Anoplopoma fimbria (sablefish): 129099697
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Entry
129099697 CDS
T09102
Symbol
lima1a
Name
(RefSeq) LIM domain and actin-binding protein 1a
KO
K23026
LIM domain and actin-binding protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129099697 (lima1a)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
129099697 (lima1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
129099697
NCBI-ProteinID:
XP_054465013
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All DBs
Position
12:16435507..16456801
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AA seq
729 aa
AA seq
DB search
MASAAPFSRRQWASQSLRVTAKEMSIVSTRGKNNAIAERFSKYQLAAEEGNAEKRKAVAE
PLPSTLRSGNLSVLKKRWEQPQQKQQLSSSHRPQPQACIPVDHQRHISQPTGPKPAPTSQ
IENQPDTYKTTTRSQDQDTELETLLHSETSTSQLHSTQHEGPTNMEKPSRDSEMQEGATA
AEVPDCEKPSVPLNSLKMMFEKGENLTDKVSKEQTSRGNSGDTANMDQLLGDGTLADSTP
LRDRMALYQAAISKQEVPPTSVNNDQLDGFCGKQKENVPPCTLDLSPEPEHNSRKVYTSE
SNGSAAGTPSSSSQRDSSQPKTPKNFCLPVRETCVSCLKTVYPLERLVANQHVYHSSCFR
CSHCNTKLSLANYASLHNNVYCKPHFCQLFKAKGNYDEGFGHRPHKELWESKGESGETSP
QSNTQTKIQSPAPVPAPDLDSPSVEDSPLAKVNVLMATMEALGQGSSEKSDRPSETRRLK
ISWPPRTEPQDTTDRSETTTTVEEGTPGKPIRAKWPPEEDSLSSPQEQTRETPCLRRTSS
LKERSMPFSLAGKAPAPEARKPSPPPPVDDGELSPEPSSMELQHAGRSTDSQTPTEDSCV
DLHTSSGEEEQEQEQEAEMNTENMQEHHLTKEEDDTPDEQPEEEEEEEDEERMEEEEDEE
AVLEEEMPPLKQEETPTDISSPEGEVEASRSSKDVGFWDGEEVEQQALTVEDMIKRNRYY
EDEEEEEDV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgctccattcagccgcagacagtgggcgtcccagtcactgagggtcacc
gccaaggagatgtccatcgtctctacccgagggaaaaacaacgccattgcagaacgcttc
tccaagtaccagctggcagcagaggagggaaatgcagagaagaggaaagcggttgcagaa
cctcttccctccacactgcgcagcgggaatctgagtgttttaaagaaacgctgggaacaa
ccacaacaaaaacagcagctgtcctccagccacagaccccaacctcaagcctgcatccct
gttgaccatcagcgccacatcagccaaccaacaggccccaaacctgcacccacatcacag
attgagaaccagccagatacctacaaaaccaccacacgctcacaggaccaggatactgag
ctggagacgctgcttcactctgagaccagcaccagccagctgcattctactcaacacgag
ggtccgaccaacatggagaagcccagcagagattcagagatgcaggagggagcaacggca
gctgaagtgccggactgtgagaagcccagtgtccccctcaacagcctcaagatgatgttt
gagaagggagagaacctgactgacaaggtttccaaagagcaaacaagcagaggaaacagc
ggtgatactgccaacatggaccagctactaggagatggaactctcgcagactcgactcct
ctccgggacaggatggccctctaccaagctgccatctccaaacaggaagtccctcccacc
tcagtgaataatgatcagctggacggtttctgtgggaagcagaaggagaacgttcctccg
tgcactcttgacctgagtccagagcctgaacataacagcaggaaagtttatacctcggag
agcaacggctctgctgctggtactccttcatcctccagtcagagagactcctcccagccc
aagactcccaaaaacttctgtctgcctgtgagggagacctgtgtgtcgtgtctgaagacg
gtgtatcctctggagaggctggtggccaatcagcacgtttaccacagctcttgcttccgc
tgctcacactgcaacaccaaactgagtttggcgaactacgcctccctgcacaacaacgtc
tactgcaagccgcacttctgccagctcttcaaggccaaaggcaactacgacgagggcttc
ggccaccggccccacaaagagctgtgggagagcaaaggggagagcggggagacctcccca
cagtccaacacccagaccaagatccagagcccggccccggtcccggccccagacctggac
agccccagtgtggaggattccccgctggctaaagtcaacgtgctgatggccactatggag
gctctgggacagggatcatcagagaagtccgacagacccagtgagacccgcaggctgaaa
atctcctggccgccacggacagagccccaagacacgaccgaccgcagtgaaaccacaaca
accgtggaggaggggaccccaggtaagcccatccgagccaagtggcccccagaggaggac
tccctctcctcaccccaagagcagaccagagagacaccctgcctgcgccggacctcctcc
ctgaaggagcgcagcatgcccttctcactggcaggaaaagctcctgctcccgaggccagg
aaaccgagtccgccacctcctgtggacgacggggagctcagtcctgaaccctccagcatg
gagctgcagcacgctgggcgctccacagacagccagactcccactgaggacagctgcgtg
gacctccacaccagctcaggagaggaggagcaagagcaagagcaggaggcggagatgaac
actgaaaacatgcaggaacatcatctcaccaaagaggaagacgacaccccggatgaacaa
cctgaggaggaggaggaggaggaggacgaggagaggatggaggaggaagaagacgaagaa
gctgtgttggaagaagagatgccgcctctgaaacaggaggagacaccgacagacatctct
tctcctgaaggtgaggtggaggccagccggtcgtctaaggatgtggggttctgggatggc
gaggaggtggagcagcaggcgctgacggtggaggatatgatcaaacgaaaccgatactac
gaggatgaagaggaggaagaggatgtatag
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