Anoplopoma fimbria (sablefish): 129099855
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Entry
129099855 CDS
T09102
Symbol
trim33
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129099855 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129099855 (trim33)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129099855 (trim33)
Protein kinases [BR:
afb01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
129099855 (trim33)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129099855 (trim33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
zf-RING_UBOX
PHD-1st_NSD
UvrA_inter
SF-assemblin
Imm68
Motif
Other DBs
NCBI-GeneID:
129099855
NCBI-ProteinID:
XP_054465243
LinkDB
All DBs
Position
12
Genome browser
AA seq
1186 aa
AA seq
DB search
MADNKGEEDMEPSASAEPASSAQDSEQPETTADGAVVAGEAAGTGGEDTEPRDAADEPPT
AASDGGGGDGGATAAAAAAGEVQGSPAGTSSSSADPPAAEAPAAAEAAVGGLSTEMXPPQ
TAPAPMNYLDTCAVCKQSLQSRDCEPKLLPCLHSFCLRCLPQPDRQISVQVPGPHGQTDT
HIVNVMRCSVCHQDYKQSDIIDNYFVKDTSEATSASDEKSAQVCTSCEDNAGTIGFCVEC
SEWLCKTCVEAHQRVKITKDHKIHTNEDADAASESVGTSGQRPVFCPVHKQEPLKLFCET
CDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETSVAKLQEKKNYVHYSVSQVQSRLKE
LNETHKKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSMRLVSQHKDTTQLAQQIH
HVLSFCQWAISTGSSTALLYSKRLILFQLRQLFKARLEPAPQANGVVRFFCDPTFWAKNV
VNLGNLVIEKPPQPVQQPGVMVGGPPISPGQGHGKHPGQINLAQLRLQHMQQAAYAQQKH
QHQHHQQQHQHQQQIQQQMRIASQMSQQHARQAGQPMGQQQPPRLISMQQLPRGPGGMNG
GPGPPMYPSSHHMRLPGPPQGRMPTAQPRLNGQQYPAMMQPQLQRQHSNPGHAGPFPVAS
LHNANPTSPTSASMAGAHAHRGPASPIIGPIELIPSVTNPENLPCLPEIPPIQLEDAGSS
NLGHLLSRYITASTQHHLGSVDMNPSPGLSTHSPGSSGLSNAHTPARPSSTSSTGSRGSC
SSAGRAGPGGGAPVEQVRVKQEPGTDDSYSCPASSLKTEWGKDAGRSDCMMSSPENSPLP
VLGVVSAGQDAVKALGERIKTEPQSETPCSGLNGSSAATTTTTSSSSNSTMTFTTSLSSE
NSSSSTAGATLTNGNSNKGTDTKGDGALAGTGTSGGKEDDPNEDWCAVCINGGDLLCCDR
CPKVFHMKCHVPTIKIFPTGDFLCTFCRSLTTPEIEYSEDSKRVKGEQDLSPEDQRKCER
LLLHIFCHELSVGFREPVPSSVPNYYKIIKQPMDLKKVKRRLQLRSSQYYKSIQEFVSDM
RLIFTNCANYNEMSRIIQVYDEEKQINMQVGSEMAISGKAVSLYFEEKLQEMFPGQSFPE
TPETPETECPETNEKVDDGDTDDSEDDFIQPRRKRLKTDEKVYHIK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaggaggatatggagccgtctgccagcgcggagcccgcgtcc
tcagcgcaggacagcgagcagccagagacgacggctgacggcgccgtggtggcgggagag
gcggcggggacgggcggggaggacacggagccccgggacgccgcggacgagcccccgacg
gccgccagcgacggaggaggaggagacggcggcgctactgctgctgctgctgctgcgggg
gaagtccagggcagcccggccgggaccagcagctcctccgcggacccgcctgcagccgag
gccccggccgccgcggaggctgcggttggcgggctgtccacggagatgntccccccgcag
acggccccggctcccatgaactacctggatacgtgcgcagtgtgtaaacaaagcctgcag
agcagagactgcgagcccaagctgctgccctgcctgcactccttctgcctcaggtgtctc
ccgcagccagacaggcagatcagcgtgcaggtgcctggaccccacggacagacagacaca
cacatagtaaatgttatgcgctgttcggtgtgccaccaggactacaaacagagcgacatt
attgacaactactttgtcaaagatacttcagaggccaccagtgcgtctgatgaaaagtct
gcacaggtgtgcaccagctgcgaagacaacgcaggaaccataggcttctgtgtggagtgc
agcgaatggctgtgtaagacctgcgtggaagcccaccagagggtcaaaataaccaaggac
