
tccctccgtgacccggcggacgaggaggtgtaccacatcaccagctcggcctgccacggg
cggagggacgaggagggaggggggcaggagggcagggggaaggtcggccgtagccactcc
ctctccccttacgccaccccgcacgctctcaactccacctcctcaccctctcctcccccg
ctgccgccctcctcctcgaggagcgtgctcagtctgctcggggcgggactgacggaccga
gactttaagaagggtttgagcgttgacaaccaggccttcccggacaaaccgtcatccctc
tccgccggttaccctgacgaccagcggcgccactccatcgaggtctgcctcccacaggcc
ttcatctccaactacgaccaacacttcgcgcgtgaggcccaccggtcggagaaaggtggt
caggcgtttcctgtgagggtgcagtcggtcggcggcggccacaggaagaagaagatgagt
cctccttgtatttccatccacccgccctgtgagagggaacaccctcaaattgcctcgccc
acgaacctggctgactgcagcatgctgctgagacgcaggacgccgtcctacgacctgagc
ccgcacacgcaggacgcctctgcagattcacagactcgcacgcagatgcactccccgatg
cacacgccgctccacacgccgctccacgcgccgctgcaggcgcactcgccgacgcgaacg
ctgacggcctcgcgggcgtccacgccgacacacactccacctcactcatccacacccacg
cctccacacatcccgatcagcccgaacatcttcatccagccgcatgcacctctcgtcccg
aggcctttctcgcagacgcactccctctcccccgcagcgaggcactcctcgctcacgggg
gagtacatcccgatcccccagttcaccttcgaccaaccacagtccaggtacatgagcggc
ctgtcagctggcctatcagacgccgacacggccacctgttcttcacccttcgacaacaga
ctgggaggcggtgcgggattcagtgcaaagaatcggaggaccgcccagtga
DBGET
integrated database retrieval system
