Anoplopoma fimbria (sablefish): 129099485
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Entry
129099485 CDS
T09102
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129099485 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129099485 (lamb2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Laminin_II
Motif
Other DBs
NCBI-GeneID:
129099485
NCBI-ProteinID:
XP_054464715
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All DBs
Position
12:5569853..5613179
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AA seq
1785 aa
AA seq
DB search
MHASLVALLCVLAAAVGQEPDHSYGCAQGSCYPATGDLLVGREKKLKASSTCGMRKKQPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIENVITTFKPHRKKSWWQSENGKSDVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMLIEHSADFGRTWQIYRYFSHDCATTFPGVSQGPLRN
INDVICESRYSDIEPSTEGEIIYRVLEPAIRIEDPYSPSIQNQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAMYELVVRGNCFCYGHAAECAPIDGIRDDIEGMVHGRCVCNHNT
KGLNCERCDDFHNDLPWRPAEGRSTNACKKCNCNSHSSQCHFDMAVYLAMGNLSGGVCDD
CEHNTMGRNCEMCKPFYYKDPIKDIRDPRVCIACDCDPDGSLNGGMCDTHTDPSLGMMGG
QCRCKANVEGPRCDKCKTGFFGLSADNPQGCQPCRCDNRGTVSGSSQCDPVSGDCFCKRL
VTGRSCDQCLPEHWALSHDLNGCRGCECDIGGALDNHCSMESGQCRCRSHMTGRQCTQVE
SRYFFMALDHFLHEAEFAKMGQGCTLETREHQPGRPATWTGIGFARVPEGGTLEFLISNV
PYSMEYDLLIRYETQMPRDWEEVRITVIRPGPIPTSSPCGNTIPDDDRLTVSLPAGARFV
VPPKAVCLERGVTYTLRFEFKRYQDANSILNGAANAVLLVDSIALMPRHSSMDMFNAGDP
ASNNRKQTYERYRCHEAAKSVTRPLMSDTCAKLITSMSAIVNDGALACNCDPQGSISSMC
DVRGGQCQCRPNVIGRRCDQCAPGTYGFGPSGCIACGCSLEGSVTRLCDKLTGQCQCRPG
AFGQRCDGCQAGHWGFPSCRPCQCNGHADQCDQRTGACVSCRDNTGGDKCDRCANGYYGN
PILGKASSAQCRPCPCPDGPNSGRHFAASCYQDNRNRQIICNCNQGYTGARCEECAPGYY
GNPSQPGGRCQPCQCNNNIDMSDMESCDRQTGQCRKCLYNTEGPSCGICKSSYFGDASRR
NCRKCTCNFLGTDRGQCMEREDCVCQRATGQCQCLPNVIGLTCDHCAPNHWNLASGTDCE
PCGCDLNNSVTSSCNEFTGQCQCRDGFGGKTCTDCQENYWGDPRTQCRACDCDWRGIETS
QCNRLTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHKCFGDWDRIVQDLAVRTKTLAE
RAHDIQTTGLTGAYEKAFRDLEEKLAQARGIVDGRNATAAAVATLMELIEELREQIGDTT
DTLNRLEGELTNVQDSNSEASKELSALEREAKELNLTSEQLHRQLDILKNSNFLGAYDSI
RTSYNKSRDAERRANESTTTRPSTVSQSADTRRRTERLITAKKDDFNRKNAANKRALSDL
NTWSQGLDLKKINDKVCGAPGDAPCGESPCGGAGCRDDEGNRHCGGLNCNGAVAVADNAL
ERAKHAEKELNKAMGEVEGLFTKVADAKTKAEEAKGKAQAALDKATATKNKVERSNNDLR
DLIKQIRDFLTQEGADPDSIEAVANRVLELSIPASPLQIRHLADEIKERVRSLSNVDAIL
QQTQEDVRKAEQLLLDAKRARHSAEEVKNTAETVKQALVGAKTAQTSAEKAIARAKVDIG
ETEARLAQIESETSNSEKDLNEAMDRLGTLGQEITALKTKRANNSMAAARAEETATMARD
KANEAKQILDGQLTDKYHEVQQRVDTKAKAVQDAKKRAESLRDEAKGLLRDAQNKLKRLA
ELEKNYEENQRRLEGKARQLDGLEDKMKAILSDINKQIQIYNTCQ
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctcactggtagcgctcctttgcgtcctggctgctgccgttggccaggagcct
gaccacagctatggctgtgcccaaggcagctgttacccggcaacgggggacttgctggtt
ggacgagagaagaaactgaaggcctcgtccacatgcgggatgaggaaaaaacagccctac