cacaagatccacacgaatgaggatgccgacgctgcctccgagtctgtcggtacatcagga
cagaggcctgttttctgtcccgtccacaagcaggagccactgaagcttttctgtgagacc
tgtgacactttgacctgcagggactgccagctgctggagcacaaggagcacaggtaccag
ttcctagaggaggccttccagaaccagaaaggcatcattgagaccagcgtggccaaacta
caggaaaagaagaactatgtccattactctgtctctcaggtgcaaagcaggttaaaagag
ctgaatgagacacacaagaaggtggagcatgagatcaaaatcgcagtatttactcttatt
aatgagatcaacaagaagggcaagtccctgctgcagcagttggagagcgtgaccaaagag
cgcagtatgaggcttgtgtctcagcataaggacaccacccagctggcccaacagatccac
catgtgctcagcttctgccagtgggccatctctaccggcagcagcacagcgctgctctac
agcaagaggctgattctgttccagcttcgccagcttttcaaggctagactggagccggcg
ccccaggccaacggagttgtacgcttcttctgtgaccccaccttctgggccaaaaacgta
gtgaatctaggtaatttggtaatcgagaagccacctcagcctgtgcaacagcccggcgta
atggtaggaggaccacccatttctccgggccaaggtcacggcaaacacccgggacagatc
aacctggcccagctccggctgcagcacatgcagcaggcggcctatgcacagcagaagcac
cagcaccagcaccaccaacaacagcaccagcaccagcagcagatccagcaacagatgcgc
atcgcctcccaaatgtcccagcagcacgccagacaggccgggcaacccatgggtcagcag
cagcccccaagactcatcagtatgcagcagctaccgagagggcctgggggtatgaatggt
ggaccaggtccccccatgtacccctcctcccatcatatgcgtctcccgggtccaccacaa
ggccgaatgcccacggctcagccaagacttaatggacagcagtatcctgccatgatgcag
cctcagctacagagacagcattccaacccaggccacgcaggccctttcccggtggcatcc
cttcataatgccaaccccacaagtcctaccagtgccagtatggcgggtgcccatgctcac
cgcggacctgccagccccatcatcggtcccatcgagctcatcccctcggtcaccaatcct
gagaacctgccatgcctacctgagatcccgcccattcagctggaggacgcaggttctagc
aaccttggacacctcctgtctcgatacatcacagccagcacgcagcatcaccttggctca
gtggacatgaacccctcacctggactgtccacacactctcctggatcttcaggtctgtcg
aatgcccacacaccagcacgaccttctagcacgtccagcacaggtagcaggggcagctgt
agctctgcggggagggcggggccaggaggtggagctccagtggagcaggtgagggtgaag
caagagcctggtacagacgacagctacagctgtccagcttcttctctgaagacggagtgg
ggcaaagatgccgggaggagtgactgcatgatgagcagtccggagaacagcccccttcct
gtattgggagttgtatctgctggccaagatgctgttaaggctttaggggagcgcatcaaa
acagaaccccaatctgaaactccttgttctggactaaatggctccagtgccgccaccacc
accaccacctcctcttcttcaaattccactatgactttcactacctcattatcctcggag
aacagcagcagcagcacggcaggtgccacgctcactaatggaaactccaacaaagggacg
gacaccaaaggggacggggcgttggctggaacgggcacctctggtgggaaagaggacgac
cccaatgaagactggtgtgctgtttgtatcaacggtggtgacctgctatgctgtgaccgc
tgccccaaagtgttccacatgaaatgccatgtgcccaccataaaaatcttcccaacgggt
gactttctttgcacgttttgccggagtctgaccaccccagagatagagtactctgaagac
agcaagagagtcaaaggagagcaggacctgagtccagaggaccaaaggaaatgtgaacgc
ctcctgctgcacatcttctgtcatgagctcagcgtgggcttcagggaacctgttcctagc
tctgtgcccaactactacaagattattaagcagcccatggacctgaagaaggtgaagagg
aggctgcagttacgaagctcccagtactacaagtccatccaggagtttgtctccgatatg
cgtctgatcttcacaaactgcgcaaattacaatgagatgtctcgaataatccaggtttat
gatgaggagaaacagattaatatgcaggtgggatcagagatggcgatatccggcaaggca
gtaagcctgtactttgaggagaagttgcaggagatgttcccaggacaaagcttccctgaa
acacccgaaacacctgaaaccgagtgcccggaaacaaatgaaaaggtggatgatggcgac
acggacgactccgaggacgacttcatacagcccagacgcaagcggttaaaaacggacgaa
aaagtgtaccacatcaagtga
DBGET
integrated database retrieval system
