Anoplopoma fimbria (sablefish): 129099807
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Entry
129099807 CDS
T09102
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129099807
Spliceosome [BR:
afb03041
]
Common components
Common spliceosomal components
General mRNP proteins
129099807
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_8
RRM_7
Motif
Other DBs
NCBI-GeneID:
129099807
NCBI-ProteinID:
XP_054465165
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All DBs
Position
12:23671123..23679129
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AA seq
513 aa
AA seq
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MADDFDVEAMLEAPFRKDEIKSSHANGHDEQSKKKRRSRSKSRSPSSRKRRSRSKDKKKS
KKRSKSRERKRSRSRERHRSGSRSKERSGRYRARKSPVRKRSKSRSPFKKEKSPIRNFED
AIGPFNKIREQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRN
SRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQVDAEKNRAAAAANNLQKGSS
GPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKA
LEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGT
GLKIPPAAQQALQMTGSIPFGNISAPQVQTPTPSQALNLPSQPLATHCLQLSNLFNPQSE
NDPTWAVEIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFA
GKMITAAYVPLPTYHNLFPDSVTAKQLLMPARR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccattcagaaaggatgagatc
aagtcctctcatgcaaatggacatgatgagcaaagcaagaaaaaaaggaggagccgcagc
aagagccgaagcccaagctctaggaagagaagaagtcgaagcaaagacaaaaagaagagt
aagaagaggagcaagagccgagaaagaaaacgaagccgcagcagagagcgccatcgcagc
ggctccaggagcaaggagcgctccgggcgttacagagcacgcaagagcccagtccggaaa
cgttcaaaaagtaggagccctttcaaaaaagagaagagtcccatcagaaactttgaagat
gctatcgggccgtttaacaaaatcagggagcaaccaattgacaacctaactccagaggag
agagatgctcgcacagttttctgcatgcagctcgctgccagaatcagagctcgagacctg
gaagatttcttctccgctgtcggaaaagtgagagatgtgagaatgatctcagacagaaac
tccaggagatcaaagggcatcgcatacatcgagtttgtggagtcttcttctgtaccgctg
gctattgggttgaccggccagaggcttctaggagtgcccatcatcgtccaggcctcccag
gtggatgcagagaaaaacagagctgcagccgctgccaacaacctacagaagggcagttca
ggccccatgaggctgtacgtgggctcgctgcacttcaacatcaccgaagaaatgcttcga
gggatctttgagcccttcggaaagatcgagggaatccagcttatgatggacagcgagact
ggacgatccaaaggatatggcttcatatcgtttgcagacgcagaatgcgctaaaaaggcc
ttggagcagctgaacggcttcgagctggccggccgtccgatgaaggtggggcatgttaca
gagcgctccgactcatcgacggccagctcgttcctggacaacgacgaactggagaggact
ggcatcgacctcggcaccacggggcgtctgcagcttatggctcgactagcagaaggaacc
ggcctgaagatccctcctgcagctcagcaggctctacagatgaccgggtccattcccttt
ggaaacatctctgctccacaagttcaaactccaactccaagccaagcattgaacctccca
tcacagccgctggccacacactgcctccagctgtccaacctgttcaacccacaatcggaa
aacgatcccacctgggccgtcgagatccaagacgatgttatcgaggagtgcaacaaacat
ggaggaatcgttcacatttatgttgataagaactctgctcaaggtaatgtgtacgtgaaa
tgtccctcaataccagcagcgatggcgactgtaaatgcactacatggacgctggtttgca
ggcaaaatgataaccgccgcctacgtccccttaccgacctaccacaaccttttccccgat
tcagtaacggcgaagcagcttctaatgccggcacgccgatag
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