Anoplopoma fimbria (sablefish): 129099480
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Entry
129099480 CDS
T09102
Symbol
usp11
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 11
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129099480 (usp11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129099480 (usp11)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129099480 (usp11)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129099480 (usp11)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129099480 (usp11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
zf-MIZ
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
129099480
NCBI-ProteinID:
XP_054464709
LinkDB
All DBs
Position
12:complement(26393737..26412480)
Genome browser
AA seq
1016 aa
AA seq
DB search
MTEPPGLETQRREVASLLRQSELRAGDSWYVMERRWYEQWKEFVETGDQNSSSFPGQIDN
AELFEDLDSYHLKERLVENEDFMLVPAEAWHRLLDWYGMVDGQPPLERKVVDLPSTLKVE
VYPVEIFLCLHSNMENVITAQFSRADSIHSIQRAMCDAFTVPPGSECRLWMKSSDSSCER
LRNVHVSVLDACLSSGMTVIMETRNADGTWPSSRPQIMRNSVEDQDSYRGQPGVCGLTNL
GNTCFMNSALQCLSNTPPLTEYFLLSSYLEELNFTNPLGMKGEIAEAYADVIKQMWSGRH
FSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIELRDAEGRP
DQEVAEEAWRNHRRRNDSVIVDTFHGLFKSTLVCPECHKVSVTFDPFCYLSVPLPVSKER
VMEVFFVSLDPYAKPAQHRVVVPKAGKVSDLCSALSEMTDVPPTQMVVADVFNHRFYKIY
NADECLSCILDRDDIFVYELSVLEEQQEEQVLLALYLRERSHYRDYGSGSSSYGTSLFGH
PLLLSVPRSCCSREALYKLFLQRLARYVRPPDPSEELEEEEEEEDEEEEELYKTQTNGIS
DEEEQEDGEKAGPSQTQPCSGDSSANGQSEETATAERRPNVNHTQPSLDDGDTETTDAAE
NQTEPVCSAGANTTNADVVNPGGDSSSNTATAAEPPPPAEQPHPPRETTEEEKEEDKQEE
ACSPSLPANEQPAKRKACRKRRKSLFTIQAVNSNGTTERGTGEGGSAVSFSSQPYVAIDW
DPEMKKRFYNENEAEKYVKHGSMEVPQQQTTVQLQECIELFTTVETLEEENPWYCPVCKK
HQLATKKLDLWSLPEVLIIHLKRFSYTKFTREKLDSIVDFPLRDLDFSGCLLKKSLSNGE
PPSRYDLIAVSNHYGGLRDGHYTSYAWNKDNGQWYYFDDSKVTYAREDQIVTNAAYVLFY
HRRDKIRKPTLPAPTSGPAASSASQTANDITSCKDDDADAELGATASASYVTMETD
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcctccgggtctggagacgcagcggcgggaggtcgcgtcgctgctgcggcag
agcgaactgcgcgctggcgacagttggtacgtgatggagcgtcgctggtatgaacagtgg
aaggagtttgtggagaccggagaccagaactcgtcttccttccccggtcagatcgacaac
gctgagctgtttgaggatctggactcgtaccacctgaaggagcgtctggtggagaacgag
gacttcatgttggtgccggccgaggcctggcacaggctgctggactggtacggcatggtg
gacgggcagccgccgctggaacgcaaggtggtggacctgcccagcactctgaaggtggag
gtttaccccgtcgagatcttcctctgtctccatagcaacatggagaacgtcataacggca
cagttcagccgcgccgacagcatacactcgatccagagggcgatgtgcgatgccttcacg
gtgcctccgggatcagagtgccgtctgtggatgaagagttcggacagcagctgcgagcgc
ctcaggaacgtccacgtgagcgtgttggacgcctgtctgagctccgggatgacggtgatc
atggagacgaggaatgccgacggtacctggccgagctccagacctcagatcatgaggaac
