Anoplopoma fimbria (sablefish): 129099661
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Entry
129099661 CDS
T09102
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129099661 (ddx19a)
03015 mRNA surveillance pathway
129099661 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129099661 (ddx19a)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129099661 (ddx19a)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129099661 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129099661
NCBI-ProteinID:
XP_054464961
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All DBs
Position
12:17680385..17685501
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AA seq
487 aa
AA seq
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MSEDSWAVAVDVQEATTPSAQLDFSRKVDRVCVPRNIRGDINGNIGPEKIENEGLRKDGD
KVDLAEQSLLNKLIRRSLVRNRNQVEVLQRDPTSPLFSVKTFEELRLKPELLRGVYNLGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPENKWTQCLCISPTY
ELALQIGQVIEQMGKFCPEVKLAYGIRGNRMERGIKLQEQIVIGTPGTVLDWCTKYKLID
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLTKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVLCREKEDKFTSLCNLYGSLTIAQAMIFCHTRKMASWLASN
LINEGHQVALLSGEMTVEQRAAVIERFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGKADNETYLHRIGRTGRFGRRGFAVNMVDSKRSMDIINQIEMHFNRRITKLDTSNLE
EMESLIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagactcatgggcagttgctgtcgacgttcaagaagctacaactccatccgca
cagttggacttctcaagaaaagtggatcgagtgtgtgttcctcgtaacataagaggagac
ataaatggcaacattgggccggagaagattgaaaatgaaggtttgaggaaagatggggac
aaggtggacctggctgagcagtccctgttgaataagctgatccgccgctctctggtgagg
aacaggaaccaggtggaggtcctgcagagggaccccacatcccctctgttctcagtgaag
acttttgaggagttgagactaaaacctgaactgctgaggggcgtgtacaacctgggattc
aacagaccctcaaggatccaggagaatgctttgcccatgatgttggcacagccacctcag
aatctgatcgcccagtcacagtctggcacgggtaaaactgccgctttttctctggccatg
ctcagccacgtaaacccagaaaataagtggactcagtgcctttgcatctcgccaacatac
gagctagctctccagattggtcaagtaatcgagcaaatggggaaattttgccctgaagtg
aaactggcctacggcattcggggaaacagaatggagcgaggcatcaagttgcaggaacag
attgtcattggaacaccaggcacagtcctcgactggtgcaccaagtacaagcttattgac
cccaagaagattactatgtttgtgctcgacgaggctgatgtgatgatcgccacacaaggt
catcgggaccagagcatacggatccatagacagctgacaaaggactgccagatgctcctt
ttctctgcaacctttgaggactcggtgtggaggtttgcagagcaggtggttcctgatccc
aatatcatcaggctgaagcgcgaagaggagacgctggacaccatcaagcagttctatgtg
ctctgtagggagaaggaggacaagttcacatcactctgtaatctatatgggagccttacc
attgcacaggccatgatcttctgccatactcgcaagatggcttcttggctggcatcaaac
ctgatcaatgaggggcaccaggtggcattactgagtggagaaatgacagtggagcagaga
gctgccgtgatcgaacgctttaggaacggcaaggagaaagttctggtgaccacaaacgtg
tgctccagaggtattgatgtggaacaagtgtcgcttgtggtcaactttgacctccctgtg
gacatggatgggaaagcagacaatgagacgtacctccaccgcattggtcgcacgggacgc
ttcggcaggagaggatttgcggtcaacatggttgacagcaaacgcagcatggatataatc
aaccagattgagatgcatttcaaccggagaatcacgaaacttgacaccagtaatctggaa
gaaatggaaagcctgatcagctga
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