Anoplopoma fimbria (sablefish): 129099718
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Entry
129099718 CDS
T09102
Symbol
cntn3a.2
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129099718 (cntn3a.2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
129099718 (cntn3a.2)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Contactins
129099718 (cntn3a.2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
Others
129099718 (cntn3a.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
V-set_CD47
Ig_4
C2-set_3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
129099718
NCBI-ProteinID:
XP_054465041
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Position
12:10656419..10681851
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AA seq
1026 aa
AA seq
DB search
MTLPWKQLLLLSIIDCLADCLDSGSYHGPRWRMEPGDLFIPIDSIEEEATLTCDAKGTPP
PQYRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMAFNTVGAILSRRASLQ
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLTYAWVFNEYPYFVQQDNRRFVSQQ
TGNLYIAKVEPSDVGNYTCVVMNSITKGKVQSSPTSLILRTDGVMGEYEPKIEVNFPDNV
PAAKGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYEC
VAENKMGKNIATGRLAFYAKPQWMQAMKDTALAIEERLYWECRANGRPKPSYTWLKNGQQ
LLSEERIHVEDGVMSVSVLTLSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRA
LLKAKAGTTVTLECKPQAYPIASILWKKGNLPIHTSDRITLSPDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRITQGPVDMEIIVGESIVLPCQVASDPVLDVSFSWAF
NGQLIAKGDGHFELVGGVTAGDLMIRNIQLYHAGKYICVVDTDVESLSAVAVLIVKGPPS
PPDSVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPELIDGNTLT
ATVVDLNAWVEYEFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAAPGDVGGGGGSRAELVI
TWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPGASRYVYRNESIAPFSPFHVKVG
TYNSKGQGPFSPVITIYSAETEPSGMPAGVWARSVSASEIEVNWQALSFSPERVLGYEVV
YWEDDTKPETMGKVRVPWNQTSVTVSGLEGNTQYFLTVSAFNTAGTGPFLPAINVTTKKP
PPAQPPLNVEWSLIGSQLTLYWEPVVATESESEVTGYQLSYRRQRHKEVNTLTTANWTAE
LTLPEEDDDYIIHIQTLSEGGLGPASDPIRIHQLSMSARGSRAWSVYISPLSLLIAIAIS
TFRSTS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgccatggaaacagcttctactgctatcaatcatcgactgtctggcagattgt
ctggacagtggatcataccatggtccaagatggaggatggagcccggtgacttgttcatt
cctatcgactccatagaagaagaagctactctgacgtgtgacgcaaagggaacgccacct
cctcagtacagatggtcattgaatgggactctcataaatctgggcctggatcgccggcgg
cgtctgtctgggggcaacctcattataagcagtctggaccgctaccaggacgtaggaatg
taccagtgtatggcgttcaacactgtaggagcgatcctcagcaggagagccagtctgcag
tttgcctacttagatcatttcaaagtccacaccagaagcgcagtgtcagtccgcgaggga
caaggagtggtgcttctttgtggaacgcccacttcctcaggagaccttacttatgcctgg
gtcttcaacgagtacccgtactttgttcaacaagacaatcggcgtttcgtctcccagcag
acgggaaacctttacattgccaaggtggagccctccgatgtgggcaactacacttgtgtc
gtgatgaacagcatcacaaaggggaaagttcagagctcacccacgtctctgatcctcagg
acagatggagtgatgggcgaatacgagccgaaaatagaagttaatttcccagacaatgta
cccgccgccaaaggatcaacagttacgctggagtgtttcgccctcgggaaccccgtccca
gaaatcacctggaagagggctaatggcgttcccttccccagtaaagtgaaaatgaagtac
tccaatgcagtgctggagatccccagcttccagcaggatgatacaggaggatacgagtgt
gtggctgagaacaagatgggcaagaacatagccaccggtcgactggcattctatgccaag
cctcagtggatgcaggccatgaaggacacagccctggccatagaggagagactatactgg
gaatgccgagccaatggcaggcccaaaccctcctacacatggctgaagaacggccaacag
ctactctcagaggaaagaatccatgtggaggacggagtcatgtcagtgtcggtgctgaca
ctatccgacgccggcatgtaccagtgtgtggcggagaataaacacggcgtcatatatttc
gctgctgaactaatggttttagcctctcctccagacttcacagggaacgtcctcagagct
ttgctcaaagccaaggcaggcactacagtgactttagagtgtaaaccccaggcctatccc
atcgccagcattctatggaagaaaggaaacctgcccatccacaccagtgacaggatcaca
ctttccccagatggaacattgaggcttgccaatgtgagcaagtctgatgcaggcagctat
acgtgcttcgctaggaatagatttggcatgtcgagtacaactggaaggctccttgttacg
gatccaaccagaatcacccaggggccagtggacatggagatcattgtgggcgagagcatt
gtgctaccctgtcaggtcgccagtgaccccgtccttgacgtttctttctcctgggccttc
aatggacaactcatcgccaagggagacggtcactttgagctagtgggcggggtgacagca
ggagatctgatgatcaggaacattcagctttaccatgcaggcaaatatatctgtgttgtg
gacaccgacgtggagagcctgtcagccgtggctgtattgattgtcaaaggcccccccagt
cctccagactctgtgacggtggaggaggtgacagacagtacagcccagctggcctggagt
cccggcagagacaacggcagccccatcaccaattacctcatccagactaggactcccttc
accgtgggctggcagagggttaatacagtcccagagctaatcgatgggaacacactgaca
gccactgtggtggacctcaatgcctgggtggagtatgagtttcgggttttggccaaaaac
agtgttggggttggggaacccagccctgtgtcggtcaagaccaggacagaggacgcagtt
cctgatgcagcaccaggtgacgtgggcggaggaggtggaagcagagcggaactggtcatc
acatgggagcctgtccccgaagaactacagaatggcgagagctttggttacatcattgct
ttccgcgcctttggagaagttagctggactcacgtggccacctctgcccccggtgcgtcg
cgttacgtgtaccgcaacgaaagcatcgcgcccttctctccatttcatgtcaaggttggc
acttacaacagcaaaggacagggtcccttcagccccgtgatcaccatctactctgcagag
actgagccaagcgggatgccagcgggagtttgggccagaagtgtctcagcctctgagatt
gaggtgaattggcaggctctctccttctctcctgaaagggttctgggctatgaggtggta
tactgggaagacgacactaaaccagagaccatggggaaggttagggtgccttggaaccaa
acctctgtcacagtcagcggcttggaagggaacacgcagtatttcctaacagtcagcgca
ttcaacacagcgggcaccggccctttcctccccgcaatcaatgtcaccaccaaaaagcca
ccaccagcccaaccgccgctgaatgtcgaatggtccctaattggctctcagctgactctt
tactgggaacctgtggtggcaacggagtcggagtcagaagttacgggctaccaactgtcg
tacaggagacagaggcacaaagaggtaaacacactcacaacagccaattggacggcagag
ctgacgctccctgaggaagatgacgactacatcatccacatccagacgctgagtgaggga
gggctgggcccggcctccgatcccatacggatccaccaactaagtatgagtgcccgcggc
tccagagcttggagtgtgtacatctcccccctctcactgctcatcgccatcgcaatatca
acattcaggtcaacgtcgtga
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