Anoplopoma fimbria (sablefish): 129099261
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Entry
129099261 CDS
T09102
Name
(RefSeq) intermediate filament protein ON3-like
KO
K07605
type II keratin, basic
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129099261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129099261
04147 Exosome [BR:
afb04147
]
129099261
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
129099261
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
129099261
Exosomal proteins of other body fluids (saliva and urine)
129099261
Exosomal proteins of colorectal cancer cells
129099261
Exosomal proteins of bladder cancer cells
129099261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
ADIP
DUF4924
CCDC113_CCDC96_CC
ATG16
TSNAXIP1_N
BRE1
PUMA_CC
TolA_bind_tri
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
129099261
NCBI-ProteinID:
XP_054464405
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All DBs
Position
12:6268074..6272687
Genome browser
AA seq
563 aa
AA seq
DB search
MSMSSFSSSGGGGGGIGGGGGGGRSYSSRSMVVRSGPRMSSGMSMSKQSIGGGGYGFASG
GGGGFSSGSSFGGGGGYGSGGGGGYGSGGGFGGGGGGFGGGGGFGGGGGFGGGMIAPITA
VQCNQSLLSPMNIDIDPNIQTVRTHEKEQIKTLNNRFASFIDKVRFLEQQNKMLETKWSL
LQDQTTTRSNIDAMFEAYIANLRRQLDGLGNERVKLEGELRNMQGLVEDFKCKYEDEINK
RASVENEFVLLKKDVDGAYMNKVELEAKVDSLQDEINFLRAVFEAELRELQGQIKDTSVI
VEMDNSRNLDMDSIVAEVKAQYETIANANRAETEQWYQQRFQEMQTNAGQAGDDLRSSKS
EIAELNRMISRLQNEIEAVKGQRVNLEAQIAEAEERGELAVKDAKARIRDLEDALQRAKQ
DMTRQVREYQDLMNIKLALDIEIATYRKLLEGEELRINTGGGSATIHIQSSSSGGGGGGG
GGYGGGAGGGGFGIGYGGGAGGGYSSGGGSSFSAGGSSFSSGGGYGGSMSGGGYGGCVDM
RSGGGGAIISKMSSSSSSSQRRF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgagtagcttcagtagtagtggtggtggtggtggtggtattggcggcggcggc
ggcggtggccgatcttactcctcaagatcgatggttgtcagatcaggaccgaggatgtca
tccggcatgtcaatgagcaagcaaagcatcggtggtggcggctacggttttgcctctggt
ggtggaggtggtttcagtagtggaagtagtttcggtggtggtggtggttacggcagcggc
ggcggcggtggttacggcagcggcggtggtttcggcggcggcggcggtggtttcggcggc
ggcggtggtttcggcggcggcggtggtttcggcggcggcatgatcgcacccatcacagcc
gtccagtgcaaccagagcctgctgtcccccatgaacattgatatcgaccccaacatccag
accgtccgaacccatgagaaagagcagatcaagactctaaacaaccgcttcgccagcttc
attgacaaggttcgcttcctggagcagcagaacaagatgcttgagaccaagtggagcctg
ctgcaggatcagaccaccacccgctccaacattgacgccatgtttgaggcctacatcgcc
aatctgcgcaggcagctggatgggctcggcaacgagagggtcaagctggagggagagctg
aggaacatgcagggcctggtggaggacttcaagtgcaaatatgaagatgaaatcaacaag
cgtgccagcgtggagaacgagtttgtgcttctcaaaaaggatgtagatggcgcctacatg
aacaaggttgagctggaggccaaggtcgactcccttcaagatgagatcaacttcctcaga
gccgtctttgaggcggaactgcgtgagctccagggacagatcaaggacacctcagtcatt
gtggagatggacaacagccgtaacctggacatggactccattgtggctgaagtcaaggct
cagtatgagaccatcgccaatgctaaccgtgcagagactgagcagtggtatcagcagagg
ttccaggagatgcagaccaatgcaggccaggccggagatgacctccgcagttccaagagt
gagattgctgagctcaaccgcatgattagccgcctccagaatgagattgaggcagtcaag
ggacagcgcgtcaacctggaggcccagatcgctgaggcagaggagcgcggtgagctggcc
gttaaagacgccaaggcccgcatcagggatctggaagatgccctgcagagagccaaacag
gacatgacccgccaagtccgcgaataccaggacctgatgaacatcaagctggctctggac
attgagatcgccacctacaggaaactgctggaaggagaggaattaagaatcaacactggc
ggtggatctgcaaccatccacattcagagctcaagctccggtggaggcggaggtggaggc
ggcggctatggcggcggtgccggtggcggcggttttggcatcggctatggcggcggtgcc
ggtggcggctatagcagcggcggtggcagcagctttagcgccggtggcagcagctttagc
agcggcggcggctatggaggcagcatgtcagggggaggctatggaggatgcgtggacatg
cgtagcggcggcggcggcgccatcatttcaaaaatgagcagcagcagcagcagctcacaa
cgccgtttttaa
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integrated database retrieval system