tgcattgtcagtcatctgcaggatgagaagaagtgtttcgactgtgactctagacgacca
tacgacccagtgtacaacaccatcaatcaccggatagagaacgttatcaccaccttcaaa
ccccaccgcaagaagtcctggtggcagtcagagaatggaaagtcggatgtctttatccag
ctggatctggaagcagagtttcatttcactcacctgattatgaccttcaagaccttccgt
ccggcggccatgctgatcgaacactctgcagatttcggtcgcacctggcagatctaccgc
tacttttcccatgactgcgctacaacctttcccggagtctcccagggaccattgcgtaac
attaatgatgtcatctgtgagtcgcgttactctgacattgaaccgtcaacggagggagag
atcatctacagagtgttggagccagctatcaggattgaggatccatacagcccgagcatc
cagaaccagctgaagatcaccaacttgagagtgaacttcaccaagcttcacacactggga
gacaacttgctggaccccagagctgaaatcaaagagaagtactactacgccatgtacgag
ctcgtcgtacgcggaaactgcttctgctatggccacgccgcggagtgcgcccccatcgac
ggcatcagggacgacatagaaggaatggttcacggcaggtgtgtgtgcaaccacaatacc
aaaggtttgaactgcgagcggtgtgacgacttccacaacgacctgccctggagaccagcc
gagggacgcagcaccaacgcctgcaagaagtgcaactgtaacagccattcgagccagtgc
cactttgacatggcggtgtatttggccatgggcaacctcagcggaggagtttgtgacgac
tgtgagcacaacaccatgggacgcaactgtgagatgtgcaaacccttctactacaaagac
cctatcaaggacatcagagacccacgagtctgcatagcttgcgactgcgacccggatggc
tctctgaacggagggatgtgcgacacccacaccgacccctccctcggcatgatgggaggt
cagtgccgctgcaaagccaatgtggaggggccgcgctgtgacaagtgtaagactggcttc
tttggcctgagcgccgacaaccctcagggctgccaaccctgccggtgtgacaacagggga
acagtgtcaggcagctcccagtgtgacccagtcagcggagactgcttctgcaagcgtctc
gtcactggacgcagctgtgaccagtgtttgccagaacactgggctctgagccacgacctg
aacggctgccgaggctgcgagtgtgatatcggaggagccctggacaaccactgctccatg
gagagcggtcagtgtcgctgccgcagtcacatgacagggcgccagtgtacgcaggtggag
tccagatatttcttcatggctctggatcacttcctgcatgaggctgagttcgccaaaatg
gggcagggctgtacattggagaccagggagcaccagccgggtcgccctgccacatggacg
ggcatcggattcgctcgggtacctgagggcggcaccctggagttcctcatcagtaacgtc
ccctactccatggaatatgacctgctcatccgctatgagacacagatgccacgagactgg
gaggaggtgcgaataacagtaatccgtccagggccgattccgacaagcagcccctgtgga
aacaccatcccggatgatgacagactcactgtctccctgccggctggagccaggtttgtg
gtccctcctaaagctgtgtgtctggagagaggtgtgacctacaccctccgctttgagttc
aaacgctatcaggacgccaacagtatcctcaacggagcggccaacgctgtcctccttgtt
gactctattgccttgatgccacgccattcctctatggacatgttcaacgcaggcgaccca
gcctccaacaacaggaagcagacttatgagcgataccgctgccatgaggcggcgaagagt
gtaacacgcccactgatgagtgacacctgtgccaaactaatcaccagcatgtcggccatc
gtaaatgacggggctctggcttgtaattgcgatcctcaggggtccatcagctccatgtgt
gacgtccgcgggggccaatgtcagtgcaggcccaatgtgattggtcgacgctgtgaccag
tgtgctccgggaacttacggctttggaccctcaggctgcatagcctgcggttgcagcttg
gaaggctctgttacccgactttgcgacaagttaaccggtcagtgccagtgccgtccagga
gcgtttggtcagcgctgcgacggatgccaggcgggtcactggggcttccccagctgccga
ccctgccagtgtaacggacacgcagaccagtgcgaccagaggaccggagcctgcgtcagc
tgcagggacaacacaggaggagacaagtgtgacaggtgtgccaatggttactatggtaac
ccaattttgggcaaagcatccagtgctcagtgtcgcccatgcccctgtccagacggcccc
aacagcggacgccactttgctgcgtcttgttaccaggacaaccgtaacagacaaattatc
