Anoplopoma fimbria (sablefish): 129099801
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Entry
129099801 CDS
T09102
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like
KO
K06842
semaphorin 6
Organism
afb
Anoplopoma fimbria (sablefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
129099801
NCBI-ProteinID:
XP_054465157
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Position
2:complement(9084622..9102507)
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AA seq
1113 aa
AA seq
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MGQRAVLLLSELLLLLLTASRTLLAVSFPEDSVPLDVVDAHFARRYPVFRGRPSGNESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQSDRDMCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFD
VLQSITDIIDINGVPSVVGVFTTQLNSIPGSAVCAFSMADIEKVFLGRFKEQKTPDSVWT
PFPEEKLPKPRPGCCSGHGPAASLKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKT
RVRYRLTALAVDNEAGPHKNYTVVFIGAESGVVLKVLAKTSTVSLNDSVLLEEIDVFNRA
KCLSNHEDDKRVLSLHVDKEAHSLYVAFSSCVIRIPLSRCERHSSCHKSCIASRDPYCGW
TPLGACERIQPGVLTGYEQDVELGNTAHLGDCHAFLGTTSAPDYKSFGDPTSDMEFSSPP
VTVHPSGPILPPVLIPTQSPSSGPGPELYGSGFVLQDDPATSHSLDSIPGGQEGVWDIQA
GETNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRHVHKDAESAPSCSDSTG
SFVKLNGLFDSPVKEYQTDIDSPKLYTNLLSNGKDLNSPNGDTKTMILRDGCQPPELAAL
PTPESTPVLQQKSLQPIKNQWERAHAKASGPRKESNSSAKSPQFLLSSSGAPPNSNSNSN
HPNLALGHSHIPSAVVLPNATHDHSNLDNGDDTLPHSSERKPRNPDSKGSRKDQKRSVDA
RNTLNDLLKHLNDSVANPKAILQEGSGPRPRPQLTLEPMEELTELPPRVPSREASLYSPS
SSLPRHSPTKRVDVPLPSTPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSPNGVT
MGVSVSRQHSMNRGGYMPPTPPSRLDSQGGVMGAAMHSAHPSSVSRQGSYSGYGSLPRTG
LKRTPSLKPDVPPKPNGFSPQTPQMRVVNKYSY
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgtgcttctgctcagtgagctgctgctgctgctgctgacagcctca
cgcactctcctcgcagtcagcttccccgaggacagcgtgcccctcgacgtcgttgacgca
cactttgcacggaggtacccagtgttcagaggcaggccctctggaaacgagtcgcagcat
cgccttgactttcagctgatgaccaagatacaggacactctgttcatcgctggcagagat
caggtgtacctggtcagtctgagagaatcctacaggaatgagatcattccatacaggaag
ctaacatggcgatcgggccaatctgacagagacatgtgtgccgtcaagggaaaacacaga
gacgagtgccacaacttcatcaaagtgctggttcccagaaacgacgacctggtgttcatc
tgcggtaccaacggcttcaaccccatgtgcagatactacaggctggataacctcgagttt
gacggggaggagatcaatggactggcacgatgcccgtttgactccaagcaaaccaacgtt
gcccttttcgctgaggggaagctgtattcggcaactgtagctgacttccaggccagtgat
tctgtcatctatcgcagtatgggtgacggatcagccctgaggaccatcaaatacgactcc
aaatggctgaaagaacctcatttcctgcacgctgcagagtatgggaattatgtgtacttc
ttctaccgggagattgcagtggagcacagcaatctgggcaaggttgtgtattctcgcgtg
gcccggatctgtaagaacgacgtcggcgggtcacagcgggtgctggagaagcactggacg
tcttttgtgaaggcgaggctgaactgctcggtgcctggggagtccttcttctacttcgac
