Anoplopoma fimbria (sablefish): 129099459
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Entry
129099459 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1.1-like
KO
K06550
L1 cell adhesion molecule
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04514
Cell adhesion molecule (CAM) interaction
afb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129099459
04517 IgSF CAM signaling
129099459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129099459
04090 CD molecules [BR:
afb04090
]
129099459
04091 Lectins [BR:
afb04091
]
129099459
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
L1 family
129099459
CD molecules [BR:
afb04090
]
Proteins
129099459
Lectins [BR:
afb04091
]
I-type lectins (Siglecs)
129099459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_5
C2-set_3
Tissue_fac
Fn3_VIN3
Sp38
Motif
Other DBs
NCBI-GeneID:
129099459
NCBI-ProteinID:
XP_054464682
LinkDB
All DBs
Position
12:complement(26008898..26032706)
Genome browser
AA seq
1226 aa
AA seq
DB search
MPESYTAFSQEDVYLPCEASGNPPPTFRWMKDGEAFGPESTESGTLRAEDEEPIESFEGY
YRCYASNMLGTAVTKTIQVIVEAQPVLLKQEKVYKKAHEGDSIILSCSPPQSSTPPHIHW
MDRRMVHIKQNDRVMVGLDGNLYFSNLLKSDSRDDYICNAQYTAARTVLPSTAVSLTVMS
SNDVSHARKPHLFRPIGSHTAVSALRHQSVTLECIPKGLPTPKVEWKKKDGNLEETTGRV
ESHDRWLYFDKITQNDDGEYECRAFNIHGSTSHSFTLTVEASPFWVKEPQNLLYSPGETV
RLDCQAEGIPTPAITWSINGQPVSDVDEDPRRTVSGGVLILRDVEFADTAVYQCEATNKH
GSILLNTYLYVVELPPQILSSDGVVYRVIEGGDITLHCETFGSPRPHVTWEGEERLPLLS
DPRVALLTNGSITLSGVDHQDKGEYTCTIKHTNISVTAHLEVFNRTVILTSPQEVRTLRG
TSALLDCRFYRDPQLLKYQIVWRKDGHKLQESSPDDKYTFFRNGTLKVSDIQPDDSASYS
CEVFTDLDDVTASGSITVVARPDPPKDLSLSEVQDRSITLSWIPGHSHNSPTTEFIVEVR
EEQHREEKHWNWEKLKSVPGDFNHVELTLDPYCTYRFRVIAVNEIGLSDPSRPSGNYSTP
PAVPGMNPRGVRSDSTDPKTLIITWDEMDKRSHYGVGFQYKVFWRKAGGTNVHWNHADVQ
SPPFMVNNTGTYTPFEIKVQAVNSVGDGPAPVPEVGHSGEEEPEEAPTGVTTTVMNSTVR
VQWNEAQNVRGLLLGYKIYVRRLGPRSSRVRRSFFNLHREKERSERGKEREREMKQEINS
SGNKTSKDLMGLQMYSNYELSISTLNSKGESPQSPPHHFSTPEGVPDPPASLRFDSPSEK
SLILYWTPPVQTNGILLGYILQYQKEVESRDSELKIDTIDDPDKTHYELDTLDPSSHYIF
KVIARTATGAGPPITRRGATLLEGVPPSHVSIVSSNTSLNLSWVPGERDRNHGFIIRYLR
KSLGGEWTDSEVVNSTQGFYSLTGLQPGSEYHLMIKHGNNTQWENMTRTIGPVPSLIRDG
FAAQGWLIGLISAILLLVLILLILCLIKRSKGGKYAVKDKEDKEVDSEARPMKDETFGEY
SDADEKRSDSQPSLCGESKMGSDDSLAEYGDSVDIQFNEDGSFIGQYSNRAPRPHGNESS
GPAXPVNAVPPPPXAPSMTSIINRPS
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtcgtacacagccttctctcaggaggacgtctatctgccctgtgaggcctcc
ggtaacccgccacccactttccgctggatgaaggacggcgaggcgttcggccctgagagc
acagagtccgggacgctgagggccgaagacgaggagcccatcgaatcgttcgagggctac
taccgctgctacgcctccaacatgctggggaccgccgtcacaaagaccatccaggtcatc
gtggaggctcaaccagttcttctgaagcaagagaaggtttataagaaagctcacgaggga
gacagcatcatcctgtcctgtagccctcctcagagctccactcctccacacatccactgg
atggacaggaggatggtgcacatcaagcagaacgacagagtgatggtcggcctggacggg
aacttgtacttttctaatctgctgaagagcgacagcagagacgactacatctgcaacgcc
cagtacacggcggccaggacggtcctccccagtacggccgtcagcctcactgtcatgtcc
agtaatgatgtcagtcatgccaggaagccccacctcttccgtcccattggctcccacacg
gctgtgtcggccctcaggcatcagagcgtcaccttagaatgtatccccaaaggcctaccg
acgccaaaggtggagtggaaaaagaaggacggaaacctggaagagacgaccggccgagtg
