Anoplopoma fimbria (sablefish): 129099685
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Entry
129099685 CDS
T09102
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-1
KO
K06243
laminin, beta 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129099685 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129099685 (lamb2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ISP_coupler
jr-ZPR1
Motif
Other DBs
NCBI-GeneID:
129099685
NCBI-ProteinID:
XP_054464998
LinkDB
All DBs
Position
12:5516635..5568551
Genome browser
AA seq
1847 aa
AA seq
DB search
MRPPIKMPFMAVHLSLLMLALSAFGQELPSGPHGCTEGSCYPATGNLLIGRAINLTATST
CGLNGPEQYCIVSHLQESDKCFECNSQHHYHPDRHRNSHRIENVIYLMDNNGDTWWQSVN
GEENVSIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSSDFGRTWRPYRYFASNCTKTFPG
ISAKGLHHINDVICEERYSDIEPSTKGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRIN
FTKLNTLGDDLLDRRFDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVDARENGMIHG
RCVCKHNTEGLNCERCRHFHHDLPWRPAEAENPHTCRECNCNSHSNQCHFDMAVYLATGN
ISGGVCDDCEHNTMGRNCETCQPFYYQDPVRDIRDPRVCVACDCDPVGSMEGGVCDSHTD
LDMGMIAGQCRCKAHVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIMMGAPCDQIS
GDCSCKRYVTGRYCNKCLPEYWGLSNDLAGCRSCDCDFGGALNNRCVMENGQCDCRRHLI
GRQCSEVQPGYFCAPLDYYKYEAEDATGHSPGDSALPGKVRPQAETDCVQHLSNQLRRHR
RHRRTSNSQQHRAALRRIRQLQQTPDVRTVHRERSPNHMVTWTGPGFARVKDAAGLVLTI
DNIPYAMEYDIMIRYEPESTEDWEAIVSITSVQLPSSLRCGNLLPTEQLYTVTLPHRNRY
ILMPRPFCFEPSNRYVVSIRFQRHGVSHRHLTAFILVDSLVLIPKYTELPGFQGAEPEAE
QRREEMIRYMCLDSFMITPMPVLAEMCSKLICSISSIIHDGALSCQCDPQGSLRGECHKV
GGQCHCKPNVMGRHCDQCAPGTYGFGVNGCTACDCHSEGSSSHQCDPVSGQCQCRPGATG
RQCADCQPGQWGFPSCSPCQCNGHADICDPRTGECRDCRDYTAGHLCDRCVDGFFGNPVL
GSGEHCRPCPCPGNPGTDHFNGESCQADLTSNQIICNCKQGYTGPRCDQCAPGHYGNPEQ
PGGQCLPCKCNGNIDTQDSESCDPRTGQCLKCQYHTDGPSCAHCQHGYFGNALVHDCRRC
TCVTAGTVQSACSEGQCHCDRETGACTCRENVAGHNCDQCSPNHWNYGQDRGCEPCGCDS
QHADGSHCNMFTGHCHCHPGFGGKHCTECEQFHWGDPQVQCQECNCHPLGSEMAQCNQST
GACECREGAAGKHCDECARGFTGDFPKCVQCHPCFQLWDDAVCQIKRDLEHIQYTAQKIL
ESGATPVVGDTRIRELERKLKEVQDLISMEDRNKIHQLIGQIIDDLRAEIALTDGRLMAV
GQELNTTAVEEEALRRTLTVLERELRDINTTVANKTNLLDDYLTSGFGDQFDKVKKYYQE
SVKAEEKCNASMSGPLSPLEQSKKTRAVTEDLLDATKDNFLRALAAQNKSLNELQQKSHD
LDKKVHHLSHKVCGGHSNASVNGSCPDSQCGGAGCRDNQGNPVCGGQGCNGTVSASVGAL
NLAKNATDSLNAANEELQGVARKLQDIASLTQDVKNQAKNTLEKAQKKKEDFENNNKKLK
DFIKKIRDFLTEEGADPESIEKVALHVLAITLPVNRTTLDKMVKQIKDSLSSLTNVEGIV
NQTAQHISKAKELLDKAKEAKSRAEGVKDIANNTKQALDMSEKAIKKASTALKEAQDNLN
ITRNATVAVDERLTELEEKQKDVMMRLINLHREVEALRNKTEQNRLMAKDAKAQADNATQ
LASSLERSLNNTEEQYRDLQMKVDSLGGQAGGLNSIKQKAEDIKKEAVDLLGKASKGMEQ
LRKLEKKFKSNEQRMQKQRMELDELKENATLVRDQIREQVQKYSSCV
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaccaatcaagatgcccttcatggccgtgcatctgagcctcctcatgctggct
ctcagcgcatttgggcaggagctcccatcaggccctcacggctgcacggagggaagttgt
taccctgcgacaggaaaccttctgattggacgagccattaacctaaccgccacctctact