gtgcttcagtccatcactgacatcatcgacatcaacggagtaccgtcggtggtcggtgtg
ttcaccacacagttgaacagtatcccagggtcggcagtgtgtgccttctccatggccgac
atagagaaagtattcttgggacggttcaaagaacagaagactcctgactctgtgtggact
ccatttccagaggagaagctgcccaaacctcgacccgggtgctgttcaggtcatggtcca
gctgcgtccttaaagagctccatcgagttcccggacgacaccctgcagttcatcaagtcc
caccccctcatggacacagctgtgccttctatcggggatgagccttggttcaccaagact
cgcgtcaggtacagactgacagcgctggctgtggacaacgaagcaggacctcacaagaac
tacacagtggtgttcatcggggccgagtcgggggttgtcctcaaggttttggccaagacc
tccactgtgtccctgaatgacagcgtgcttctggaggagatagacgtctttaacagggca
aagtgcctgtctaaccacgaggatgacaagcgtgttctctcgctgcacgtggacaaagag
gcgcacagcctgtatgtcgccttttcaagctgtgtcatccgtattcccctgagtcgctgt
gaaaggcattcttcctgccacaagtcctgcattgcatcaagagatccctactgtggctgg
acgccccttggggcctgtgagaggatacagcctggtgttttgactggatatgagcaagac
gtcgaattgggaaacaccgcccacctgggagactgccatgcgtttttgggcactacatca
gcgccagattacaaatcatttggcgaccctacctctgacatggagttttcatcaccgcca
gtcacagtccaccccagtgggcccatactccccccagtactcatacccactcagagcccc
agctctgggcctggtccagagctctacggctcaggctttgtgctgcaggatgacccagcc
acctcccattctttagactctatcccagggggccaagagggtgtttgggatatccaagca
ggtgagaccaaccagatggtccacatgaacatcctcatcacctgcgtgtttgctgctttt
ctcatgggggccctcttggctggtctgattgttttctgctaccgagactcattcctccgt
aagccacgacacgtccacaaggatgcagagtctgctccgtcctgctccgactccactgga
agcttcgtcaagctcaatggcctctttgacagccctgtaaaggagtaccagaccgacatt
gattctcccaagctgtacaccaatctgctcagcaacggcaaagacctgaattcacccaac
ggagacaccaagaccatgatcttgcgggacggctgtcagccccctgagctggctgccctg
cctacacccgagtccacccctgtgcttcagcagaaaagcctgcagcccatcaaaaaccag
tgggagagggctcacgcaaaggccagtggacctcgtaaggagtccaactcatcagccaag
agtcctcagttccttctttcttcttctggtgctcctcccaactccaactccaactccaac
caccctaacctcgccttgggacactcccacatccctagtgcggttgtcctgccgaacgcc
acacatgaccactctaaccttgacaatggagatgatacattgccgcattcgtccgaaagg
aagccgaggaacccggattctaagggaagtaggaaagaccagaaaaggtctgtggatgcc
agaaataccctaaatgaccttttaaaacaccttaatgactcagtggccaaccccaaggcc
attcttcaagagggatcggggcctcgcccaaggccacagctcactctggagcccatggag
gaactgactgaattaccccccagggtgcccagccgtgaggcttccttgtactccccgtcc
tcctccctgccgaggcacagccccaccaagagggttgatgtacccctgcccagcactccg
acaacgccaacgggcagcctgagcatggggggcaccctggagaggcaaagaggggggtat
caactccaccggagtgcctctcacaggcagtccttatccacctccccaaatggggtaacc
atgggggtgtctgtgtctcgccaacacagtatgaacagagggggttacatgcccccaaca
ccgccctccagacttgactcccaaggcggagtgatgggggcggcaatgcactcagcccac
ccatcctctgtttcccgacagggcagctacagcgggtacggctcactccctcgcacaggg
cttaaacggaccccatcgctaaagccagatgtgccccctaaacccaatgggttttcacca
cagactccacagatgcgggtggtcaacaagtacagttattaa
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