Anoplopoma fimbria (sablefish): 129099230
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Entry
129099230 CDS
T09102
Symbol
cacna1db
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04218
Cellular senescence
afb04260
Cardiac muscle contraction
afb04261
Adrenergic signaling in cardiomyocytes
afb04270
Vascular smooth muscle contraction
afb04530
Tight junction
afb04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129099230 (cacna1db)
04020 Calcium signaling pathway
129099230 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
129099230 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
129099230 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
129099230 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
129099230 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
129099230 (cacna1db)
04270 Vascular smooth muscle contraction
129099230 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129099230 (cacna1db)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129099230 (cacna1db)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129099230
NCBI-ProteinID:
XP_054464357
LinkDB
All DBs
Position
12:762354..801540
Genome browser
AA seq
2054 aa
AA seq
DB search
MALFFAVCLLLSGALLCCHDISVTALLSLSFPFPSSIRLFSVVLEMITKDADSGGQSGGK
PGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGL
ELFIGKMHATCYVIPVTGALAEEEPTPCAVSGHGRHCLLNGTSCREGWQGPNNGITNFDN
FLFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEF
SKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGDEEGKRNPSMPSE
TESANIENHKGEENKSPCCGPLCQKITKSKFSRQWRRWNRFCRRKCRAAVKSVTFYWMVI
ILVFLNTLTIASEHYNQPDWLTEVQDVANKVLLAMFTLEMLVKMYSLGLQAYFVSLFNRF
DCFVVCGGIVETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSI
ASLLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTV
MYDGIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEE
AKKRKNSAKDMNTDKKRVEIMDVKDGEIKVPAEVLLEEDKESYSAIDSPACDDDDDNGIL
PDVPPGPRPQRLSELTIKEKTPPIPTGSAFFIFSSTNPFRVFCHKLINHQIFTNLILVFI
MLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEILLKILGYADYVFTSMFTFEILI
KMTAFGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAIN
RAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPEDCK
GTYILYNNGDTALPMVKDRIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRE
NMGPIYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCV
EYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYA
MDILNMVFTGVFTVEMILKLIAFKPRGYVGDAWNVFDALVVIGSVVDIILSQNYFADAWN
TFDALIVVGSVVDIAITEINSAAIPVVKVIVEPGNTEDSARISITFFRLFRVMRLVKLLS
RGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQT
FPQAVLMLFRCATGEAWQEIMLACLPGKLCDSESDYNPGEERTCGSGFAIIYFITFYMLC
AFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRR
IQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANE
ELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGRR
SWERLNTTMALQAGLRTLHDIGPEIRRAISCDLQEAGLVEANGEEEEEIYRRNGGLFGNH
VSADQQGYFHPTTVTQRPLQILPFSSSASNEPTQTGRTASEADGGEETEMNSSPIQYNHH
YHTPHPHNYPHCVPACHQSPIPSNANLNNANVPSLLSMTNGRQQKCLLRGDRPSSTKNGS
SASTHRKGVHDRLWKSHSTRTRYYEAYIRSETGGGLYSTIRREEPGGGDSDDERGSGEYF
SGEEFHEDGIMLTKDRLSNKDDHDAEVDFDLGVSRSDQKPDGYFDDDQQPIYQDGRRSPR
RWLLPSPQASNRPTFSFECLRRRSSQDDAPLSPSCTALPLHLVQQQVMAVAGFDASRIHR
LSPTRSLCSWVTPPASPISRECLPSYTPLIQVDWRSPGSVSSIPGAVKRSSWYTDGQDSP
HSRSHSPSLLQLPAECCSHKLQKRGSANSVVEAVLISEGLGKYARDPKFVSATKHVIADA
