Anoplopoma fimbria (sablefish): 129099390
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Entry
129099390 CDS
T09102
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129099390
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
L1 family
129099390
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
C2-set_2
Ig_6
C2-set_3
Motif
Other DBs
NCBI-GeneID:
129099390
NCBI-ProteinID:
XP_054464591
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Position
12:complement(10589173..10637732)
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AA seq
1230 aa
AA seq
DB search
MRLVGSLQLVLLLALTSKATCLNIPLEVEQPPTIITHTSGPIIALPLDNTITIRCEARGN
PPPEYRWTKDGEDFVPPYLTTDHIDGTFVLHNKHLAPFRGKYRCYASNKLGTAMTEEIEL
RVPNVPKFPKEYNNPIVVKEGDPFILECNPPEGVAPRKIYWMSIGLQHIEQDERVSMGTD
GNLYFSNALQKDSRQDYCCFAAFTKIRTIVQKTAMAVVVESLKPGNESVDSSNATEAPPV
RIPSLLLPSGVQTEKVLLKGENLQLECIPQGYPTPTVHWMKMGEKLPLRTQLKNFEKLLF
ISSVDEWDGGKYMCKAKNSAGEAAHYFDVIVEDRPKWETEPPQSQLTVIGTDVHIKCSVS
GKPFPDITWRRNGKLFRDDPLSNRRVLDDTVILHNARAADSAVYQCEASNSHGSILANIN
IMVMNMAPRILTRDFQEYAVVLGGDIVMNCSVFSSPPPTISWAKDETLETIEGERFFAVN
GSLQIIRAERNDSGKYVCIASNKEGKSSVTAVLDVKDPTKIVYPPEDVQIISGNTAQLMC
QVEFDKSLQGSFEVVWSKDGEEIPLFSEENSRYFMDDGMLQIMSVNLSDQGIYKCIARTS
LDEDNATALLTVLDVPDAPKNLEISEMKSQRNVLLSWIPGSDHNSSVTEFIVEYEESQWE
PGRWKELQKVPGNQATAELALQGHLNYQFRVYAVNVVGPGPPSEPTERYKTPPAAPDKNP
ENIKIQGHLPHQMDISWEPLLPIEHNGPGLEYKVSYRKLDVEDVWREHLVKRHVFAVRNT
STFVPYEIKIQSRNSHGWGPEPKVVTGYSGEDVPTAAPRDIAVEVINTTVLRVSWTPAPP
ATVRGHLGGYNVHWLRKRSLLNPNKILDERQSLSFSGKRTHAIVPGLEPFSEYRLTVNVF
NKKGNGPNSDSVTFNTPEGVPEQVPILTASNAQKDSILLVWGPPLETNGVLTGYLLHHHL
INETTLEVVDSQETNITGADTTQWQLRGLEDGSLYRFHLRACTRAGCGPPLAQESTTVTQ
ARDGNWLVSEAVNASRSFHLIDGLKPGTVYTVRLMAKQLLNNASIFEDVIQTRVKGAEGQ
RSNFSTQGWFIGTMCAVALLTVVTLMACFVRRNRGGKYAGTPTQRQDMFSMEKVKEKEDL
HPDVESQGMNDDTFCEYSGSDSEEKPLKCSSLGTMNGDDALGDSVSRDSMVDYADGGREF
NEDGSFIGEYSGLTHGGSVNEPSGPRPVTA
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggtggggagcctgcagcttgttctgcttttggccttgacctccaaagccaca
tgcctcaacatccctctggaagtggagcagcctccaaccataataactcacacatctggt
cccattattgcccttcctcttgacaataccattactatcaggtgtgaagccaggggcaac
ccaccaccagaatacagatggacaaaagatggggaggactttgtccctccttacctcacg
acagaccacatagatggcacctttgtgcttcacaacaagcatctggccccttttcggggt
aaataccgatgctacgcttctaacaagctgggaactgccatgacggaggagattgagctg
agggttcccaatgtccccaagtttccaaaggagtataataaccccattgttgttaaagag
ggagatccattcatcctggagtgtaatcctccagaaggcgtggccccacgtaagatctac
tggatgtctattggtctccagcacattgagcaggatgagagggtttccatgggcactgat
ggcaacctgtacttctctaatgccttacagaaagacagtcggcaggactactgttgcttt
gctgccttcaccaaaatacgcaccatcgtccagaaaaccgccatggctgtcgtggtcgag
agcttgaaacctggcaatgagtctgttgacagcagcaacgccactgaagcccccccagtg
agaatacccagcctgctgctgccctctggtgttcagacagagaaggtgctgttgaaggga
gagaatctgcagcttgagtgtataccacagggatatcccacgccaacggtacattggatg
aaaatgggagagaagctgcctcttcggacacaattgaaaaactttgaaaagctgttgttc
atatcttctgtagacgagtgggatggtgggaaatacatgtgtaaagccaaaaactctgct