tctgtggaggatcaggactcgtatcgaggacagccgggagtctgtggcctcaccaacctg
ggcaacacatgcttcatgaactctgctctgcagtgtctgagcaacactcctcctctgacg
gagtacttcctgctgagctcctacctggaggagctgaacttcaccaaccctctgggcatg
aagggcgagatcgccgaggcctacgccgacgtcatcaagcagatgtggtccgggaggcat
ttctccgtggtgccgcgcgtcttcaagacgaaggtgggtcactttgcgtctcagtttctg
gggtaccagcaacacgacagtcaggagctgctttccttcctgctggacggactgcacgaa
gacctgaaccgggtcaaaaacaaagagtacatcgaactccgggacgccgagggacgaccg
gaccaggaagtggccgaggaggcgtggcgtaaccaccggcggcggaatgactcggtgatc
gtcgacacgtttcacggcctcttcaagtccacgctcgtgtgtccggagtgccacaaggtc
tccgtgaccttcgaccccttctgctacctgagcgtcccacttcctgtcagcaaggagcgc
gtcatggaggtcttcttcgtgtctctggacccctacgccaaacctgcacagcatcgtgtc
gtggttcctaaagcaggaaaagtttctgacctctgctctgctctgtcagagatgaccgac
gtacctccaacacagatggtggtagctgacgtgtttaaccaccgtttctataagatctac
aacgctgatgaatgtctgagctgcattctggaccgagacgacatctttgtgtacgagctg
agtgtgctggaggagcagcaggaggagcaggtgctgctggcgctctacctgagggagcgc
tcccactacagagactacggctccggcagcagctcctacgggacgtcgctgttcggacac
ccgctgctgctcagcgtaccgcgcagctgctgcagccgggaggcgctatacaagctgttc
ctgcagagactagcgcgctacgtgcgacctcccgatccctctgaggagttggaggaagag
gaagaggaggaagatgaggaggaagaggagctgtacaagactcagaccaacggcatcagt
gacgaggaggagcaggaggacggggagaaagccgggccgtctcaaacacaaccctgcagc
ggcgattcgtcagcaaacggccaatcagaagagaccgctaccgccgaacgccgccccaac
gtcaaccacacgcagccctcattggacgacggcgacacggagaccactgacgcagcagag
aaccagactgaacccgtctgcagcgccggtgccaacaccaccaacgccgacgtagtcaac
cccggcggggactcgagcagcaacaccgccaccgccgcagaaccaccgccaccagcagag
caaccgcatccgccacgcgagaccacagaagaagaaaaagaagaagacaagcaggaggag
gcgtgttctccgagcctgccagccaatgagcagccggcgaagaggaaggcgtgtcgcaag
aggaggaagagtctgttcaccatacaggcggtgaactccaacgggacgacggagagaggg
acgggggagggggggagcgccgtgtccttcagctctcagccctatgtggccatcgactgg
gaccctgagatgaagaagagattctacaatgagaacgaggccgagaagtacgtgaaacac
ggcagcatggaggttcctcagcagcagaccacggtccagctgcaggagtgcatcgagctg
ttcaccaccgtggaaacgctggaggaggagaacccatggtactgtccggtgtgtaagaag
caccagttggccactaagaagctggacctctggtctctgccggaggtcctgatcatccac
ctgaagaggttctcctacaccaagttcaccagagagaagctggacagcatcgtggacttc
cccctcagagacctggacttctccggctgcctcctgaagaagagtctgtccaatggggag
cctccgagccgctatgacctcatcgctgtgtccaatcactacggagggctcagagacggc
cactacaccagctatgcgtggaacaaggacaacggtcagtggtactactttgacgacagc
aaggtgacgtacgccagagaggaccagatcgtgaccaacgccgcctacgtcttgttctac
catcgacgagacaagatcagaaagccgaccctgccggcgccgacctccggccccgccgcg
tcctccgccagccagaccgccaacgacatcacttcctgcaaggatgacgacgcagacgca
gagctgggcgccaccgcctccgcctcctacgttaccatggagacggactaa
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integrated database retrieval system
