Anoplopoma fimbria (sablefish): 129099558
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Entry
129099558 CDS
T09102
Symbol
prex1
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
afb
Anoplopoma fimbria (sablefish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ
PDZ_6
PH_10
PH
Motif
Other DBs
NCBI-GeneID:
129099558
NCBI-ProteinID:
XP_054464805
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All DBs
Position
12:complement(4810581..4887765)
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AA seq
1645 aa
AA seq
DB search
MEEDDGHHENGIHATRDSDRQQRLRLCVLTEVLNTERDYVRTLLFLQSAFLQRIRQTADD
QQCLSPEHVKILFSNIEDILELHKEVLSAVENSLQPNPHPQHALGHVFLKFKKSFSVYGE
YCSNHEKALRLLVELNKISNIRTFLLHCMLLGGKKSTDIPLEGYLLSPIQRICKYPLLLK
ELLKRTPKKHADYPAVEEALQAMKAVCSNINETKRQMEKLEALEQLQSHIEGWEGTNLTD
ICTELLLHGNLLKISAGNIQERVFFLFDNLLVYCKRKSRVSGKKSTKRTKSINGPLYVFR
GRINTEVMEVENVEDGTADYHSNNYTVTNGWKIHNTAKNKWFVCMAKHAEDKQKWLDAIL
REREQRECLKLGMERDAYVMIAEKGDKLYHMMMTKSRHLIKDRRRKLSIVPKCFMGNEFV
SWLMESGEISKPDEGVNLGQALLENGIIHHVSDKHQFKNEQVLYRFRYDDGTYKARSEME
DIMSKGVRLYCRLHSLHTPVIKDRDHHLKTFKSVVPASKLVEWLLLQGDYSTREDAVTLG
VGLCNNGFMHHVLEKSEFKDESQFFRFYADEEMEGTSTKSKQLQRNDFKLIENILAKSLV
IHPEEEDYGFEIEEKNKAIVVKSVTRGSHAEMAGLQVGRKIFTINEDLLFLRPFSEVETM
ISQSFCIRRSLRLLVATKAKEIVKIPDNPDSLSFRLCGSAPPHVHAVRKGWEAAGAGLQP
GQVVLKVNGNNVNRSDYQEALEHFAAQHTHQDPPKACQWVYRAFEDVEELQRERGAGEKV
ESPFSPYPVENGSDHEEENGTNGTDHRLCRLSLSNELPLVSMTVDNVHLEHGVVYEYVST
AGIKSHVLEKMVEPKGCFSLTAKILEAFSGDDSLFVRNCSQLISQSDRVVTMPQYEFRQI
CDTKLESIRRRISSYQQFALELRNKAWPSFRQAGVRPHPLGCMDFVPTNCHVNFMQVSYP
KSTTTAGRTFSIRFGRKNSLYGLDPDQAQLNPMSHTQHCVTSMGAPSWSCSGMDGDEADG
SEEVSVDGGDGSMDSRRGGHGEGGLSFLLKQEDTETQDAYIHLYSRLDVAVREMRQYVAQ
IDVLLSSITEPTELQGEGGEPPTYEPSQPPSLAPCEDGCDQDKVEQGGIKRVCFKVNEDD
QEDSGHDTMSYRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPCDMRISSDKQ
DKLHGCLEHLFNQVDSINNLLRGTVMTKACEETKHFYSDHSQPEFRQTEDWTVRCRYIIH
KNIQEDPWNLPNSIKTLVESLQRFVDDGKNQLLLALLKCTDTSLQLRRDVIFCQAATGAL
CALAEQLLAALRSRFNNAGEYQDDGKETSRKWLEQISVIGVLLHFQSTLAPHLKEERTML
EDTKAALLDLDKVTVFFRQLEDECLVTNTPVCYQVEGSRQALRVTLYLDSCHFSELPTRL
QNGGSLKLQTVLFTRALERPEGVSQQDYSAMEEFQQRTNAVSLEKVKAYYRRLRAFYLEK
SNLPTDSNTTAMKIDQLLRPLNTLDDLCRLMQSYVNVRPSTQGHPSGVSVLCVSSELCNR
LGACHITMCGTGMQRCTLNVTLEQSMILARNHGLMPRCIMQTMDIMRKQGARVELSAKNL
KVMDQMPASFPRLFKLCLPPSDGDF
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacgacgggcatcacgagaacggcatccacgccaccagggactcggaccgg
cagcagcggctccggctgtgcgtgctgacggaggtcctgaacacggagcgggactatgtg
cggactctgctcttcctccagtcggcgtttttacaaagaatccgacagactgcagatgac
