Anoplopoma fimbria (sablefish): 129099691
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Entry
129099691 CDS
T09102
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129099691 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129099691 (nr1h5)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129099691 (nr1h5)
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
129099691 (nr1h5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PUA_2
Motif
Other DBs
NCBI-GeneID:
129099691
NCBI-ProteinID:
XP_054465005
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All DBs
Position
12:3102626..3113737
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AA seq
493 aa
AA seq
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MREWTELEMSFSAGGFLSASDGYCSAEQLQYYDMLADPLGYPLHDPDLQLLPCSQQQYSP
ANLPFSLYGSPPSATSSPSSSSSSSQPCHPSYHYSPHYLEAPCDPSLEPHCGVLAQGLGV
VGLPLGRRTRVVSGGKSRGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYHC
KSGGGCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGGKVRGVKEEENT
DSRRVSSTSRLPGQALSASLTREQKYIMDRMVEAHQLYKTQDSNHCRLLEWPCTEEEEGL
SYSASPQLQRLLQFARTVPGFDLLDFSDQSSLLSVSSLEVMFLLSAQQFSHNPTSPSPAL
QIFSMSSHNWLRNVESKENIHSRSLVNSGGSEDLLGPVLNFFHSMATLRVTEAEYTLLTA
TALLCSDRASLQAASCVEKMQELILDLLSRVCGAQAGAARGGPQRFGRLLGRLTELRTLR
HNYLLLTGRQPGH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggactgagttggagatgagcttttcggccggggggtttctctctgcctcg
gatggttactgctcagcagagcagctccagtattacgacatgctggctgaccctctgggc
taccccctacatgaccctgaccttcagctgctcccttgcagccaacaacaatacagccct
gccaacctgcccttctccctctatggctctccgccctccgccacctcctctccatcctcc
tcctcttcctcttcgcagccctgccatccttcgtatcactacagccctcattacctggag
gccccctgtgatcccagccttgagccccactgcggggtcctggctcaggggctcggagtg
gtaggattgcctctggggcggaggacacgggtggtgtcgggaggaaagagcagaggtcag
gaagagctgtgtgtggtgtgtggagacaaagcgtcagggtatcactacaacgctcttacc
tgcgagggatgcaaaggtttctttcggcgtagtgtgactaaaaaggctgtgtatcactgt
aagagtggcggtggctgtgagatggacatgtacatgaggaggaagtgccaagactgtcgg
ctgaggaagtgccgtgctgtgggaatgctggctgagtgccttctgacagaggtgcagtgc
cagtcaaaacgactgaggaaaggcggtaaagtcagaggtgttaaggaagaggagaacaca
gacagcaggagggtcagctctaccagtcggctacccgggcaggctttgtctgccagttta
acccgagaacagaagtacattatggacagaatggtggaggcccatcaactatacaaaaca
caggacagcaaccactgcaggttgctcgagtggccgtgtacagaggaagaggagggcttg
tcttattctgcatcaccccaactgcaacgactgctacagtttgccaggacagtgccaggt
tttgacctcctggatttttctgaccagagctctcttttgagcgtctcttcgctggaggtc
atgttccttctctcagcacagcagttctcccacaacccaacaagcccaagtccagccctg
cagattttcagtatgtcatcacacaactggttgagaaatgtagagtcaaaggaaaacatc
cacagtaggtcgcttgtcaattcaggaggcagtgaggatctcctcgggccggtgctcaac
ttcttccatagcatggcaacgctgcgagtgacagaggcagaatacaccctgctcactgca
acagctctgctctgctcagaccgtgcatccctgcaggcagccagctgcgttgagaaaatg
caggaactgatcctggacctgctgtctagggtttgtggggcccaggctggagctgcacga
gggggaccccagcggttcggccgcctgctggggagactgacagagctacggacccttcgt
cacaactacctcctcctgacaggacggcagcctggacactga
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