tgcaactgtaaccagggctacacaggagcccgatgtgaggaatgcgctccgggttattat
ggcaacccctctcagcctggagggcgctgtcagccgtgccagtgcaacaacaacatagac
atgtcagacatggagtcttgcgacaggcagaccggacagtgccggaaatgcctttacaac
accgagggccccagctgtggcatctgcaagagcagctatttcggcgacgcttcccgacgc
aactgcaggaagtgcacatgtaacttcctgggtactgaccgtggccagtgcatggagcgt
gaggactgtgtgtgccagcgagcaacagggcagtgccagtgtcttccaaacgtcataggt
ctgacatgtgaccactgcgcccccaaccactggaacctggccagcgggacagactgtgaa
ccctgcggctgtgatctcaacaactcggtcacctcctcatgtaatgagtttactgggcag
tgtcagtgccgtgatggcttcggcgggaagacctgcaccgactgtcaggagaactactgg
ggagaccccaggacacagtgcagagcttgcgactgtgactggcggggcatcgagacctct
cagtgcaacaggttgaccggccactgtgtttgccagcagggggtgtcaggtgtccgctgt
gaccagtgtgccagaggcttctctggccagttccctaactgtcagccctgtcacaagtgc
ttcggggactgggatcgcatcgtgcaggacctggcagtgcgcaccaagactctggcagag
cgggcccatgatattcagaccactgggcttactggggcctatgagaaggccttcagggat
ctggaggagaaactggcacaagctcggggaattgtcgacggacgcaacgccactgctgca
gctgtcgctaccctaatggaacttattgaagagcttagagagcagatcggtgacaccact
gacaccctgaaccgtctggaaggagaactaaccaacgtccaggacagcaactctgaggca
agcaaggagctgagtgctctggagagagaagctaaagagctaaacctcacttcagagcag
ctacaccgccaactagatatcctgaaaaactccaacttcctaggtgcgtacgacagcatc
cgtacctcctacaacaagtctcgtgatgcagagcgccgtgccaatgaatcgacaaccacc
aggcccagcactgtcagccagtctgcagacacccgccgccgaaccgagcgcctcatcacc
gccaagaaggacgacttcaaccgtaaaaatgcagctaacaagcgggcgctttcagacctc
aacacctggtcacagggactggacttgaagaagatcaatgataaggtttgcggcgcccca
ggtgatgccccctgtggggaaagtccttgtgggggtgcgggttgccgcgacgatgaaggg
aaccgtcactgtggaggcctaaactgtaacggcgctgtagcagtagctgacaacgccctg
gagagagccaaacacgcagagaaggagctgaacaaagccatgggagaggtagagggactc
tttaccaaggtggcagatgccaagaccaaggcagaggaggccaagggtaaagcccaagca
gctctggacaaagccaccgccaccaagaacaaagtggagcgctccaacaatgacctgaga
gacctcatcaaacagatcagagacttcctcactcaggaaggtgcagacccggacagcatc
gaggcagtggcaaaccgcgtgttggagctctccatccccgcttcgcccctccaaatcaga
catcttgctgatgaaatcaaggagcgcgttcgcagcctttccaacgtggacgccatcttg
cagcagacacaggaagatgtccgcaaggcagagcagctgctgctggatgccaagagggca
aggcacagtgctgaggaggtgaagaacacagcagagacagtgaaacaggctctggtgggt
gctaagactgcacagacatcagcagagaaggccatcgcgagagccaaggtggacattggg
gagactgaagcccgactggcacagattgagtcggaaacatccaacagtgagaaggacctg
aatgaggccatggaccgcctgggcacactgggacaggagatcactgccctgaagaccaaa
cgggccaacaacagcatggcagcagcccgagccgaagagacagccaccatggcacgagac
aaggcaaacgaagccaagcagattctagacggccagctgacggataaataccatgaggtg
cagcagcgggttgacacaaaggccaaggctgtgcaggatgccaagaaaagagcagagagc
ctcagagatgaagcaaagggactactgagagatgcccagaacaagctaaagaggctagca
gagctggagaaaaactatgaggagaaccagaggaggttggaggggaaagctcgtcagctg
gacggtttggaggacaagatgaaagccatcctcagtgacatcaacaaacaaatccagatc
tacaacacatgccagtaa
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integrated database retrieval system