Anoplopoma fimbria (sablefish): 129099428
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Entry
129099428 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: protein SOGA1-like
KO
K27704
microtubule cross-linking factor
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129099428
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129099428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
ComGG
Motif
Other DBs
NCBI-GeneID:
129099428
NCBI-ProteinID:
XP_054464638
LinkDB
All DBs
Position
12:1867487..1955528
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AA seq
1822 aa
AA seq
DB search
MTKTKEVDVHTSPAHLVFASPKERRLHLRQKMESGAGTEGSDVGEKKKINRAPSPARPKE
APGWSLTKIRGGIGTPTLSVKPGSIHLSSRVSRGKDAKPERSGGSKPAGKTSSSPVCKTS
KVATGGRRKVSDASLASDDASKDSGCPAGKTSPTDSSSELSDSPEPVSSDAESRSHCCKD
RLSLCVEAGAGSLSPGEERSSVASFDSRVPASTSLAFSDLTEELMDGMQEEFVREIEELR
SENDYLKDEMEELRSEMLEMRDMYMEDDVYQLQDLRQQLEQANKTCRILQYRLRKAERRS
LRVAQTGQVDGELIRTLEQDVKVAKDVSIRVHSQLDSVEKKRSRLDQENEELRVRLQDLE
VAKQVLQQEIDKNSQRKRGARPNNKPDKKLCPQEDSSDLKCQLHFAKEESALMCKKLTKL
VKDSEAMKEELAKYRSLYGDVNASLTVEEVADSPHTREAEIRVHLKLVEEEANLLSRRIV
ELEVENRGLRAEMDDMKGPQDGPLELSGVGCGLGGGAMVLGGGASSENVMELQRHLQFVE
EEAELLRRSLIEMEEQNKLLMNEINRCKSDLQPPTPALSSNSLASLTEGLLNDSPVHSIQ
EGAVLISTDAPAHEEELRLARLQIGELGGKVKKLQYENRVLLSNLQRCDLASYHAPSSSS
SSSSLRLSLETDAEAGDSAECLPRYPPLRKEPVGGETDALEIKERKKKIEDNADATASLP
GYLGQKDHDALLAMRDQARLVSTAIQLLTSPESNCLSSSPSIYHKVCSNEAAEPCDLEKP
QPHSQISELSDLADRPLVGALTSRLQALHTQLQAFVERVDSQGKPPAGGRDPQVEGASPL
ASPCASLPCSGDGQDGLNTAVEQQPDYRDQSEPEVKCQIEENSQSDSNETQKQEHSQLEQ
GEKETDDALPVHGDDLGAQLSEVEETSLGTQGELEKERQAQRETALKLTQLQEEHQKALL
RRDFQLQSLGLQARLQQKLWSQERTLLVQESQHLKQALLLLSLKLRCFLKQWRLGCRKDA
EWKDILEMNSLKDLYLLLEEENLSPAHQTDKRAAADEQPLSPTIKSSSVSSTLADLKVAL
QDLSGELRQERQGSQELTQQFAKAKASWEVERTELKSILTQLETKSGKAASLSVTDALDP
PDLKVALKREREEHQHLLADSYAAVMDLTKQLQIGETNWGREKLELLERFSQERAQWEQR
LGEATAQQGKSKSLGSESSADAFVTNGTGSPRTKSTSELDGPEVNGTANQEERIQFAVPE
LGDLTRKNWTYLTNETPEVGDTCKTWDGPSGSCSSLVGSELDLESVQRSYTAPDRTGIRI
YYSPPAVRRMEQRRRSQEAKEPQQAQNGSSYLGVSGSDAGVAAFGTLEVQQKQPPSTFSS
SYEQWLSSLSKQHRELLESRSVCIAGSIPSVASNGEGMAPSSAFHGLEIGEISANLSDDM
KEMTNCVRQAIRSSSLERKSSKEHGSQALGMSTRSTQTAAQYVSIGLQTDHLPSSRGTGL
HSKNWCPRPXPTSTSSLASARTRQISTSLDKVHSRIDRPCCSPKYGSPKLQRRGSSGSTS
RLDGSTSSRDRSLWSLQQRSMGGGGGSAWARSTTTRDSPVLNGLTDGLSSLFSVVEHSGS
TESLWKGDGGASQGASPARQPSPAGKSTTAAVCGSDPGSQRYGGLVQEFFRNVCSNRGPG
GVTLSEEGAQRDSNGSLGGLVVMGGFGVVDEPKPECVSARVGGFGALAGSNDSVTKIVNK
RFMRQTAGDEMVSIMGGGKETMSSAVAAGPGTEDAPCDCAGQSSSCLARPSRPSARHSLG
QCKHRPQESPAATEEKGDPCNE
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccacacctctccggctcacctcgtcttcgcctcg
cccaaggaacggaggctccatctccggcagaagatggagagcggagccgggactgagggc
tcggacgtcggggagaagaagaagatcaaccgggctccatccccggccagacccaaggag
gcaccgggctggtcgctcaccaagatccgtggaggcatcgggaccccgaccctgagcgta