tgcggcttgaacgggccggagcagtactgcatcgtcagccaccttcaggagtcagacaag
tgcttcgagtgtaactcccagcatcactaccacccggaccgccacagaaacagccaccgc
atcgaaaacgtgatctacttaatggacaacaatggagacacctggtggcagtctgtaaac
ggagaggagaatgtcagcatcagactgaacctggaggctgaattccacttcactcatctc
atcatgaagttcaagacgttccgacctgcagccatgatcatcgagcgttcgtctgatttt
ggccgcacgtggcgcccctaccgctactttgcctcaaactgcaccaagacctttcctggc
atctcagccaaaggactgcaccacatcaacgacgtcatctgtgaggagcgctactccgac
atcgaaccctcaactaaaggagaggtcatttacaaggttttggatcctgccattcatgtg
aaagacccctacagcttggacattcaagaacttctgcgcatcaccaacctgcgcatcaac
ttcaccaagcttaacactctgggagacgacctgctggaccgacgctttgacgtgctgcag
aaatactactacgccatctatgagctggtggtgagagggagctgcttctgttacggacac
gcctcagagtgcgccccggtaccgggggtggacgcccgggagaatggcatgatccacggt
cgctgtgtatgcaaacataatacagagggcctaaactgcgagcgctgccgacatttccac
cacgacctgccatggagaccagccgaagcagagaacccacacacctgcagagagtgcaac
tgcaacagccactcgaaccagtgccactttgacatggcggtgtatttggccacgggtaac
atcagcggaggagtgtgtgacgactgtgagcacaacaccatgggacgcaactgtgagacg
tgccagcccttctactaccaagaccccgttagggatataagggaccctcgagtctgtgtt
gcctgtgactgtgacccagtcggatcgatggagggaggagtgtgtgacagtcacaccgac
ctggacatggggatgatcgcgggccagtgtcgctgcaaagctcacgtcaaaggcacccgc
tgcgacgactgcaaggagggttactacggactcagccagaacgacccgctgggctgtcag
ccttgcaactgtgaccctcgcggcatcatcatgatgggggctccttgcgaccagatcagc
ggggactgctcctgtaaaagatacgtcactggtcgttactgtaacaagtgtctgcctgag
tactgggggctgagtaacgacctggccggctgcagatcatgtgactgtgactttggtgga
gccttgaacaacaggtgtgtgatggagaacggccagtgtgactgcaggaggcatctgatt
ggccgacagtgttcagaggttcagcccggttatttctgcgctccgctcgactactacaaa
tacgaggctgaggacgccactggacactcccccggtgactctgctctgccgggcaaagtt
cgtcctcaggcagagactgactgtgttcagcacctcagcaaccagttgaggaggcaccgc
cgtcaccgtcgcacctccaactcacagcaacatcgggcagcactgagacgcatccgccag
cttcaacagacaccggatgtgaggaccgttcacagagagcgctctcccaaccacatggtg
acgtggacaggacccggatttgcccgtgtcaaagacgccgccggcctggttctgactatc
gacaacatcccctacgccatggagtacgacatcatgatccgctacgaacctgagtccaca
gaggactgggaggctatagtgagtattacatctgtacagctgccgtccagtctccggtgt
ggaaacctcctaccaactgaacagctctacacagtgactctgcctcatcggaacagatac
atcctgatgcccaggccattctgtttcgagcccagtaatcgttacgtggtctcaatcagg
ttccagcgccatggcgtctcacacagacacctcactgccttcattctcgttgactcgctg
gttctgatccccaaatacactgagcttcctggtttccaaggtgccgaaccagaggcagag
cagcgtcgggaggagatgattcgatacatgtgtctggattccttcatgataacaccgatg
cccgtcctagcagagatgtgctccaaactcatctgtagcatttcatccatcattcatgat
ggcgctctgtcctgtcagtgtgaccctcagggctcgctcagaggtgagtgccataaggtg
ggaggtcagtgtcattgtaaacccaacgtgatgggtcggcattgtgaccagtgtgccccg
ggaacctacggcttcggagtgaacggctgcactgcctgtgactgccactcagagggctca
tcgagccaccagtgtgacccagtttcaggccagtgccagtgcaggccgggagccactggg
cgtcagtgcgcagactgccaaccaggccagtggggcttccccagctgcagcccctgccag
tgtaacggccacgcagacatctgtgacccccgcaccggggagtgccgagactgcagggac
tacacagcaggacacctctgtgaccgctgtgttgatgggttctttggaaacccggtgctt
