Anoplopoma fimbria (sablefish): 129099505
Help
Entry
129099505 CDS
T09102
Name
(RefSeq) cadherin-like protein 26
KO
K22658
cadherin 26
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129099505
Cell adhesion molecules [BR:
afb04515
]
Cadherins
Major cadherins
129099505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
DUF218
DUF4625
Motif
Other DBs
NCBI-GeneID:
129099505
NCBI-ProteinID:
XP_054464733
LinkDB
All DBs
Position
12:complement(22319535..22329287)
Genome browser
AA seq
747 aa
AA seq
DB search
MATIHLCLLLMLCLGVHSSSSEILKRHKRNWIIDSFKIDEGYKGSFPYVLGNIIIEKNYT
FFEISGQGVEADPKGILKIDERTGIITVHKPVNFEDYEVLQLQFKALDRSSRVVDTQLGI
EILIIDANDNPPKFYKEIYETSIKEATLQGTGITTVNANDDDRTEKFKLFDLKIVSVSPQ
PSDLEFYITQAPRTGRNTQASRTGTISFRGCLDHEVKDKYTIIVEAKGHGEETQLSSSCT
VIINIEDGNNHLPVITGQTGSGRVKEGEEKIIIKRVQVSDQDTEGTPAWKAKYQIQGDKN
NNFDITTDNKTNEGILSVVKHLNFEDGKMRNLTISVENLILPSFCQVVRRTTSGLWEVNT
SGSATGTGTFVPASSQVTVTVEDVNEAPFFKPPTQEATVGENEEAGKYLATFTAKDADGN
TFIYKKGHDPADWITVDPKNGKITTIKSFDRESEYVKDNVYMVKILAIDNGQPPMTGTAT
MTIHITDENDNTPFLNVSILDVCQSDGLSLANITCSDLDEDPYGGPFTFRLQEKEKGKWK
LDPTQGYTVNLVKEPTVHSGEYELLLEVFDRQGERSAHNMSITVCNCVDPARPNCRTRKA
ASPTTGYEFQTDIGIKTSDFMNKRLSNLQAPGEELVDYAPREYAEEGDTTNSVELDAISI
LDIPLDPDLDMDLDYKFNGRGRVRRRNIQLETEAAKTGENIHVSHRVLKERNIPGGRALA
VSQTFMKRRVYAIFARQWPDQVEAHTC
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatacacctctgtcttctcctcatgctgtgtttgggagtccactcttcatct
tcagaaattttgaagcgacacaaaagaaactggatcattgattcctttaaaatcgacgaa
ggctataaaggatctttcccatacgtactgggcaatattataattgagaagaactacacc
tttttcgagataagcggtcaaggtgttgaagcagaccccaagggcatattaaaaattgat
gaacgcacagggattattacagtccacaaacctgtcaactttgaggactacgaagtttta
cagctacagttcaaagcacttgacagatccagtagagtcgtagacacgcagctgggcatt
gagatattgattatcgacgccaatgataaccctccaaagttttacaaagaaatttacgag
accagcataaaagaggcaacattacaaggcactggcataactacagttaatgcaaacgat
gatgacagaactgagaagtttaaattatttgatttaaagatagtctcagtcagtcctcaa
ccatccgatctggagttctacataactcaggcccctcgaactggaagaaatactcaggcc
tctcgaactggaaccatttcatttagagggtgtctggaccatgaggtgaaagataaatac
accattatagtggaggccaaaggccatggagaggaaacacagttatccagctcctgcacc
gtcataatcaacatagaagatggaaataaccatctgcccgttataactggacaaacaggt
tcagggagagtgaaagaaggagaggaaaaaataattattaaacgtgtgcaagtttcggac
caagacaccgaaggtacaccggcatggaaagccaagtatcaaattcaaggagacaaaaac
aacaacttcgatatcactactgataataagaccaatgaaggaatactgtctgttgtaaag
catctgaacttcgaagatggtaaaatgaggaatctgactatcagtgtagagaatttgatc
ctcccttccttttgtcaagtggtgcgacgcaccacctctggtctatgggaagtaaacact
tctggcagtgcgaccgggacagggacatttgttccggcctccagccaagtgacagtgact
gtggaggatgtcaacgaggctccattcttcaaaccgcctacacaagaagctacggtgggc
gagaatgaagaggctggaaagtatctggctacatttacggcaaaagacgctgacggcaac
acatttatatacaagaagggacacgatccagctgattggattacagtggaccccaagaac
ggaaaaataaccacgataaagtccttcgacagggagtcggaatatgtgaaagacaatgta
tatatggtcaagatattagctatcgacaatggtcagccgccaatgacaggcactgcaacc
atgacaatccatataacagatgagaacgacaataccccattcctgaatgtgagcatctta
gacgtgtgccaatctgatggactctcgctggccaacatcacttgctcggacctggatgaa
gacccctacggtggaccgttcaccttcaggctccaggaaaaagagaagggcaagtggaag
cttgacccaacgcaagggtatacagtcaacctggtgaaagagcccacagttcattcagga
gaatatgagttgttgctggaagtgtttgaccgtcagggtgagagatctgcacacaacatg
tcaattactgtgtgtaattgcgtggacccggcgaggccaaactgtcgcacccgcaaagct
gccagccccaccacagggtatgaattccaaaccgatatcggcataaagacaagtgacttc
atgaataagaggctgtccaacctccaggcaccaggagaggagctggtggattacgctcct
cgtgagtatgctgaggagggagacacgacgaacagcgttgagcttgatgccatctccatc
cttgacattccccttgacccagacttggacatggacctggattacaagttcaatgggcgg
gggagggttcgcaggaggaacatccagctggagactgaggctgcaaagaccggagagaat
attcacgtctcccacagagtccttaaggagaggaacataccaggtgggagagctctagct
gtgtctcagaccttcatgaagcgaagggtttatgccatctttgcgcggcagtggcctgac
caggtggaagctcacacatgttag
DBGET
integrated database retrieval system
