Anoplopoma fimbria (sablefish): 129099569
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Entry
129099569 CDS
T09102
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129099569 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129099569 (scn8aa)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129099569 (scn8aa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
FraC
HpsJ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
129099569
NCBI-ProteinID:
XP_054464823
LinkDB
All DBs
Position
12:12391801..12428625
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AA seq
1959 aa
AA seq
DB search
MAAPIIAPPGPASFRKFTVESLATIELRINEEKNRKPPKQDSSYRDDDDDNKPKPNSDLE
AGKSLPFIYGDTPKGLVAVPLEDLDPYYLNSQKTFIVLNRGKTIFRFSATPALYFISPLN
PFRRVAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKICA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINTTKTIDWKEYIM
NDTNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLALFRLM
TQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATMEEALQ
KEEEFKAMLEQLKRQQEDAQTAAMATSAGTVSEDAVEDDGGGRLSCSSSEMSKLSSKSAK
ERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMNQSLLSIP
GSPFLSRHNSKSSIFSFKGRNKDVGSENEFADDEHSTVEECEERRGSLFSPYRRNSYSGF
HGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAATDDSPTTEVEVKKKLSGSLMVSVDQ
LNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECSPEWIKIKEIM
NLIVMDPFVDLAITICIVLNTLFMAMEHYPMTTDFEDMLSVGNLVFTGIFAGEMLFKLVA
MDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIK
IIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISLDCELPRWHMNDFFHSF
LIVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLA
ATDDDGEPNNLQISVRRIKIGIAWIKAKMRIVMASLLKKPQMEDEQKPLDDMYDKKLNCI
ANHTGVDINRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVGESDF
ENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVVEVEVVEPVEEYLEPEACWTDGC
VAKYKCCDVDISTGWWKRWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQR
KTVRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLVANALG
YSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMG
VNLFAGKYYYCFNQTSEEYFSVDVVNNKTQCVALMNQNFTEVRWKNVKINFDNVGAGYLA
LLQVATFKGWMDIMYAAVDSREVEDQPNYEVNIYMYIYFVVFIIFGSFFTLNLFIGVIID
NFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDFVTQQVFD
ISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFTTEFLLKLFALRHYYFTNGW
NIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALM
MSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIILFMITTSA
GWDGLLLPILNYPPDCDPTLENPGTNVKGDCGNPSVGIFFFVMYIIISFLIVVNMYIAII
LENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADTLEHPLRVPKPN
TIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVQANPSKVSYEP
ITTTLRRKQEDVSARTIQNAYRTHLIRRGIIFRRHIFTNNKFENGGTNQEKKESTPSTAS
LPSYDSVTKPDKEKQDEKKDEWARKEKDKNQKDEWESKC
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacccattattgcaccgccaggacctgctagctttaggaagtttactgtggaa
tctttggcgactattgagctgcgcatcaatgaggagaagaaccggaagccacccaagcag
gacagcagctaccgcgacgatgatgatgacaacaagcccaagcccaacagcgacctggag
