KEGG   Anoplopoma fimbria (sablefish): 129099530
Entry
129099530         CDS       T09102                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb00310  Lysine degradation
afb01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:afb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    129099530 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129099530 (plod1a)
Enzymes [BR:afb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     129099530 (plod1a)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129099530 (plod1a)
SSDB
Motif
Pfam: GT_PLOD 2OG-FeII_Oxy OGFOD2-like Anp1 2OG-FeII_Oxy_3 YjbQ
Other DBs
NCBI-GeneID: 129099530
NCBI-ProteinID: XP_054464761
LinkDB
Position
12:complement(8347250..8369837)
AA seq 730 aa
MRLPPLLLFAGICALSPLIHCEEQRVPEEKLLVVTVATKETDGFKRFIRSAEHFNYTVKV
LGEGEIWKSGDYMSAPGGGQKVRLLKAALEEMKDEDRIILFIDSYDVVFASGPKELLKKF
QQARHKVVFSSESLIWPDRHLEDKHPHVVEGNRFLGSGGFIGYLPNIKEMVADWTGEDND
SDQLFFTKIYIDPVKRKATNITLDRKCRLFQNLHGALDEVMLKFEDGRVRARNVLYDTLP
VVIHGNGPTKLQINYLGNYIPNTWTFETGCTACHEDLHPLSALKESEYPLVVIGIFIQQP
TPFVSVFFERLLKLQYPKNRLKLFIYNREAHHEGHISSFLKDHGSLYQDVKLVGPEKEMD
QAASRSLGFDMCRKDKDCDYFFLLDIEVVLKNENTLKILIEQNLPIVAPMITRVGRLWSN
FWGALSADGYYARSEDYVDIVQGRRVGVWNVPYVSSVYLVKASLLRSELSDYELFTSNLL
DPDMAYCHNIRSKGIFIYVTNMHTFGRILSTENYQTSHLHNDLWQIFENIVDWQERYIHE
NYTRIMKDKLIETPCPDVYWFPIFSDVACDHIVEEMEHFGKWSGGANTDNRIQGGYENVP
TIDIHMIQINYEKEWQKFLLEYIAPITEKMYPGYYTKAQFELAFVVRYKPDEQPSLRPHH
DASTFTINIALNQLGPDYQGGGCRFLRYDCSIQAPRKGWTLMHPGRLTHYHEGLPTTAGV
RYIAVSFVDP
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgagacttccacccttgttgttgtttgcagggatctgtgcactctcccctctgatacac
tgcgaagagcagcgagtccccgaagagaaacttctagttgtgactgttgcaaccaaagag
acggatggcttcaagcgcttcattcgctcagctgaacattttaactacactgtcaaggtt
cttggtgagggtgagatatggaagtcaggcgattacatgtcagctccagggggaggccag
aaagtacgactcctcaaagcagctctggaggagatgaaggatgaggacagaatcatcctt
ttcattgacagctatgatgtggttttcgcctctggccccaaagagctgctcaagaagttc
cagcaggccagacacaaggtggtgttctcctctgagagcctgatttggcccgacagacac
ctggaggacaaacacccccacgtcgtcgagggcaacaggttcctaggctcaggaggtttc
attggctaccttcccaacatcaaagaaatggttgctgattggaccggagaagacaatgac
agcgaccagcttttcttcaccaagatttacattgatccggttaaaaggaaagccaccaat
atcactctggaccgcaaatgcagattgttccagaaccttcatggagccctcgacgaggtg
atgctgaagtttgaggacgggcgagtacgagccagaaatgtgctctatgatacgcttcct
gtcgtcatccatgggaacggaccaaccaagctgcagatcaactaccttggtaactacatc
cccaacacgtggacatttgagacaggctgcacggcgtgtcacgaggatctccacccactc
tcagctcttaaggagagtgaatacccactggtggtcattggcatcttcattcagcagccc
accccttttgtgtcagtgttctttgaacgcctactgaagctccagtatcccaagaacaga
ctcaaactcttcatctacaacagggaagctcatcacgagggccatatcagctcttttctg
aaggatcatggaagcctttatcaggacgtcaagctggtcggccctgaaaaggagatggac
caagctgcctcccgcagcctgggctttgatatgtgccggaaggacaaggactgtgactat
ttcttcctcctggacattgaagtggtcctaaagaacgagaacacacttaaaattctgatt
gaacaaaaccttcctattgtggcaccgatgataactcgcgttggtcgactgtggagcaac
ttctggggagccctcagtgcagatggctactacgcccggtctgaggactacgtggacata
gttcaaggacgcagagtgggtgtgtggaacgtcccgtacgtgtccagtgtgtacctggtg
aaggccagcctccttcgatcagagctctcagactacgagctgtttacctcaaacctccta
gacccggacatggcttactgccacaacatccgcagcaagggaatcttcatatatgtaacc
aacatgcacactttcggtcgcatcctgtcaacagaaaactatcagacgagccatcttcat
aatgatctgtggcagatctttgaaaacatagtggactggcaggagcgctacattcatgag
aactacactcgcatcatgaaagataagctgattgaaactccttgtcctgatgtctactgg
ttcccaattttctctgatgttgcttgtgaccacattgttgaagaaatggaacattttggg
aagtggtcaggaggagccaatacggacaacagaatccaaggaggctatgagaacgtcccc
acgatcgacatccacatgattcagatcaactatgaaaaggaatggcagaagttcttactg
gagtatatagcgccgataacagagaaaatgtaccctggttactacaccaaggctcagttt
gaattggcctttgtagttagatataagccagatgagcagccgtctttgagaccacaccat
gacgcctccacattcactataaacattgcactcaatcaactgggccctgattaccaggga
ggtggatgcaggttcctacgctacgactgctccattcaggctcctcgtaaaggctggacc
ctcatgcacccgggccgcctcacccactaccatgaaggcctgcccaccaccgccggcgtg
cgctacatcgcagtgtccttcgtggatccctga

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