Anoplopoma fimbria (sablefish): 129099360
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Entry
129099360 CDS
T09102
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129099360 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129099360 (prdm16)
03036 Chromosome and associated proteins [BR:
afb03036
]
129099360 (prdm16)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
129099360 (prdm16)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129099360 (prdm16)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129099360 (prdm16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
C2CH-3rd_BIRD-IDD
Zap1_zf1
PRDM2_PR
zf-BED
zf-C2H2_8
zf-met
C2CH-4th_BIRD-IDD
DUF7128
SET
Motif
Other DBs
NCBI-GeneID:
129099360
NCBI-ProteinID:
XP_054464556
LinkDB
All DBs
Position
12:complement(9562377..9583295)
Genome browser
AA seq
1102 aa
AA seq
DB search
MGCVANSTGTEVLLQLEALRSAAQLSQLFRLTEKRKIYYKAVRDIEAGEELLVYMKDGIF
PEGSMAPNLQDEQMYRCEDCDELFSSTLELRRHQKYSCSSSGSIFDSLREDFKQEREDSD
EPVHECKDCEKIFPNEYSLGQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRF
ECENCDKVFTDPSNLQRHIRSQHVGARAHTCPECGKTFATSSGLKQHKHIHSSVKPFICE
VCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQLFSTTSSLNKHRRFCEGKNHYGSPAGM
FNPGIPLSSSPIMAKVKSHHHHLQGLNQSGLGFTDYFPSRPHPHAGLPFSPGAHGFPSLH
HGFPGIFSPSLYPRPPLLQATPLLKSPLGGSSQEVKLPRSPLDAPPMSLVSSTNTNGGNS
LNQLEVKEKENKLDLSSGEAKPKSKMADLSDGSDLEDVNTTSGTDLDTTTGTASGDGSDL
ESDGESERERSGKRRKPSGAISSQEGHQLEDTDSALMSAVSSSGNFAIDRPFQSSAPSQH
SFFPPPDEQALPPTHINANAATTDSIKAIASIAEKYFGPGLIGLHQEKKMGPLPYHSMFP
FQFLPNFHNSLYPFSADRGALNPSMFFKAEPKSPHEQLHKMMSGAPRAPASTGESPFDLT
TKAKETKSAHPSPTNPSNPKSSSGSSSGPLSIASGEEQPLDLSIGGRSRGGHNGVVAEPP
NRKNHIFGIGKGVSIKDETPVGFPQLHSQSLHQTSIAQHQQQHAQPHQPPPLHYAKPSAF
FMDPIYSRVEKRKLLDPVGALKEKFLRPSPPLFHPQMSAMENMTEKLESFGALKLDPPPN
SLQHAHPLFNFRSPPPSLSDAILRKGKERYSCRYCGKIFPRSANLTRHLRTHTGEQPYRC
KYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQS
GMLSNLGTTISSPNSEPDNHALLDEKEDSYFSEIRNFISNSEMNQASSSTDKRSDQAEEE
RPPSHSLSNSKLGLRGLEEEEEEVEGDDEEEEEGSLTEKSHDEAPESPSPVTTGVYEEDE
EEEETETAPLAMGYEHTRRLMQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgtcgccaactccaccgggaccgaagtgctactgcagctggaggctctccgc
agcgccgcgcaactttcgcaactattccgtctcacggagaaaagaaagatttattataaa
gctgtccgggacatcgaagcaggggaggagctcttagtgtatatgaaggacggcattttc
cccgagggatccatggcacccaacctacaagacgagcagatgtaccgctgtgaagactgt
gatgagctgttctcctcaacacttgagctgcggcggcaccagaagtattcgtgctccagc
agcggctccatctttgactcactgagagaggacttcaaacaggaacgtgaggacagcgac
gagcccgtccacgaatgtaaagactgtgagaagattttcccaaatgagtacagtctgggc
caacatatgatagtccatactgaggagagggagtacaaatgtgaccagtgccccaaagcc
ttcaactggaagtccaacctcatccgccaccagatgtcacatgacagtggcaaacgtttt
gagtgtgaaaactgtgataaggtgttcacagatcccagcaaccttcagcgtcacatccgc
tctcagcacgtgggggcacgcgctcatacatgccctgagtgtggcaagacctttgccacc