gctgggaagagcctgcccttcatctatggggacacccctaagggactggtggcggtacca
ctggaggatctagacccatactacctgaattctcagaaaacatttatagtgctaaataga
gggaagacaatcttccgttttagtgccacacctgccttgtacttcataagtcctttaaat
ccgtttaggcgagtagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagtgatcctcccgagtggtcaaaa
caagtagagtacacattcacaggaatttatacatttgagtctcttgtaaaaatctgcgca
cgaggcttctgtatagatgggtttacattcctaagagatccatggaactggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagacc
attgtgggcgctttgatccagtctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgcctgagcgtctttgccctcatcggtctccagctcttcatgggcaacctgcgtcac
aagtgtgtaatctggccgatcaacaccaccaagaccatcgactggaaggagtacatcatg
aacgacaccaatttctacttcctgcctggccagttggatgctcttctctgtgggaacagc
tccgactctggccgctgcccagagggctacacatgcatgaaagctgggaggaatccaaac
tatggctacaccagctttgacagcttcggctgggccttcctggctctcttccgactcatg
acacaggacttctgggaaaacctttacatgctgaccctgagggctgcaggaaagacctac
atgatcttctttgtattggtgatctttgtgggctcgttctacttggtgaatctgatcttg
gctgtggtggccatggcctacgaggagcagaaccaggccaccatggaggaggccctgcag
aaggaggaggaattcaaggccatgctggagcagctcaagagacaacaggaagacgcccag
acggctgccatggcaacctctgcgggtacagtgtcggaggacgcagtggaggatgatgga
ggagggcgtctgtcatgcagttcctctgagatgtcaaagctcagctccaagagtgcaaaa
gagcgacgtaatcgtaagaagaagtggcggcagaaagagcaggagaaggagaaaggcgac
agtgagaagtttgtcaagtcagagtcggatgacggcagcaagaggagccgcttccgtttc
cctgataatcgcctgggtcgaaagtcttccatcatgaaccagtccctcctcagcataccc
ggctcgcccttcctgtcccgccacaacagcaagagcagcatcttcagtttcaagggccgc
aataaggacgtgggctcggagaacgagtttgccgacgacgagcacagcacggttgaggag
tgcgaggagcgccgggggtccctgttcagcccttaccgacggaacagctacagcggcttt
cacgggaagaggaacagcacggtggattgcaacggcgtggtgtcgctcatcggccctggg
cccggtggacgccttctgcctgaggtgaaaatagataaggcagctactgacgacagtccg
actactgaggttgaggtgaagaagaagctgtcgggctccctgatggtgtctgtggaccag
ctcaatacctcctttgggcggaaagagcgggccaacagtgtcatgagcgtcattaccaac
acactagtggaggaactggaggagtcccagcgaaagtgtccgccatgctggtataagttt
tctaacacattcctgatctgggagtgctcccccgagtggattaagatcaaggaaattatg
aacctgattgtcatggaccccttcgtggacttagccattaccatctgtatcgtgctcaac
accctcttcatggcaatggagcactaccccatgaccaccgactttgaagatatgctgtct
gtaggcaatctggtattcacagggatctttgcaggggagatgcttttcaagctcgtggct
atggatccatattactacttccaggaggcctggaactgttttgacggcttcattgttacg
ctgagtttagtggagctggctctggccgacgtcgagggcctgtctgtgctgcggtcattc
cgattgctgagagtgtttaagctggccaagtcgtggcctaccctcaacatgctgatcaag
atcattggtaactctgtgggagccctggggaacctgacactggtgctggccatcatcgtc
ttcatctttgctgtggtgggcatgcagctgtttggcaagagctacaaagactgtgtgtgt
aaaatctctcttgactgtgagttgccccgctggcacatgaatgacttcttccactccttc
ctgatcgtcttccgggtgctgtgtggtgaatggattgagaccatgtgggactgcatggag
gtggcgggccagggcatgtgcctcattgtcttcatgatggtcatggttatcggtaacctg
gtggtgttgaacctgttccttgccttgctgctgagctctttcagtgctgacaacttggct
gcgacagatgacgatggtgagcccaacaacctgcagatatccgtcaggcgtatcaagata
ggcattgcatggataaaagccaagatgcggatagtgatggccagtctgctgaagaaacct
cagatggaggacgagcagaagcctttggatgacatgtacgacaagaagctgaactgcatc
gctaaccacaccggggtggacatcaaccgtgacctggactatgccaagaatggtaacggc
