Anoplopoma fimbria (sablefish): 129099614
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Entry
129099614 CDS
T09102
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129099614 (ybx1)
03019 Messenger RNA biogenesis [BR:
afb03019
]
129099614 (ybx1)
03041 Spliceosome [BR:
afb03041
]
129099614 (ybx1)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
129099614 (ybx1)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
129099614 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
129099614 (ybx1)
Spliceosome [BR:
afb03041
]
Common components
Common spliceosomal components
General mRNP proteins
129099614 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
129099614
NCBI-ProteinID:
XP_054464895
LinkDB
All DBs
Position
12:complement(223203..229733)
Genome browser
AA seq
302 aa
AA seq
DB search
MSSEADTQPPPEAPAADDDSPSSPAAAASAADKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGIAVQGSKYA
ADRNRYRRYPRRRGPPRGGEYPDNYQSDGEGEPPSGGREKGGSRDGGESAPEGDVQQQQR
RPAYPGRRRYPPYFGGEGDESQGGPDQGNKPARGTYYRGFRPRGPPRPRPVRDGEEDKEN
QGGEDGQNQQPRQRRYRRNFNYRRRRPQTGGKPGQETKEAKTGGDPPAEKTAAPEAQQGG
AE
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgacacccaaccaccacccgaggcccccgcggccgacgacgacagc
ccgtccagcccggcggccgcagcctccgcggcggacaagaaggtcatcgcaacaaaagtc
ctgggtacagtgaaatggttcaacgtcaggaatggatatggttttatcaatcggaatgat
acaaaggaggacgtttttgtacaccagacagccatcaagaagaacaacccgaggaaatac
cttcgcagtgttggcgatggagaaactgtggagtttgacgtagttgagggagagaaggga
gcagaggcggcaaatgtcactggcccaggaggcattgcagtccagggaagtaagtacgcc
gctgacaggaaccgctataggcgctatccccgaagaaggggccctcctcgcggtggagaa
tatccagataactaccagagtgacggagaaggggagccacccagcggaggtcgtgagaaa
ggaggcagccgagatgggggagagagcgccccagaaggagatgtgcagcaacagcagcgc
aggcccgcttatcctggcagacggcgctacccaccatactttggaggcgagggtgacgag
agccagggaggtcctgaccagggcaacaaaccagcgagggggacctactacagaggcttc
cgaccaaggggtccaccccgtcccagaccagtgcgggatggcgaggaggacaaggagaat
cagggtggtgaagatggtcagaaccaacagccccgccagcggcgctaccgccgtaacttc
aactaccgccgcagacgtccacagactggcggcaaacctggccaggaaaccaaggaggcc
aagacaggaggtgacccacctgcagagaaaacggccgctcccgaggcccagcagggtggg
gctgagtag
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integrated database retrieval system