gagtcccacgaccgctggctctacttcgacaaaatcacgcagaacgacgatggcgagtac
gagtgcagggccttcaacatccacggctccacctcgcactccttcactctcaccgtggaa
gcgtctcctttctgggtgaaggagcctcagaacctgctctactctcccggggaaacagtt
cgactggactgtcaggctgaaggcatcccgacgcccgccatcacctggagcatcaacggt
cagcccgtctcagatgtggatgaggatcctcgtcggaccgtgtcgggtggagtgttgata
ctgagggacgttgagtttgctgacaccgccgtgtatcagtgcgaggccaccaacaaacac
ggctccatcctcctcaacacctacctctacgtcgtcgagctgcctcctcagatcctgtcc
tctgatggagtggtgtacagagtcatcgagggcggagacatcacgctgcactgtgaaacc
ttcggctcgccacggccgcacgtcacatgggagggcgaggagcggcttcctctgctgtcg
gaccctcgcgtcgccctgctgaccaacggctccatcacgctgtccggcgtcgaccaccaa
gacaaaggagagtacacctgcaccatcaaacacaccaacatctccgtcactgctcacctg
gaagtcttcaatcgcaccgtgatcctgacgagcccgcaggaagtgagaacgctcagagga
accagcgctctgctggactgtcggttctacagagaccctcagctgctcaagtaccagatc
gtctggaggaaagacggacataagctgcaggagtcgtctccagatgacaagtacacgttc
tttaggaatggcaccctgaaagtgtcggacatccaaccagacgacagcgcttcttattcc
tgtgaggtcttcactgacctcgacgacgtaacggccagtggctccatcaccgtcgtagcg
cgaccggaccctccaaaggatctgtctctgtctgaggttcaggaccgcagcatcactctc
agctggatcccaggacactcacacaacagccccaccacagagttcatcgtggaggtcagg
gaggagcagcacagagaggagaagcattggaactgggagaagttgaagagcgttcctggt
gacttcaaccacgtggagctgacccttgacccctactgcacctaccgcttcagggtcatc
gccgtcaacgagatcggcctcagcgaccccagcagaccctcgggaaactacagcacgccg
ccagccgttccggggatgaacccccgcggtgtccgcagcgactccaccgacccaaagacg
ctgatcatcacatgggatgagatggacaagcgctcccactacggcgtgggcttccagtac
aaggtgttttggcggaaggctggagggacgaacgtccactggaaccacgccgacgtccag
tctcctccgttcatggtgaacaacacgggaacgtacacgccctttgagatcaaagtccag
gcggtgaactctgtgggagatggaccggcaccggtaccggaggtcggacactcgggagag
gaagagccggaggaagctcccaccggagtcacaaccaccgtgatgaacagcacagtcaga
gtccagtggaacgaagcccagaacgtcagaggtctgctgctgggatacaagatctacgtc
aggaggttgggtccacgaagcagtcgggtccggaggtctttcttcaatctgcacagggag
aaagagagatcggagcgagggaaggagagagagagggagatgaagcaggaaataaacagc
agcggcaacaagacctcaaaggatctgatgggtctgcagatgtactctaactatgagctg
tccatcagcaccttaaacagcaaaggggagagccctcagtcccccccgcaccacttcagc
accccggagggagtgcctgatcctcctgcatcgctgaggtttgatagtccctcagagaaa
tccctgatcctctactggacccctccagttcaaaccaatggcatcctgctgggatacata
ctccagtatcaaaaggaggtggagagcagagacagcgagctgaagatagatacaatcgac
gaccccgataagacccactatgagttggacactctggaccccagcagccattacatcttc
aaagtgatcgctcgcaccgccaccggagccggaccccccatcacgcggaggggcgccacc
ctgctggaaggagttcctccgtcccacgtcagcatagtttccagcaacacgtcgctcaac
ctgagctgggtgccgggagagcgagacaggaaccacggcttcatcatccgctacctccgg
aagagtctcgggggcgagtggacggactcggaggtggtgaactccacgcagggtttctat
tcgctgacgggcctccagccaggatctgagtaccacctcatgatcaaacacgggaacaac
actcagtgggaaaatatgacgaggaccatcggaccagtgccgtcgctgatacgcgatggg
ttcgccgcccaaggctggttgataggactcatcagcgccatcttgctgctggtgctgatc
ctgctcatcctctgcctcatcaaacgaagcaagggcggcaaatacgcagtgaaagacaaa
gaagacaaggaggtggactctgaagcccggcccatgaaagatgagacctttggagagtac
agcgatgcggatgagaagcgttcggacagccagccgtctctgtgcggtgagagtaagatg
ggcagcgacgactccctggccgagtacggagacagcgtggacatccagttcaacgaggac
ggctccttcatcggccagtacagcaaccgggccccccgcccccacggcaacgagagctcc
ggccccgccntccccgtcaacgccgtcccgcctcccccanccgctccatccatgacgagc
atcatcaaccggcccagctag
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