ggagaggctgcgcactactttgatgtaatagtggaagatcggccaaagtgggagacggag
cctcctcaaagccagctgactgtgattgggactgatgttcacatcaagtgctcggtcagc
ggaaaaccattcccagacataacatggcggaggaacggaaaattgttcagagatgaccca
ttgagcaacaggcgagtgcttgatgacactgtgattctccataatgccagagcagcagac
agcgccgtctaccagtgtgaagcctccaacagtcatggcagtatcctggccaacattaac
atcatggtcatgaatatggctccgcgaatactgacaagggacttccaagagtatgctgta
gtactaggaggggacatcgtcatgaactgcagtgttttcagctctccaccacccaccata
tcctgggccaaagatgagactctagagaccatcgagggggaacgattttttgctgtgaac
ggatctttgcaaatcatcagagcagaaagaaatgacagcgggaaatatgtgtgtattgcc
tctaacaaggagggcaagtcatctgtcactgctgtgctggatgtgaaagaccctacaaaa
atagtatacccacctgaggacgtgcagatcatcagtgggaacacagcccagttgatgtgc
caggtagagtttgataaaagcctgcagggttcctttgaggtggtttggagcaaggatggt
gaggagatcccacttttctctgaggaaaattccagatactttatggacgatggcatgctg
cagatcatgagtgtgaacctgagcgatcagggaatatacaaatgcattgctaggaccagc
ctagatgaggacaatgccactgcactactcactgtgctggatgttcctgatgctccaaaa
aatttagagatatctgaaatgaagagtcagagaaatgttctcctgtcttggatacctggc
agtgatcacaacagctctgtaacagaatttatagtagagtatgaggagagccaatgggag
cccggcaggtggaaggagctacagaaagtccctggtaaccaggcaacagccgagcttgca
ctacaaggccaccttaactaccagttcagagtgtacgctgttaatgttgttggacctgga
ccccccagtgagcccactgagagatacaaaacacctcctgctgctcctgataaaaaccca
gaaaacatcaaaattcaaggccacctccctcaccaaatggacattagctgggagccactg
ttgcccattgaacacaatggaccaggccttgagtacaaggtgagctacaggaaactggat
gtggaagatgtctggagggagcatctggtgaaaaggcacgtctttgccgtgaggaacacg
tccacttttgtcccctatgagatcaaaattcagagcaggaacagccacggctggggacca
gaacctaaagtcgttactggttactctggagaagacgtcccgactgcagcaccacgggac
atagcagtggaggtgatcaacaccactgtcctgagagttagctggaccccggctccacct
gccacagtgagaggtcatctagggggctacaatgttcactggttgaggaaacgaagtttg
ctgaaccccaacaagattttagatgagcgccagtcgctgtctttttctgggaagaggact
catgccatcgtgccgggcctggaacctttttccgaatacagactcactgtcaatgttttc
aacaagaagggcaacgggcccaacagtgactcggtcaccttcaacactccagagggagtt
cctgagcaagttcccattctgactgcctccaacgctcagaaagactccatattgctggtc
tggggcccaccgctggagacaaacggcgtcctcactggttatctcctgcaccaccacctc
attaatgagaccacactggaggtggttgactcccaggagacgaacatcactggggctgac
accacccagtggcagcttcggggtctagaggatggcagcctctaccgcttccatctcaga
gcctgcactcgagcaggttgtggacctccgctggcccaggagagcaccactgttactcaa
gcacgtgatggtaactggctggtatcagaggctgtaaacgcttctcgaagtttccacctt
attgatgggctcaaacccgggacggtgtacactgtgcgcctcatggccaagcagctgctc
aataacgctagcattttcgaagatgttatccagacccgagtcaaaggtgcggaaggtcag
cggagcaacttttcaacccagggctggtttattggcaccatgtgtgctgtggcgctcctc
accgttgtcacactcatggcctgctttgtgcggagaaacagaggtggcaagtatgcaggt
acgccgacccagcgacaagacatgttctccatggaaaaagtgaaagagaaggaggacctc
caccctgacgtggagtcacaaggaatgaatgatgacaccttctgtgaatacagtggcagt
gacagcgaagagaagccactaaagtgcagcagcttgggtaccatgaatggcgatgatgcg
ttgggggacagcgtcagcagagacagcatggtcgactacgccgacggtggaagagaattc
aacgaggacggttcatttatcggagaatattctggactcacgcacggaggctctgttaac
gagcccagtggacccagaccagtcactgcataa
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