ggttcaggggagcactgtcgaccctgcccctgtcccggtaaccctggcacagaccacttt
aacggggaatcctgtcaagctgacctcacctccaaccagatcatctgcaactgcaaacaa
ggctacactgggccccgctgtgaccagtgtgcccctggtcactatggcaacccagagcaa
cccggcgggcagtgcctcccctgcaagtgcaacggaaacatcgacacccaggactctgag
tcatgtgaccccaggaccggccaatgcctcaagtgccagtaccacaccgacggaccgtcc
tgtgctcactgtcaacacggttactttggcaacgctttggtccacgactgcagacgctgc
acctgtgtgactgccggcaccgtccagtccgcttgcagtgaaggacaatgtcactgtgac
cgggagactggagcctgcacttgcagggagaacgtggccggacataactgtgaccagtgt
tctcccaaccactggaactacggtcaggaccgaggctgtgagccctgcggctgtgactcg
caacacgccgatgggagtcactgcaacatgttcactggacattgccactgtcatccaggc
ttcggaggtaaacactgcactgagtgtgagcagttccactggggagacccgcaggtgcag
tgtcaagagtgtaactgtcatccgctgggctcggagatggcccagtgcaaccagtcaacg
ggggcgtgcgagtgcagggagggcgcggcggggaagcactgcgacgaatgcgctcgcggt
ttcactggcgacttccccaagtgtgtccagtgtcacccttgcttccagctgtgggacgat
gcggtgtgccagatcaaacgggacctggaacacatccagtacaccgcacagaagatcctg
gagagcggggccacgccggtagtcggggacacgcgcatcagagagctggagaggaagctg
aaggaagtgcaagatctgatcagcatggaggacagaaacaagatccaccagctgatcgga
cagatcatcgatgacctcagggctgagatcgccctgaccgacgggcgtctgatggccgtc
ggccaagagctaaatacaaccgcagtagaagaagaggcactgagacgcactctgactgtc
ctagagagagagctgagggacatcaacacaactgtggctaacaaaacaaacctgctggat
gactacctcacctcaggatttggagatcagtttgataaagtgaagaaatactatcaggag
tcagtgaaggccgaggagaaatgcaacgcttcaatgtccggtcccctcagtcctttggaa
cagtccaaaaagacccgcgctgtcactgaggacctgctggacgccactaaagataacttc
ctccgtgctctggctgctcagaacaaatcattaaacgagctgcaacagaaatcccacgac
ctggacaagaaggtccatcacctcagccataaggtatgtggtgggcacagcaatgccagt
gtcaacggcagttgcccagacagccaatgcggcggcgccggttgccgtgacaaccagggc
aatcctgtgtgtggagggcagggatgcaacgggacagtgagcgcttccgtcggagcgctg
aatctcgcaaagaacgccaccgacagtctgaacgctgccaacgaggagctgcagggcgtg
gccagaaagctccaggacatagcctctctgacacaggatgtgaagaaccaggcgaagaac
acgctggagaaagcgcagaagaagaaggaggactttgaaaacaacaacaagaagctcaaa
gatttcatcaagaagatcagagacttcctcaccgaggagggagcagatccagagagcata
gagaaggtggctctgcatgtgttggcgatcaccctgccggtcaacaggaccactctggac
aaaatggtcaagcagataaaagacagcctttccagcctcaccaacgtcgaggggatcgtc
aaccaaaccgcacagcacatcagcaaagccaaggagctcctcgacaaagctaaagaagcc
aagagccgagcagagggtgtgaaagacatagccaataataccaagcaggcgctggacatg
tctgagaaggccataaagaaagcaagtacagccctgaaggaggcccaagacaacctgaac
atcaccaggaatgctacagtcgcggtggatgagaggctgacggagctggaggaaaagcag
aaggatgtcatgatgcgtttaatcaacctccacagggaggtggaagctctgaggaacaag
acggagcagaacagactgatggcaaaggacgccaaagcgcaggctgacaacgccacacaa
ctagcatcctcactggagcggagcctcaacaacacagaggaacagtaccgggatctgcag
atgaaggtggactctcttggcgggcaggctggaggtctgaacagcatcaagcagaaagca
gaggacatcaagaaggaggcagtagacctcctcggcaaagccagcaaagggatggagcaa
ctcaggaaattggagaaaaagttcaagagtaacgagcagcggatgcagaagcagcgcatg
gagctggacgagctgaaggaaaacgccactctggtgcgggatcagatccgggaacaagtg
cagaagtacagcagctgcgtgtga
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integrated database retrieval system