Anoplopoma fimbria (sablefish): 129099942
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Entry
129099942 CDS
T09102
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129099942 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129099942 (asxl1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
129099942 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_3
Motif
Other DBs
NCBI-GeneID:
129099942
NCBI-ProteinID:
XP_054465375
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All DBs
Position
12:complement(8937152..8954316)
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AA seq
1263 aa
AA seq
DB search
MSEASEVAASVLESDVATGTPKRRSVGRRRRDGRMRRRTRADLRRRARRTLCKATPPALQ
SAEAAEASAALDSPAVSIGSPMSDDTVVQGEVVLQAECGVELPAESASIEPKPSPTPEPV
TLPASAPAPAAAPAPAPAPAPVPVPVPVPVPAPAPAPAPAPAPAPAPAPLQLPRPLPRPL
PLPLPLPLQLQLQLQLPLPLPLPLQLPLPLPAPAPAPAQPPPAQTRSLKQRPACSQWRFH
LYWHPPPHHLLPPPPPPPPLLLHLPPRLFPHPPHLLIDRECLPQAWTLLHPPQRPPVPQS
LPIRWMTPPLWSPLLQEVPPPAAVRVAPQPAQPPPLCPVLSSRSRREGQMRLRPSPASPK
RGRGLTTVSPFVPQLTVSVQRSRSRQQRSPRCRQSGFNCPESNLPGSKVTPPTRSVPGSC
PPARARGGLARGARAPWRTSKPVPSKPGPSARPLLLLQPLAKGQGRPASGCGLLLGYRIA
PMEDEPESIQDLSSQEEEEEEEGGGGGGGRGGRGSGRRGGGGMEEQGSSTGTNSSGTQLQ
LLNVEPTLQPSPSLSTSSTSMSLEPPQTPSPPRGEAAGGSEAGEEVEATPASVQSSFNGL
ADKAADSPSPKPELPESATAPAEMADQGSEKPPLAPTSIPDSLPRFGAQGVDVIQTLASS
FQSKEQVQVKEAGLCGVIQHSSYHVEHKEVFSPSAAERQQTDASFPQNADSGGEKDDEAG
THSDSTETASDCENDIQEDEQQQPDQDWCPQVSIKRNGQLVICSPPPQNQQPVIQAYVSS
RQGPTVIQPCFPNGLPHPQHSGPHSKDHQSLPTAHPQGLRDTNVVVKMEPGDDCRASRES
SAEEEFRESLKLSVTHPTAAGASKRLASSVRPVSSVEANNPLVTQLLQGSLPLEKVLPSH
SANRLEISRLPGPQPRPPVARTPGLRSRPEVSAQGPSPELGAASQIHNQSPTGCPVSCLM
EAPAPLQYQSQQAPGAVPVITSLPPSSSSLSFRSKSDLGSLTAIESAVIKDSHGPQPSQG
LAPDRPQPAHRTMPIGPSPPHADPCPTEVLPTIKINWRASHTQPPISHQLQLSPAPTVKN
EVGVRPYCQVLAKSVSIKPMSVTKKEPGGSVDGYLSGGAMEGLLNMEMTFARMAKKEHSK
STYSSGSPSSSSPSPSALPFQLYGKFPKHGGVGGVSYTANVSVMDNGGFSRSMADSVLQL
RPRLASSQTTLSIQAFTDTTAEEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCL
VVR
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagccagtgaagttgcagccagtgtgctggagagtgatgtggcaactggtacg
cccaagagacgcagcgtgggtcggcggaggagagatggcaggatgaggagacgcacgcgg
gctgacctgcgtcggcgggcccgccggaccctctgcaaggccactcctccggccctgcag
tctgcagaagcggctgaggccagtgctgcactagacagcccggcagtatctattggctct
ccgatgtcagacgacacggtcgttcaaggggaggtggtcctgcaggctgagtgtggcgtg
gagctcccagctgagagcgcctccatagagccaaagccctctcccactccagagccagtc
acattgccagcctccgctcctgctcccgctgctgctcccgctcctgctcccgctcccgct
cccgttcctgttcctgttcctgttcctgttcctgctcctgctcccgctcccgctcccgct
cccgctcccgctcctgctcccgctccgctccaactcccacgcccactcccacgcccactc
ccactcccactcccactcccactccaactccaactccaactccaactcccactcccactc
ccactcccactccaactcccactcccactcccagccccagccccagccccagcccagcct
ccaccagcacaaacgaggagcctgaagcagcggcccgcctgctcccagtggagattccac
ctgtactggcatccacctcctcaccatcttcttcctcctcctcctcctcctcctcctctt
cttcttcatctgcctcctcgcctgtttcctcaccctcctcaccttctgatagacagggag
tgtttgccgcaggcctggactcttcttcatcctcctcagcgtcctccagtgccgcagtcg
ctgccgatccgctggatgacaccgcctctgtggtcacctctattacaggaggtaccgcca