aagccgggatccatccacctgagcagccgggtctccagaggaaaggacgccaaaccggag
cgcagcggggggtccaagcctgcggggaagacctcctcatccccggtgtgcaagacctcc
aaggtggccacaggaggacgcaggaaggtgtcagacgccagcttggcatccgatgatgca
tccaaggactccggctgccccgcagggaagacgtccccgacggacagcagctccgagctc
tccgactccccggagccggtgagcagcgacgcagagtcccggagccactgctgcaaggac
cggctgtccctgtgcgtggaggccggggcagggagcctgtccccgggagaggagcgctcc
tcggtcgcctcgtttgacagcagggtcccggccagcacctccctggccttctcagacctc
acagaggagctcatggacggcatgcaggaggagtttgtccgggagatagaagagctgaga
tctgagaatgactacctcaaagatgagatggaggagttgaggtctgagatgctggagatg
cgggacatgtacatggaagatgacgtctaccagctgcaggacctacggcaacagctcgag
caggcaaacaagacctgccgcatcctgcaataccggctgaggaaggcagagcgacgctct
ctgcgcgtggcccaaacagggcaggtggacggagaactgatacggacgctggagcaagat
gtcaaagtggcgaaggacgtgtccatccgtgtccacagccagctggacagcgtggaaaag
aagaggagtcgtctggatcaggagaacgaggagctgagggtccgactgcaggacctggag
gtcgccaaacaggtcctgcagcaggagattgacaagaattcccagaggaaaagaggagca
agacccaacaacaaacctgacaagaagctctgtccacaggaggacagctcagacctgaaa
tgccagctccactttgccaaagaggagtcagccctgatgtgcaagaagctgaccaaactg
gtgaaggacagcgaggccatgaaggaggagctggccaagtacaggtcgctgtacggggac
gtcaacgcctcgctcaccgtggaggaggttgccgactccccccacacgcgtgaggcggag
atcagagtccacctgaagctggtggaggaggaggccaacctgctgagtcgacgcatcgtt
gagctggaggtggagaacagggggctccgagctgagatggacgacatgaagggaccacaa
gatggtccacttgagctttctggtgttggttgcggccttgggggaggagccatggtactc
gggggaggggcttcatctgaaaacgtcatggagctccagagacacctccagtttgtggag
gaggaggcggagctactgagaaggtccctcattgagatggaggaacagaacaaactcctg
atgaatgagataaaccgctgtaaatctgacctgcagccgccaacgcctgcactgtcgtct
aactcattggcgtcgctcactgaggggctgctcaacgacagcccggtgcactccatacag
gagggggcggtgcttatcagcacagacgcccccgcccacgaggaggagctccgactggcg
aggcttcagattggagagctgggtggaaaggtgaagaagctgcagtatgaaaaccgagtg
cttctgtccaacctgcagcgctgtgatctggcctcctaccatgctccatcctcctcctcg
tcttcctcatcactacgattgtctctggagactgacgccgaggctggagactcagctgag
tgcctcccaaggtacccgccgctccgcaaagagccagtcgggggtgagaccgacgccctg
gagatcaaggaacggaaaaagaagatcgaggacaacgctgacgcaaccgcctcactccct
ggctacctggggcagaaggaccatgatgccttgctggccatgagggaccaggctcgcttg
gtttccacggcgatacagctcctgacttccccagagtctaactgcctctcctcctccccg
tccatctatcacaaggtctgcagcaatgaggcagcagagccgtgtgacctggagaaacct
cagcctcacagccagatttcagagctgtctgatctggcggaccggcccctggttggtgct
ctgaccagcaggctccaggccctacacacccagctacaggcctttgtggagcgggtagac
agccagggtaaacccccagcgggtgggagggaccctcaggttgaaggagcgtctcctctg
gcctcaccctgcgcctccctcccctgctctggggacggacaggatggactgaacaccgcc
gtggagcagcagcctgattatagggaccaatcagagccggaggtgaaatgtcaaatcgag
gagaacagccaatcagacagcaatgagacacaaaagcaggaacacagccagctggaacag
ggagagaaggaaacagacgatgcgctgcctgtccatggcgatgaccttggggctcagctg
tccgaagtggaggagacgtcattgggaactcagggggagctggagaaggagaggcaggct
cagagagaaaccgccctcaaactcacacagctccaggaggagcaccagaaggctctgctc