CEMTIDEMESAASNLLNGSMDNSNTGGTGSVGSDPNATEHLRDCSIRDYSDEEPYVALKC
EEDLADEMICITSL
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttttttgctgtctgcctcttgctttcaggtgctttgctctgttgtcatgac
atctctgtcactgctctcctctcactctctttcccgtttccctcttccatcaggttgttc
agtgtggttctggagatgataaccaaagacgctgactctggcggccagtctggaggcaaa
cccggggggtttgatgtcaaggccctccgagcttttcgcgtgcttcgtccccttcgcctt
gtctctggagttcctagtttacaggtggttttaaactccattattaaagccatggttcct
ctgcttcacatcgctctgctggtcctctttgtcattatcatctacgccatcatcggcctg
gagctcttcattggcaaaatgcatgcaacatgctacgtgataccagttacaggtgccctc
gcggaagaagagcccacgccgtgtgcggtttcaggtcacggccgccattgtctgctcaat
ggtacgtcttgcagagagggctggcaaggccccaacaacggcatcaccaacttcgacaac
tttttgtttgccatgctcactgtgttccagtgcatcaccatggagggctggaccgacgtt
ctctactggatgaatgatgcaatgggctttgagctgccctgggtctactttgtcagtctg
gtcatctttggatccttctttgttctcaacttagttctgggtgtgttgagcggagagttt
tccaaagagcgagagaaggccaaggctcggggagatttccagaagctgcgtgagaagcaa
cagttagaggaagacctgaaaggctacctggactggatcacccaggctgaggacatcgac
cccgagaacgaggaggagggggacgaggagggcaagcgtaacccgagcatgcccagtgag
acagaatcggcaaacatagagaatcacaagggagaggaaaacaaatcgccctgctgtggg
ccgctatgtcaaaaaattactaagtcaaagttcagtcgtcagtggcgacggtggaaccgt
ttctgccgcagaaagtgtcgagcagccgtgaagtctgtgacgttttattggatggtcatc
atcctggtgttcctcaacacactcaccattgcctctgagcactacaaccagccggactgg
ctcaccgaagtacaggacgtagccaacaaagttctcctggcgatgttcaccttggagatg
ctagtgaagatgtacagtctggggctgcaggcgtacttcgtgtccttgtttaaccgcttt
gactgtttcgtggtgtgcggaggcatcgtagagaccatcctggtggagctggccatcatg
tctccgctgggcatctctgttttccgttgcgtacgactccttaggatcttcaaggttaca
cgtcattgggcgtccctcagtaacctcgtggcctctctgctcaactccatgaagtccatc
gcctccctgttgctgctgctcttccttttcatcatcattttctccctgctcggcatgcag
ctttttgggggcaagtttaattttgacgagactgtgaccaaaaggagcacgtttgataac
ttcccccaggccctgctcactgtgttccagattttgacaggagaagactggaacacggtg
atgtatgatggtatcatggcgtacggcggtccggcctcctctgggatggtggtctgcatt
tacttcatcatcctcttcatctgtggaaactacatcctgctaaacgtcttcttggccatt
gccgttgacaacctggcagacgcggagagcctcaacacagcacagaaggaggaagaggag
gccaagaagagaaagaatagtgccaaggatatgaacactgataagaagagagttgaaata
atggacgtcaaggatggagagatcaaggtgccagcagaggtcttgctggaggaagacaag
gagtcgtattctgccatcgactctccagcttgtgatgatgacgacgataacggcattctc
ccagacgtcccgccaggtccccgtcctcagaggctgtctgaactcaccatcaaagaaaag
actccgcccatcccgacgggcagcgcctttttcatcttcagcagcactaacccgtttcgt
gtgttctgccataagctgatcaaccatcagatcttcaccaacctaatcctggtcttcatc
atgctcagctccgtctctctggctgctgaggacccaatacgtaacttctctgctcgcaac
atcatacttggttattttgactatgctttcaccgcaatctttactgttgagatcctgttg
aagatcctaggctatgcagactatgtcttcactagtatgtttacatttgagatccttatt
aagatgacagcgtttggagcgttccttcacaaaggggcgttttgtagaaactacttcaac
ctattagacctgctggtcgttggtgtgtctctggtctcctttggcatccagtcctctgct
atttcagtggtgaagattctccgtgttttgagagtcctccgtccgctcagggccatcaac
agagccaagggactgaagcatgtggtccagtgtgtttttgtggccatcaggaccatcggc
aacatcatgattgtcaccacgctgctgcagttcatgttcgcttgtatcggagtgcagctc
ttcaaggggaaattttatcgctgcacagatgatgccaagtccagtccagaagactgcaag
ggtacctacattctctacaacaacggggacacggcgctacccatggtgaaggacaggatc
tggtacaacagcgacttcaactttgacaacgtcctcatggccatgatggctctttttact
gtctccacatttgaagggtggcccactctactctacaaggccatcgactctaacagagag
aacatgggtcccatctacaactaccgcatcgagatctccattttcttcatcatctacatc
atcatcatcgccttcttcatgatgaacatcttcgttggtttcgttatcgtgacctttcag
gagcagggcgagaaggagtacaagaactgcgagctggacaagaaccagcgtcagtgtgtg