ccagcagccgtgagagtagcccctcagccagcccagccaccacccctgtgcccagtgctc
agctcaaggagcagaagagaaggccagatgagactcaggccttctccagcttccccgaaa
agaggccgcggcttgacgaccgtcagtcctttcgtaccacaattgacagtgtccgttcag
agaagccgcagccgacagcagaggagcccaaggtgccgccaatccggattcaactgtcca
gaatcaaacctccctgggtcaaaggtcaccccacctaccagatctgtccccggatcgtgc
cccccggcgagggctcgcggcggtctggcacggggggcgcgcgcaccttggcggacatca
aagcccgtgcccagcaagcccgggcccagcgcgaggccgctgctgctgttgcagccactg
gcgaaggggcagggccggccggcgtcaggctgcggacttcttctgggctaccggatagca
ccaatggaagacgagccagagagcatccaggacctatcgagccaggaggaggaggaggag
gaggaggggggggggggaggaggaggaagaggaggaagaggaagtggaagaaggggaggt
ggtgggatggaggagcagggatcgtctacaggcacaaattcgtctggaacacaactacag
cttctcaatgtagagccaacgctacagccatccccttccctgtccacttcctcaacctcc
atgtccttggagcccccacagaccccaagccctcctcgaggggaagcagctggggggtca
gaggctggagaggaggtagaagcaacgccagcaagtgtccagagttccttcaatggactc
gcagacaaagcagccgattcgccttccccaaagcctgagttgcctgagtctgctactgcc
cccgcagaaatggctgaccagggttctgaaaaacccccactggccccaacctccattcca
gactcccttcccaggttcggggctcagggtgtggatgttattcagacgttggcaagctcc
tttcagtccaaagagcaggtccaagtgaaggaggctgggctttgtggagttatccagcat
agttcctaccacgttgaacacaaggaggtattctctccctcagctgcagagagacagcaa
acggacgcatcctttccccaaaatgcggactctggtggagagaaagacgacgaggctggg
acacatagcgactccacggaaacggcgtcagactgtgagaatgacatccaggaggatgag
cagcagcagcctgaccaggactggtgcccccaagtgagcatcaagagaaacggccagctg
gtcatctgcagccctcctcctcagaaccagcagccagtcatccaggcctacgtgtccagc
cgtcaaggtccgactgttattcagccctgcttccccaacggcctgcctcaccctcagcac
agcggccctcattctaaggaccatcagtccctccccacagcccacccacaggggctcagg
gacaccaacgttgtagtcaagatggagcctggagatgattgtagagcctccagagagagt
tctgctgaagaggagtttcgtgaaagtttaaagctctctgttactcacccaactgctgca
ggtgcctccaagagactggccagttcagtcagaccggtatccagcgttgaggccaacaac
cctctggtcactcagctactgcagggcagcctgcccctggagaaagttctaccgtcacac
tctgccaacaggctggagatcagccgattgccaggaccccaacccagaccaccagtggca
aggaccccagggcttcgcagtaggcctgaggtctcagcccagggtcctagcccagaactt
ggtgcggcctcccagatccacaaccagtctccaacgggttgcccagtgtcctgtctgatg
gaggccccagctccactgcagtatcagtcccagcaggctcccggggctgtcccagtcatc
acctctctgccgccctcctcatcctccttgtccttcagaagtaagtcagaccttggttct
ctgacggcgatagagtctgcagttataaaagactcacatggtcctcagccctcccagggg
cttgctccagacaggccgcagccggcccaccgaaccatgcctattggcccctctcctccc
catgcagacccctgtcccacggaggtgttgcctaccattaagatcaactggcgggcctca
catactcagcccccaatctctcaccaactgcagctgtctcctgcacctacagtaaagaat
gaagtaggtgtgcggccctattgccaggttcttgccaaatcggtctccattaaacccatg
agtgttaccaaaaaggagccggggggctctgtggacggctacctgagcggaggggcgatg
gaggggctccttaacatggagatgacttttgccagaatggcaaagaaggagcacagcaaa
tctacctactcctctggctcgccctcctcctcctccccctccccctctgcccttcccttc
cagctgtatgggaagttccccaagcacggtggtgttggaggagtaagctacacagccaat
gtgtcagtgatggacaatggcggtttctcccggagcatggcggacagtgtgctccagctg
cgcccccgcttggcctccagccagaccaccctcagcatccaggcctttactgacactaca
gctgaggaggtggcgctcaaatgctcgtgccgcctaaaagccatgatcatgtgccaaggc
tgcggtgccttctgccatgacgattgcatcgggccctccaaactgtgcgtgtcatgtctg
gtggtgagataa
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