cgtcgggacttccagctgcagagtttgggcctccaggctcggctccagcagaagttgtgg
agccaggagaggactctgctggtccaggagtcccagcacctcaaacaggccctgttactg
ctcagcctcaaactacgctgcttcctcaaacagtggaggctgggctgcaggaaggacgca
gagtggaaagacatcttggagatgaacagcctgaaggacctctacctgctgctggaggag
gagaacctgagtcccgcccaccagactgacaagagggccgctgcagacgaacagccactc
agcccaactatcaagtcgagctccgtgagcagcaccttagcagacctgaaggtggcgctg
caagatttgagtggagagttgcgacaggagagacaaggctcccaagaactcacacagcag
ttcgccaaggccaaggcatcatgggaggtggagaggactgaactaaagagcatcttaacc
cagcttgagaccaaatcaggaaaagcagcatctctctccgtcactgatgctctggatcct
ccagacctgaaggttgcgctgaagagggagcgtgaagagcaccagcacctcctggctgat
tcctacgccgccgtgatggacctaacaaaacagcttcagatcggagagacgaactggggc
agagagaagctggagctgctggagaggttcagccaggaaagagctcagtgggagcagaga
ctgggagaggccactgcacaacaggggaagtcaaagtcattaggcagcgagtcctctgca
gacgcattcgtcacgaatggaacaggatcaccaagaaccaaatccacatcagagctggac
ggcccagaagtcaacggtacagccaatcaggaagagagaattcagtttgctgtcccagag
ctcggtgacctcaccaggaagaactggacctacctaaccaatgagaccccagaggttggg
gacacctgtaaaacctgggatggtcccagcggctcttgcagcagcttagtgggatcagag
ctggatctggagtccgtccagaggagctacactgctccagaccgcaccggcatccggatc
tactacagccctcctgctgtaagacgcatggagcaaagaagaagaagccaggaggccaaa
gaaccacagcaggcccagaacggaagctcttacctgggagtgagtggctcagatgcaggc
gtggctgcttttggaactcttgaggttcagcaaaaacaacctccatccactttttcatcc
tcatacgagcagtggctgagctcactgtctaagcagcacagggagctgctggagagcaga
agtgtctgcatcgctggttccatccccagtgtcgccagcaacggcgaagggatggcgccc
tcgtcagctttccacggcctggagatcggggagatttcagccaacttaagtgacgacatg
aaggagatgaccaactgtgtccgccaggccatacgctcttcctctctggagaggaaatcc
tccaaggaacatgggagtcaggctctgggcatgtcaaccaggtccacacagaccgctgcg
cagtacgtcagcatcgggcttcaaaccgaccaccttcccagcagcagagggacggggtta
cactccaagaactggtgtcctcgccctncgccaacatctacatcctcgctagcgtccgct
cggacccggcagatatccacatccctggataaagttcacagccgcatcgataggccgtgt
tgttcacccaagtatggatcaccaaaactacaacgcagagggtcttctggctccacctcc
agactggatggcagtacctcttccagggaccggagcctgtggagcctccagcagagatcc
atgggtggaggaggaggctcggcctgggctcgctccaccaccaccagggacagccccgtc
ctgaatggcctcaccgacggcctctccagcctctttagtgtggtcgaacactctggaagc
acagagtcgctctggaagggtgacggaggagccagccagggagccagtccagcacggcag
ccttcccccgcaggtaaatccaccactgcagcagtctgtggttctgaccccggctctcag
cggtacggaggcctggtccaggagttcttcaggaatgtctgcagcaaccgtggcccagga
ggagtcaccctgtctgaagagggagcgcaaagagactccaatggcagcctcggaggtctg
gttgtcatggggggttttggcgtagtggatgagcccaagccagagtgcgtgtcagcaagg
gttggtggattcggggcactggctggaagcaacgacagtgtgaccaagatcgtcaataag
aggttcatgagacagacggccggggacgagatggtcagcatcatgggaggagggaaagaa
accatgagcagcgctgtcgccgccggacctgggacggaggatgcaccctgtgactgtgct
ggccagtcctcttcctgcctcgcccgaccatcaagaccatcagctcgccattcgctcggc
cagtgcaaacaccgcccacaagagtctccggcggcaaccgaggagaagggggacccctgc
aacgagtga
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integrated database retrieval system