accaccagcggtattggcagcagtgttggcaagtatatgatcgatgaggaccacatgtca
ttcatccacaacccaaacctgaccgtctgcgtgcccatcgctgtgggagagtctgatttt
gaaaacctcaacacagaggacttcagcagcgagtcggaaaacgagaacagcaaagagctg
gatgacaccagttcgtcagagggcagcactattgacatcaagccagacgtggtggaggtg
gaggtggtcgagccggtggaggaatacttggaaccagaggcgtgttggacagatggttgt
gtggccaagtataagtgctgtgacgttgacatttctacgggctggtggaagagatggtgg
tacctcagaaaaacctgctacctgattgtggaacataactggtttgagaccctcatcatc
ttcatgatcctcctcagtagcggtgccctggcctttgaggatgtgtacatcgagcagagg
aagaccgttcggatcattttggaatacgccgacagggttttcacctacatcttcatcctg
gagatgttgctgaaatgggtcgcctacggttttgtcaagtatttcaccaacgcctggtgt
tggctggatttcttcattgtggatgtgtctatagtcagccttgtagctaatgcgctgggc
tactccgatctagggcccattaaatcactcaggacactaagggccttgagacccctcaga
gccttgtcacgttttgaagggatgagggtggtagtcaacgccttggtgggtgccatccct
tccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagtatcatgggg
gtcaacttgtttgcgggcaagtactactactgtttcaatcaaacatcggaggaatacttt
tccgtcgacgttgtcaacaacaagacccagtgtgtggccctcatgaatcaaaactttacc
gaggtcaggtggaagaacgtcaagatcaactttgacaatgtgggcgccggctacctggcc
ctgcttcaagtggccacattcaaaggttggatggacattatgtacgcggctgtggattcc
agagaggtagaagaccagcccaactatgaagtcaacatctacatgtacatctactttgtg
gttttcatcatatttgggtccttcttcaccctcaacctcttcattggtgtgatcattgac
aacttcaaccagcagaagaaaaagttcggaggtcaggatatattcatgacagaggaacag
aaaaagtactacaatgccatgaaaaaactggggtccaaaaagccacaaaaacctattcct
cgaccacagaacaagatccagggcatggtgtttgactttgtgacacagcaggtctttgac
atctccatcatgattctcatctgcctcaacatggttaccatgatggtggaaacagacgat
cagtcagacgaaacggagaacgtcctctactgggtcaacttcatctttattgtagtcttc
accacagagttcttgctaaagctttttgcccttcgccactattacttcaccaatggctgg
aatatctttgacgtggtggtggtcattctgtctattgtcggcatgttcctggctgacatc
attgaaaagtactttgtgtcaccaaccctctttagggtgatcaggttggctcgtatagga
cgtatcctccgtctaatcaaaggagctaagggcattcggactttactctttgccctgatg
atgtcactgccagcccttttcaacattggcctattgctcttcctggtcatgttcatcttc
tccatcttcggcatgtctaactttggctacgtaaaacacggagcgggaattgacgacctg
tacaactttgagacctttggcaacagcatgatcattctgttcatgatcaccacgtcagcc
ggatgggacggcttgttgctgccgatcctcaactacccaccggactgcgatcctacgttg
gagaaccctggtacaaacgtgaagggcgactgtggtaacccctcagttggaatcttcttt
tttgtcatgtatatcatcatttctttcctaattgtggtcaacatgtacattgcgatcatc
ctggaaaacttcagcgtggccacagaggaaagtgctgatccactcagtgaggacgacttt
gagaccttctacgagatctgggagaagtttgacccaactgcctctcagttcattactttt
gcaaagttgtctgactttgcagacacgctggagcacccacttcgtgtgccgaaacccaac
actatcgaacttattgccatggacatgccaatggtgagtggcgatcgtattcactgcctg
gacatcctgtttgccttcacaaagcgagtgctgggtgacagtggcgagttggacatgctg
agacaacagatggaggagcgttttgtgcaggccaacccctccaaggtgtcgtatgaaccc
atcaccactactcttcgccgcaaacaggaggatgtctctgccagaactatccagaatgcc
taccgcacccacctcatccggcgcggaatcatcttcaggcgtcacatttttactaacaat
aagtttgagaatggcgggaccaaccaagagaagaaggagagcacaccatccacagcctct
ctgccctcctacgacagcgtgaccaaacctgacaaggaaaagcaggacgaaaaaaaggac
gaatgggccaggaaagagaaggacaaaaaccaaaaagatgagtgggaatccaagtgttaa
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