Anoplopoma fimbria (sablefish): 129099354
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Entry
129099354 CDS
T09102
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129099354 (sort1b)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF4988
Motif
Other DBs
NCBI-GeneID:
129099354
NCBI-ProteinID:
XP_054464540
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Position
12:11818719..11831109
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AA seq
820 aa
AA seq
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MGLLLRSILLLSLTTFAACIDFQQGSKPFAQSFLRRSNIEEKAANIIKRSLPAWLSASPK
HEIKRRSAEQGDTCKALQGYDTKLADNTHSYTFNDLSGSVSLAWVGDGTGVILALTTFQV
PFFMIRLGQSKLYRSENYGKSFEDVTNLINNTFIRSEFGIAIGNSGKVILTGEVSGGYVS
RLFVSNDFGKSFTPRDLTFTPQSQITYNPDNSNVLLALSNSYELWLSEDVGTNWKKIHDM
VCLVKWGRKNTIFFTANHNGSCSDRGMLELKRTTDYGKNIKTVASKIYSFGQGGRFLFAS
VMTGKGTLRMIHVSVDQGETWNMAQLPPVGHEQFYSILAANDEMVFMHVDEPGDTGFGTI
YVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSVLAEDNSVQSVVSFDQGGE
WVPLRKPANTKCDATAKDPDKCSLHIHAAYSTAMRLNIPMLPLSEPNAVGLILAHGSVGD
SISVMKPDVYVSDDGGYTWIKALVGPHHYAILDSGGLLVAVEQSPTQPINTIKFSTDEGQ
CWRVYNFTKDPIYFTGLASEPGARSMNVSVWGYRDSLLSQYWISTTIDFRELLTRDCGDT
DYVQWLAHSDDISDPKDGCMLGYKEKFLRLRKDSVCWNGRDYQVNTEPTLCQCTLDDFLC
DFGYYRQENSSECVEQPDLKGKVLEFCLQGKEELLQTSGYRKIPGDKCEGGKMPERKEID
LSKRCVSDLVAPELLIDTRSSKSVAIVVTVIIIMLLSIAAGVVFVKKYVCGGRFLVHRYS
VLQQHVEDNAVDGMDDPLETNHTQNGKIEFHDDSDEDLLE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggactcttgctgcgctccatactgctattatctcttaccactttcgcagcctgtata
gattttcagcagggatccaaacccttcgcacagtcgtttctgaggcgttcaaacattgaa
gagaaagctgcaaacatcataaagagatctctgcccgcatggctgtctgcatcaccaaag
cacgagataaaacggaggagcgcagagcagggcgacacctgcaaagctcttcaaggatac
gacaccaagttagcagacaacacccacagttataccttcaatgacctgagtgggtcggtg
tcgctggcctgggttggagacggcacaggggtcatcctggctttgacgacttttcaggtg
cccttcttcatgataaggctcgggcagtctaaactctatcgaagtgagaactatgggaag
tcattcgaggatgtgaccaatctcatcaacaacaccttcatcagatcagagtttggcatt
gctattgggaactctgggaaagtgatcctgacgggagaagtgtccggaggttacgtgtct
cggctcttcgtctccaatgactttggaaagagtttcaccccccgggacctgaccttcacc
ccccagtcgcagatcacatacaaccctgataattccaatgtgctgctggccctcagcaac
agctatgaactgtggctgtctgaagatgttggcaccaactggaaaaagatccacgacatg
gtgtgtcttgtgaaatggggaaggaaaaacaccatcttctttacagccaatcacaacgga
tcctgcagtgatcggggaatgctggaactgaagaggacaacggactacggtaaaaacatc
aagactgtcgccagtaagatctactccttcggccagggtggacgcttcctgtttgcctct
gttatgacaggcaagggcactctgaggatgatccatgtgtcagtggaccagggtgagacc
tggaacatggcacagctgccccctgttggccacgagcagttctactccatcctggcagca
aacgatgaaatggtcttcatgcatgtggacgagccaggagatacaggatttgggaccatt
tatgtatcagacgaccggggcactgtgtactccaagtcattggagcgccacctttacacc
accacggggggcgataccgacttcactaacgtcacctccctgcgaggagttttcatcacc
agtgtcctagcagaagataactctgtgcagtctgtggtgtcctttgatcagggaggagaa
tgggttcccctgcggaaacctgccaacaccaagtgtgatgctacagccaaagacccagac
aagtgcagtctccacatccacgccgcctacagcactgctatgaggctgaacatccccatg
ctgcctctgagtgaaccaaacgctgtgggtctcatcttagctcatgggagtgttggtgat
tcgatctcagtgatgaagcctgatgtttatgtgtctgatgatggggggtacacctggatt
aaggccctggttgggccccatcactatgctattctggactctggtgggctgctggttgcc
gtggagcaaagccccactcaacctatcaacacgatcaaattttctactgatgaaggacag
tgctggcgtgtttacaacttcaccaaagaccccatctactttactggactggcatcagag
ccgggagctcgctccatgaatgtcagtgtctggggttacagagactccctcctcagccag
tactggatctccaccactattgacttcagggagcttctcaccagagactgtggcgacacc
gattatgtgcagtggttggcccactcagatgacatcagtgaccccaaggatggttgcatg
ctgggctacaaggagaagttcctgcgtctcaggaaggactctgtttgctggaacggacga
gactaccaggtcaacaccgagccaaccctgtgtcagtgcaccctggatgacttcctgtgt
gactttggatattaccgtcaggagaacagctcggagtgtgtagagcagccagacctgaaa
ggcaaagtgctggagttctgtctgcaaggcaaagaggagctactgcagaccagtggctat
agaaaaatccctggagataaatgtgagggaggaaagatgcccgagcgtaaagagatcgac
ctcagcaagaggtgtgtgagcgacctggtggcccctgaactcctgatagacactcgctcc
tccaagtctgtagccattgtggtaacagtcatcatcatcatgctgctgagcattgcagca
ggagtcgtcttcgtcaagaaatatgtctgtggtggcaggttcctggttcacaggtactcg
gtgctgcagcagcatgtcgaggacaatgctgttgatgggatggatgacccgctggagaca
aaccacactcaaaatggcaagatagagtttcacgacgactcagatgaggacctgctggaa
tag
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