Anoplopoma fimbria (sablefish): 129099612
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Entry
129099612 CDS
T09102
Symbol
ythdf1
Name
(RefSeq) YTH domain-containing family protein 1 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129099612 (ythdf1)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129099612 (ythdf1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
129099612
NCBI-ProteinID:
XP_054464892
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Position
12:complement(19296702..19302842)
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AA seq
628 aa
AA seq
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MMSAASIDPQTTKGQDASKGHLLQRQCLSSRQAFPVSVQNGSLHQKETVHDNDFEPYLTN
QSNQNNSYQSMTDPYLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFM
HDTVFGQPGGLSSSIYPHRFNFFPENPAFSTWGTSGSQGQQTQSSAYGGSYSYPPSSLGG
TLVPDGQTGFHSDTLSKAPGMNSIEQGMLGLKIGGDVTGGGSGVKNAGSLGGGSVAAAVA
TGNGGTPIGMPPPKQTSWAAIASKPAKLQQQKTKNKPGTPIAGGGLPPPPIKHNMDIDTW
DNKGALTKMAPPLPQHHHHHHHHQQPQLHSHAHSLLPPLQQSIQSAQSLVQQMTMQGPPP
PPPQSYQNHNSAPTPQTRWIAPRNRNLCYGGGSLDSSGSSNGGGVGNGGGVGGVPPEPGS
ESHPVLEKLRAAHSYNPKEFDWSLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLD
SAFRAMNSKGPVYLLFSVNGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVNWLFVK
DVPNSQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIAQYKHTTSLFDDFSHYEKK
QEEEEVVKKSYEPAPIQSRPRIDQDRQK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgccgctagtattgaccctcagacaacgaaaggacaagatgcaagcaaaggt
catctcctccaaaggcagtgtttatccagcagacaggccttcccagtttcagtgcagaac
ggctcgctccaccagaaggaaacagttcatgacaatgactttgagccttatctcaccaac
cagtctaatcagaacaacagctatcaatccatgacagacccttacctgtccagctactat
gccccctccattggatttccttaccctctcagtgaggctccttggtccacagggggtgac
ccaccaattccctacctgaccccctatgcccccctcagcaatggagaccatcatttcatg
cacgacacagtgttcgggcagccgggggggctcagcagcagcatctatcctcacaggttt
aactttttcccggagaacccggccttctcaacctggggcaccagtgggtctcagggccag
cagactcagagctcagcctatggggggagttacagctacccacccagctctctaggaggc
accttagtcccggatggtcagactggtttccatagtgacaccctgagcaaggcaccaggt
atgaacagcattgagcagggcatgctgggcttaaaaataggtggggacgtgactggaggt
ggctcgggtgtgaagaacgcaggctccctcggaggtggcagtgtggctgcagctgttgcc
acgggcaacggtggcacaccaattggaatgccccctccgaaacagacatcgtgggctgct
attgctagtaaacctgccaagctgcagcaacaaaagaccaagaacaaacctggcacaccc
atagctggaggaggtctgcctccaccccccattaaacacaacatggacattgatacatgg
gataataaaggggctcttactaagatggcccctcctttgccccaacatcatcaccaccac
caccatcaccaacagccccagcttcactcccatgcccacagtctcctacccccccttcaa
cagtccatacagtctgcccagtccctcgtgcagcagatgaccatgcagggtcctccacct
cctcctccgcagtcttaccagaaccacaactccgctccaacacctcagacccgctggata
gccccacgcaaccgcaacctgtgctacggcggtggaagcctggacagcagcggctcctcc
aacggtggcggtgttggtaacggagggggcgtggggggtgtgcctccagagccgggatca
gagtcccaccctgtgctggagaagctgcgggcggcccacagctacaaccccaaggagttt
gactggagcctgaaaaacggacgcgtgttcatcatcaagagctactctgaggacgacatc
caccgctccatcaagtactccatctggtgcagcacggagcacggcaacaagcgtttggat
tcagccttcagagccatgaactctaaaggtcccgtctacttgttgttcagtgtcaacggc
agcggccatttctgcggcgtggccgaaatgcgctcgcccgtggactacggcaccagcgct
ggggtttgggcgcaggacaagtggaagggcaagtttgatgtgaactggttgtttgttaag
gacgtgcctaacagccagctgcgccacatccgcctggagaacaatgacaacaagccggtc
accaactcacgcgacactcaagaggttcctctggaaaaggcgaagcaggttctcaagatc
atcgcccagtacaaacacaccacctccctctttgacgacttttcccactatgagaagaag
caggaggaggaggaggtggtgaaaaagagctatgagcctgccccaatacagagccgaccc
cgaatcgatcaggatcgccaaaagtaa
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