KEGG   Anoplopoma fimbria (sablefish): 129099354
Entry
129099354         CDS       T09102                                 
Symbol
sort1b
Name
(RefSeq) sortilin 1b
  KO
K12388  sortilin
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04142  Lysosome
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    129099354 (sort1b)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 DUF4988
Other DBs
NCBI-GeneID: 129099354
NCBI-ProteinID: XP_054464540
LinkDB
Position
12:11818719..11831109
AA seq 820 aa
MGLLLRSILLLSLTTFAACIDFQQGSKPFAQSFLRRSNIEEKAANIIKRSLPAWLSASPK
HEIKRRSAEQGDTCKALQGYDTKLADNTHSYTFNDLSGSVSLAWVGDGTGVILALTTFQV
PFFMIRLGQSKLYRSENYGKSFEDVTNLINNTFIRSEFGIAIGNSGKVILTGEVSGGYVS
RLFVSNDFGKSFTPRDLTFTPQSQITYNPDNSNVLLALSNSYELWLSEDVGTNWKKIHDM
VCLVKWGRKNTIFFTANHNGSCSDRGMLELKRTTDYGKNIKTVASKIYSFGQGGRFLFAS
VMTGKGTLRMIHVSVDQGETWNMAQLPPVGHEQFYSILAANDEMVFMHVDEPGDTGFGTI
YVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSVLAEDNSVQSVVSFDQGGE
WVPLRKPANTKCDATAKDPDKCSLHIHAAYSTAMRLNIPMLPLSEPNAVGLILAHGSVGD
SISVMKPDVYVSDDGGYTWIKALVGPHHYAILDSGGLLVAVEQSPTQPINTIKFSTDEGQ
CWRVYNFTKDPIYFTGLASEPGARSMNVSVWGYRDSLLSQYWISTTIDFRELLTRDCGDT
DYVQWLAHSDDISDPKDGCMLGYKEKFLRLRKDSVCWNGRDYQVNTEPTLCQCTLDDFLC
DFGYYRQENSSECVEQPDLKGKVLEFCLQGKEELLQTSGYRKIPGDKCEGGKMPERKEID
LSKRCVSDLVAPELLIDTRSSKSVAIVVTVIIIMLLSIAAGVVFVKKYVCGGRFLVHRYS
VLQQHVEDNAVDGMDDPLETNHTQNGKIEFHDDSDEDLLE
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgggactcttgctgcgctccatactgctattatctcttaccactttcgcagcctgtata
gattttcagcagggatccaaacccttcgcacagtcgtttctgaggcgttcaaacattgaa
gagaaagctgcaaacatcataaagagatctctgcccgcatggctgtctgcatcaccaaag
cacgagataaaacggaggagcgcagagcagggcgacacctgcaaagctcttcaaggatac
gacaccaagttagcagacaacacccacagttataccttcaatgacctgagtgggtcggtg
tcgctggcctgggttggagacggcacaggggtcatcctggctttgacgacttttcaggtg
cccttcttcatgataaggctcgggcagtctaaactctatcgaagtgagaactatgggaag
tcattcgaggatgtgaccaatctcatcaacaacaccttcatcagatcagagtttggcatt
gctattgggaactctgggaaagtgatcctgacgggagaagtgtccggaggttacgtgtct
cggctcttcgtctccaatgactttggaaagagtttcaccccccgggacctgaccttcacc
ccccagtcgcagatcacatacaaccctgataattccaatgtgctgctggccctcagcaac
agctatgaactgtggctgtctgaagatgttggcaccaactggaaaaagatccacgacatg
gtgtgtcttgtgaaatggggaaggaaaaacaccatcttctttacagccaatcacaacgga
tcctgcagtgatcggggaatgctggaactgaagaggacaacggactacggtaaaaacatc
aagactgtcgccagtaagatctactccttcggccagggtggacgcttcctgtttgcctct
gttatgacaggcaagggcactctgaggatgatccatgtgtcagtggaccagggtgagacc
tggaacatggcacagctgccccctgttggccacgagcagttctactccatcctggcagca
aacgatgaaatggtcttcatgcatgtggacgagccaggagatacaggatttgggaccatt
tatgtatcagacgaccggggcactgtgtactccaagtcattggagcgccacctttacacc
accacggggggcgataccgacttcactaacgtcacctccctgcgaggagttttcatcacc
agtgtcctagcagaagataactctgtgcagtctgtggtgtcctttgatcagggaggagaa
tgggttcccctgcggaaacctgccaacaccaagtgtgatgctacagccaaagacccagac
aagtgcagtctccacatccacgccgcctacagcactgctatgaggctgaacatccccatg
ctgcctctgagtgaaccaaacgctgtgggtctcatcttagctcatgggagtgttggtgat
tcgatctcagtgatgaagcctgatgtttatgtgtctgatgatggggggtacacctggatt
aaggccctggttgggccccatcactatgctattctggactctggtgggctgctggttgcc
gtggagcaaagccccactcaacctatcaacacgatcaaattttctactgatgaaggacag
tgctggcgtgtttacaacttcaccaaagaccccatctactttactggactggcatcagag
ccgggagctcgctccatgaatgtcagtgtctggggttacagagactccctcctcagccag
tactggatctccaccactattgacttcagggagcttctcaccagagactgtggcgacacc
gattatgtgcagtggttggcccactcagatgacatcagtgaccccaaggatggttgcatg
ctgggctacaaggagaagttcctgcgtctcaggaaggactctgtttgctggaacggacga
gactaccaggtcaacaccgagccaaccctgtgtcagtgcaccctggatgacttcctgtgt
gactttggatattaccgtcaggagaacagctcggagtgtgtagagcagccagacctgaaa
ggcaaagtgctggagttctgtctgcaaggcaaagaggagctactgcagaccagtggctat
agaaaaatccctggagataaatgtgagggaggaaagatgcccgagcgtaaagagatcgac
ctcagcaagaggtgtgtgagcgacctggtggcccctgaactcctgatagacactcgctcc
tccaagtctgtagccattgtggtaacagtcatcatcatcatgctgctgagcattgcagca
ggagtcgtcttcgtcaagaaatatgtctgtggtggcaggttcctggttcacaggtactcg
gtgctgcagcagcatgtcgaggacaatgctgttgatgggatggatgacccgctggagaca
aaccacactcaaaatggcaagatagagtttcacgacgactcagatgaggacctgctggaa
tag

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