caacagtgcctctcacccgaacatgtcaagattctgttttcaaatattgaggacatcctg
gagttgcacaaagaggtgctgtctgcagtggagaacagtctgcagcccaatccccatcct
cagcatgcactgggacacgtgttcctgaagtttaagaagagtttctcggtgtacggcgag
tactgcagtaaccacgagaaggctctgcgacttctcgtggagctaaacaaaatctccaac
atcaggaccttcctgctgcactgcatgctacttggagggaagaaaagcacagatattccc
ctggagggctaccttctctcccccattcagaggatttgcaagtaccctcttctgctgaag
gagctgctgaagcggaccccgaagaagcacgctgactatccggcagtggaagaggctctg
caggccatgaaggccgtctgctccaacatcaacgagaccaagaggcagatggagaaactg
gaggctctggaacagctgcagtcgcacatcgagggctgggagggaaccaacctgacagat
atctgcacggagttgctgcttcatggaaatctcctgaaaatctcagcgggcaatatccag
gaacgtgtcttcttcctgttcgacaaccttttggtttactgtaagaggaagtccagggtt
tctggaaagaagtccaccaagaggaccaagtccatcaacgggcccctctatgtgttcaga
ggccgaatcaacaccgaggtgatggaggtggaaaatgtggaggatggaacagcggactat
cacagcaacaactacacggtgacgaacggctggaagatccacaacacggctaaaaacaag
tggtttgtctgcatggccaaacacgcagaggacaagcagaagtggctggatgccatcttg
agggaacgggagcagagagaatgcctcaaactcgggatggagcgggatgcctacgtgatg
atagcagagaagggggataagctctaccacatgatgatgaccaagagtcggcacctcatt
aaggatcgacgcaggaagctcagcattgtgcccaagtgcttcatgggaaatgagtttgtg
tcgtggctgatggagagcggagagatcagtaagcctgacgaaggggtcaacctgggacaa
gccttgctggaaaatggcatcattcaccacgtgtcagacaagcaccagttcaagaacgag
caggtgttgtaccgattccgctacgatgatggcacctacaaggcccgcagtgagatggag
gacatcatgtcaaagggcgtcaggctgtactgccgccttcacagcctccacacgcctgtc
atcaaggacagagaccaccatctgaaaaccttcaaatctgtggtgcctgccagcaaactg
gtcgaatggctactcttgcagggagactactcgacccgagaggacgcggtgacgcttggc
gtggggctctgcaacaatggcttcatgcaccacgtcttggagaagagcgagttcaaagac
gagtcccagttcttccgtttctatgcggacgaggagatggagggaaccagcaccaagagc
aagcagctccagcgcaatgacttcaaactcatcgaaaacatcttggccaagtccctggtg
attcaccctgaggaagaagactacggctttgagatcgaggagaaaaacaaggccattgtg
gtgaaatctgtcaccaggggctcacatgctgagatggctggcctgcaggtgggcaggaag
atcttcaccatcaacgaggacctgctgttcctcaggcccttctccgaggtggagaccatg
atcagccagtccttctgcatacggcgctccctgcggctgctggtcgccaccaaggccaaa
gagattgtgaagatccctgacaacccggacagcctgtccttcagactctgtggctctgcc
cctcctcatgtccacgctgtcaggaaaggctgggaggcagcgggggcgggtcttcagcct
ggccaggtcgtcctgaaggtcaacggcaacaacgtcaaccgcagcgactaccaagaggcc
cttgagcacttcgccgcgcagcacacgcaccaggatcctcccaaagcgtgtcagtgggtg
tatcgtgcattcgaagatgtggaagagctccaaagagaaaggggtgcgggcgaaaaggtg
gagagtcctttcagtccttatccagtggagaacggttctgaccacgaggaggagaacggc
accaatggaacagaccaccggctgtgcagactctccctctccaatgagctgccgctggtc
agcatgacggtagacaacgtccacctggagcacggcgtcgtctatgaatacgtcagcacc
gccggcatcaagagccacgtcctggagaagatggtggagcccaagggctgcttcagcctc
