Anoplopoma fimbria (sablefish): 129099854
Help
Entry
129099854 CDS
T09102
Symbol
pou6f1
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129099854 (pou6f1)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129099854 (pou6f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Collagen
LRR_EndoS
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129099854
NCBI-ProteinID:
XP_054465240
LinkDB
All DBs
Position
12:16775553..16786598
Genome browser
AA seq
657 aa
AA seq
DB search
MNSQDPPAKDAPLTVNEQVIVMSSHETIRVLEVEVDASLPSSVPDGKGEVKAEEGVARPA
DQPEADSIQDGPTMPQSTGGGVLGEQQVVSVEVATPAVQTLTPAVPVSLSLSQPQATMPI
TVGCPQVLTQESLATLMTSMMAQTGSLGQPLLIPISMAGSIGGQGGLAVLTLPTTNVASL
PGLTAANTAGNLLKLPFAGLQAATVLNSVQPQAQTMFQPQAAIQPVQVTSHPTQVTNAQV
TAAQVAAAQAATTVSQSNISLAALQTAGLSINPAIINAASLVTQPQFLSSLSSTPIFTSA
MSNMAGITSQIITNAQGQVIGTLPLLLNPASLAGGAGTSTLQGLQGLQGFQGLQGLQGLQ
GLQGLQGLQSLQGLQGLQGLQGLQGLQGLQGLQFQTVTPQLLLNNQGQIIATVGNGSAVT
TSAAVLPKAAAPPTLTKPITQASVTTVSQSPIVIAPQPSVLKTASMLSSTGPITCGDIAK
VGQLVGKPQQVVSSEEGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSA
ICRFEKLDITPKSAQKLKPVLEKWLAEAEHWNQKGQQNLMEFVGGEPSKKRKRRTSFTPQ
AIEVLNSYFEKNALPTGQEITEIARELNYDREVVRVWFCNRRQTLKNTSKINIFQIQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccaggatccccctgccaaagatgccccacttacagtcaatgagcaggtcatt
gtgatgtccagccatgagactattcgtgtgctagaggtagaagtcgatgcatctctgcca
tcatcagtacccgatgggaagggtgaagtcaaagctgaggagggagtggctcggcctgca
gatcaacctgaggctgacagcatacaggacggccccactatgcctcagagcactggggga
ggagtgctgggtgagcagcaggtggtgtctgtcgaggttgctacccctgctgtccaaacg
ctgactcctgctgttcccgtcagtttgtccctgtcgcaaccccaggccaccatgcccatc
actgtaggctgtccacaggtgctgacccaggaaagtttggccactctgatgactagtatg
atggcccagaccggatctctggggcagcccctgctcatccccatcagtatggcgggctcc
atcggtggccagggaggtctggctgttctcactttacccaccaccaacgtagcttctctc
cccgggctcacggcagctaacacagctggaaaccttctcaaactgccctttgctggcctc
caagctgcgacagtcctgaactctgtccagccccaagctcagacgatgttccagcctcaa
gctgccatacagccagtgcaggtgacgtctcatccgacacaggtgaccaacgcacaggtt
accgccgctcaggtggcggcagcccaggccgccactaccgtctctcagtccaacatatct
ttagcagcgctacagacggcaggactctccatcaatcctgccattatcaatgctgcatcc
ttggtaactcagccacagttcctcagttccctctcctccactcctatcttcactagtgcc
atgtccaacatggccggcatcaccagccagatcatcacaaatgcccagggacaggtcata
ggaaccctccctcttttgttgaacccagcctctctggctggaggggctgggacatccacc
ctccagggtctccagggtctgcagggatttcagggtctgcagggtctgcagggtctgcag
ggtctccagggtcttcagggtctgcaaagtctgcaaggtctgcaaggcttgcaaggcttg
caaggtctccagggtctccagggtctccagggtctccagttccagactgtcaccccacag
ctgcttctcaacaaccagggccagattattgccacagtagggaatggatctgcagttaca
acttctgctgcagttctgcccaaagctgctgctcccccaacacttaccaaacctatcaca
caggcttctgtaacaactgtcagtcagtcaccaattgtcatcgctcctcagccgtctgta
ctgaagactgccagcatgctctcctccacaggacccatcacctgtggagacatagcaaaa
gtgggccagcttgtcggcaaaccccagcaggtagtcagcagtgaggaaggcattaatctg
gaagagattcgagagtttgccaagaatttcaagatccgccggctgtccttggggcttact
cagacgcaagtagggcaggcacttactgcaactgagggtcctgcctacagccagtctgcc
atttgcaggtttgaaaagctggatatcacgcccaagagtgctcagaagttgaagccggtg
ttggagaagtggctggctgaggctgagcactggaaccagaaaggccagcagaatctgatg
gagtttgtcggcggtgaaccatcaaagaaacgcaaacggcgtactagtttcacaccgcag
gcaatcgaagtacttaactcttactttgagaagaatgcattgccaacaggtcaagagatc
acagaaattgcaagagagctaaactatgaccgagaggttgtgcgagtttggttctgtaac
cggaggcagacactgaaaaacacaagcaaaatcaatatcttccagattcagtaa
DBGET
integrated database retrieval system