tcttcaggcctcaagcagcataagcacatccacagcagtgtcaaaccctttatctgcgag
gtgtgccacaaatcctacacccagttctccaacctctgccgccacaagcgtatgcatgct
gactgccgtacccagatcaagtgtaaggactgtgggcagttgttcagcactacctcctcc
ctcaacaagcatcgccgcttctgtgagggcaaaaaccattacggctctccagcagggatg
ttcaaccctggcatccccttgagctccagccccatcatggccaaggtcaagtcccatcat
caccaccttcaaggtctaaaccagtcaggtttaggcttcactgactactttccctcccga
ccccaccctcatgctggcttgcccttctccccaggagcccatggcttcccatccctccat
catggtttcccaggtatcttctctccatcactgtatccgcgaccacctttattgcaggct
acccccttactaaagagcccgctgggcggcagcagtcaggaggtgaaattgcctcggagt
cccctagatgcccctccaatgtccctggttagttccacaaacaccaatggaggtaacagt
ttgaatcagctggaagtcaaagaaaaagagaacaaactggatttgtcttctggagaagcc
aagccaaaatctaagatggcagacttgtctgatggtagtgaccttgaagacgttaatacc
acaagtgggacagatttggacaccaccactggtactgcttcaggtgatggttctgacctg
gagagcgatggagagagtgaacgtgagcgaagtggtaaaagaaggaagccgtctggggca
atatcaagtcaagaaggccaccagttagaagacacagacagtgcgttgatgtcagctgtg
tcaagttctggaaactttgctattgatcgtccctttcagtcttctgcaccatcccagcac
tccttcttcccaccgcctgatgaacaagccctgccgcccacccacataaatgcaaatgca
gccaccacagattctatcaaagccatcgcctctattgctgagaaatattttggtccaggt
ttaattggtctccatcaggagaagaaaatgggtccattgccctaccattccatgtttccc
ttccagtttctgcccaacttccacaactccctctatcccttcagcgctgatcgaggtgcc
ctcaatcccagcatgttctttaaggcagagcccaagtcacctcacgagcagctgcacaag
atgatgtctggtgcaccacgagctcctgcttccacaggagagtcaccatttgatctcact
acaaaggccaaggagaccaagtcagctcatcccagcccaacaaacccctcaaaccccaaa
agtagttctgggagcagtagtggacctttatcaatagctagcggggaagaacagccgttg
gacctgagcattggcggtcggagccgaggtggacataatggtgtagtggctgagccacca
aatagaaaaaaccacatctttggaattggaaagggggtctccatcaaggacgaaacccca
gttgggtttccacagctccattcccagtcgttgcaccaaacctccattgcgcagcaccag
cagcaacacgcacagccacatcagccaccacccctgcactacgccaagccctcagcattc
ttcatggaccccatatacagcagggtggagaagaggaagctactcgatcctgtaggagct
ctgaaggaaaaattcctcaggccctcaccaccactcttccatccacagatgtcagccatg
gagaacatgacagagaagctcgagagctttggcgctctaaaactggaccccccgcccaat
tcgctgcaacacgctcatccactgttcaacttccgctcaccaccaccatccctctcagat
gccatcctccgcaagggcaaggagcgatactcctgcaggtactgtgggaaaatcttccct
cgctctgcaaacctcaccagacacttgcggacacatacaggggaacaaccctacaggtgt
aaatactgtgaccgctcattcagcatctcatccaatcttcaacgccacgttcgtaacatc
cataacaaggaaaaacccttcaagtgtcacctgtgcaaccgctgcttcggtcaacaaacc
aacctcgaccgccatctcaagaagcacgagcatgagaacattcctgtgagccaacagtcc
gggatgctttccaacctaggaaccaccatctcctccccaaactccgagccagacaatcat
gcacttttagatgagaaggaggactcgtacttctcagaaatccgtaacttcatttccaac
agtgagatgaaccaggcctccagctccacggataagagatcagaccaggctgaggaggaa
cgcccaccgagccacagtttgtccaactctaagctaggtctccggggactagaggaggag
gaggaggaagtggagggcgacgatgaggaggaggaggaaggcagcctgacagagaagtct
cacgacgaggcgcctgagtcaccgtctcccgtcacaactggagtgtatgaggaggacgag
gaggaggaggagacagagacagctcctttagctatgggctatgaacacactcgcaggctt
atgcaatga
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integrated database retrieval system