actgctaagatcctggaggcattctctggcgatgacagcctctttgttcgtaactgcagc
cagctcatctcccagagtgaccgagtcgttaccatgcctcagtacgagttcagacaaatc
tgtgacaccaagctggagagtatccgacggcggatcagcagctatcagcagttcgccctg
gagctgaggaacaaagcgtggccctccttcaggcaggccggcgtacgccctcacccgctg
ggctgcatggactttgttcccaccaactgccacgtcaacttcatgcaggtctcctacccc
aagagcactaccacggctggcaggacattcagcatccgttttgggcgcaagaactccctg
tatggcctggaccctgaccaagcacaactgaaccccatgtcccacacccagcactgtgtg
accagcatgggcgctccctcctggagctgctccggcatggacggggacgaggcggacggc
agcgaggaggtgagcgtggatggaggcgacgggtcgatggacagtcggcgtggcggccac
ggggaaggcgggttgagtttcctgctcaaacaggaagacacggagacccaggacgcctac
attcacctgtacagccgcctggacgtcgctgtaagggagatgaggcagtatgtcgctcag
atagatgtcctcttgtcgtctatcaccgagcccacggaactccaaggggagggcggggag
cctccgacctacgagcccagccagccgccctctctggccccctgcgaggacggctgcgac
caggacaaagttgagcaaggcggcattaaaagggtctgcttcaaggtgaacgaggatgac
caggaggactcgggccacgacacgatgagctacagggactcctacagtgaatgcaacagc
aacagagactcagtcctgtcctacaccagtgtgcgaagtaacagctcctacctggggagc
gacgagatgggatcaggggatgagctgccgtgtgacatgaggatttcctcggacaagcag
gacaagctgcacggctgcctcgagcaccttttcaaccaggtcgactccattaacaaccta
ctcagaggaactgtcatgaccaaggcctgtgaggagaccaagcacttttactctgaccac
agccaaccagagttccgacaaacagaagattggacggttcgttgtcgctacatcatccac
aagaacatccaggaggacccttggaacctgcccaactctatcaaaaccctggtggagagc
ctgcagcgattcgtggacgatggaaagaaccagctactcctggctctgctgaagtgcaca
gacacgtctctgcagctgcgacgggatgtgatcttctgccaggcggcgacgggcgccctg
tgcgcgctggcggagcagctgttggcggccctgcggtcgcggttcaacaacgccggcgag
taccaggatgacggcaaggagaccagccgcaagtggctggagcaaatatctgtcattggc
gtgctgctgcacttccagtccacgctggcgccacacctaaaagaagagcggaccatgctg
gaggacaccaaggcagccctgttggatttggacaaagtcactgtgttcttcaggcaactg
gaggacgagtgtctagtcacaaacacaccagtgtgttaccaggtggagggcagtcgacag
gcgctgagggtcaccctgtacctggacagctgtcacttcagcgagctgcccacccggctg
caaaatggaggcagcctcaagctgcagaccgtcctcttcaccagggcactggagcgtcca
gagggagtttcccagcaggactactcggccatggaggagttccagcagcgcaccaacgct
gtctcactggagaaggtcaaggcctactaccgcagactcagggctttctatttggagaag
tccaacctccctacggactcaaacaccacagcaatgaagatagaccagttgctgcgaccc
ctcaacacgctggacgatctgtgtcgactaatgcagtcctacgtcaacgtgcgcccgagc
acccagggccacccgtcgggtgtcagcgtgctgtgtgtgtcctcggagctgtgtaaccgc
ctcggagcctgccacatcaccatgtgcggcacaggcatgcagagatgtaccctgaatgtg
acactggagcagtccatgatcttagccaggaaccacggcctcatgccgcgctgcatcatg
cagaccatggatataatgcgcaaacagggagcaagagttgagctctctgctaaaaatctc
aaggtaatggaccagatgcctgcatccttcccaagactcttcaagctgtgtttgccacct
tcagatggagatttctaa
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integrated database retrieval system