gaatatgctcttaaagctcgtcctctgcggcgctacatccccaaaaacccttaccagtac
aagttctggtatgtggtcaactctactggctttgagtacgtcatgtttgtcctgatcatc
ctcaacaccttgtgtctggccattcagcaccacggtcagtctcatctgtttaactatgcc
atggacatcctcaacatggtcttcacgggtgttttcactgtggagatgatcctcaagctc
atcgccttcaaacccagaggctatgtcggggacgcctggaacgtcttcgatgccctggtc
gtgattggcagtgtagtcgacatcatactcagccagaactattttgctgatgcatggaac
acgtttgatgccttaattgttgtgggtagcgtggttgacattgccatcactgagatcaat
tcagcagccattcctgtcgtcaaggtgatagtggagccagggaacacagaggacagcgct
cgcatctccatcaccttcttccgcctgttcagagtgatgcgattggtcaaacttctgagc
aggggggagggcatcaggactctgctgtggaccttcatcaagtctttccaggctcttccc
tacgttgcactcctgatagcaatgctgttcttcatctatgctgtaattgggatgcaggtg
tttgggaaaatagccatggtggatggaacacaaatcaaccgtaacaacaactttcaaacc
tttcctcaagctgtcctgatgctcttcaggtgtgccacaggtgaggcctggcaggagatc
atgctggcatgtctgccagggaagttgtgcgactccgagtcggactacaaccccggagag
gagagaacttgcggcagtggcttcgccatcatctactttatcaccttctacatgctctgt
gctttcctgatcatcaacctgtttgttgctgtcatcatggataactttgactatctgacc
cgcgattggtccattcttgggccgcatcaccttgatgagtttaaaaggatctggtccgaa
tacgaccctgaagcaaagggccggataaagcacctcgatgtggtgactcttctgaggagg
atccagcctccactgggctttggcaagctctgccctcacagagtggcctgtaagcgtctg
gtagcgatgaacatgcccctcaacagcgatgggacagtcatgttcaatgccaccttgttt
gctctggtccgcaccgctctcaagattaagactgagggtaatctggagcaggccaatgag
gagcttagagctgtgattaagaagatctggaagaggaccagcatgaagctgctggaccaa
gtagtgccccctgcaggcgatgacgaggtaacagtggggaagttctatgccaccttcctg
atacaggactacttcaggaagttcaagaggcgcaaagagcaaggtcttgtaggaaggcgc
tcgtgggagaggctgaacacaaccatggctctacaggcaggcctgcggacgctgcatgac
attggaccagagatccgtcgagccatatcatgcgacctgcaggaggcggggctagtagag
gctaacggagaggaagaagaggaaatctacaggcgtaacggtggtctctttggtaaccat
gtcagtgctgatcagcaaggctactttcacccgaccactgtcacccaacggccgctacag
atccttcccttctcctctagtgcctcgaatgaacccacccaaacaggcaggacagccagc
gaggccgacggaggagaggagacggagatgaactcttcacccatccagtataaccatcac
tatcacacccctcatccacataactatcctcactgtgttcccgcttgccatcaatcgcca
ataccctccaatgccaacctcaacaatgccaacgtgccctcacttctctccatgaccaac
gggaggcagcagaagtgtttgttaaggggagaccgtccgtcctccaccaaaaatggctca
tcagcgtccactcacaggaaaggagtacacgacaggctttggaagtcgcactccacaagg
acacgctactatgaggcctacattaggtcagaaacgggcggtgggctttactccaccatt
cgtcgagaggagccggggggtggagacagcgatgatgagagaggctcgggagagtacttc
agcggggaggagtttcacgaagacggcatcatgctcacaaaggacaggttgtccaacaaa
gacgaccatgatgcagaggtagactttgaccttggggtttccaggagtgaccaaaagcct
gacggttactttgatgatgaccaacagccgatctaccaagatggcaggcggtcacccagg
aggtggcttttaccctcacctcaagcttccaacagaccaacattcagttttgagtgtctt
cgcagaagaagtagtcaggatgacgcccctctctctccatcctgcacagctcttccacta
cacctggtgcagcaacaggtgatggcggtggccggtttcgatgcgagcagaattcaccgt
ctgtctcctacacggtcactttgctcctgggtcacgccccctgcctcccccatcagccgc
gagtgcttaccatcctacacaccactgatacaggtggactggcgcagccccggcagcgtc
agcagcatccccggagcagtgaagaggagttcgtggtacacggacggccaggacagtcct
cacagccgcagccactctccgtcacttctgcagttacctgctgaatgctgctcacacaaa
ctgcagaagagaggcagcgccaacagtgtggtggaggctgtgttgatctctgagggtctg
gggaaatacgccagggaccccaagtttgtgtcagcgaccaaacacgtaatcgcagacgcc
tgcgagatgaccattgatgagatggagagtgccgccagtaacctgctgaacgggagtatg
gataacagcaacactgggggaactgggagcgtcggctcggacccaaatgccaccgagcat
ctcagagactgcagtatccgtgactacagcgacgaagagccgtacgtggctctgaaatgc
gaggaggacctagcagacgagatgatatgcatcacgtcgctatag
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integrated database retrieval system
