Anoplopoma fimbria (sablefish): 129099944
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Entry
129099944 CDS
T09102
Symbol
wdr46
Name
(RefSeq) WD repeat-containing protein 46 isoform X1
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129099944 (wdr46)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129099944 (wdr46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
EIF3I
Beta-prop_WDR5
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
B-prop_COPA_B_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
129099944
NCBI-ProteinID:
XP_054465377
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Position
12:complement(23261482..23270159)
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AA seq
582 aa
AA seq
DB search
MASPGDAAVNVTHVEKNKKQPPARYWEEVKDENKDGEQAPQQNAKKRKQSEDHGDRNRVI
SGKSDPFPGDAPIPEDRLQKFKRKEKTKKPRRQHYKLKDMITRSEETSEMAQKQAARLDL
LLPEDAGFLEGDEDEDTCTISQEDIADSVDITSGTKYFNLKLSQFGPYRVDYSKTGRQLL
LGGRRGHVACIDWQSKQLMCEINVMESVNDVKWLHSEAMYAVAQKKWLYIYDSNGIELHC
IRKFNDVLRMQFLPYHFLLATASATSFLQYLDVSVGKEVSAICTKTGRLDVMCQNPHNAV
IHLGHSNGTVTLWSPNQKEALVKMLCHQGAVRSVAVDKTGTYMVTSGMDKKLKVYDIRTF
KPLKSYFLPAGASCLSLSQRGLLSAATGDIVQVYRDVWSTPVTKPYMAHRVQKTVWGTHF
CPFEDVLGVGHGDGFTSMLIPGSGEPNFDGLDANPYRSAKQRQEWEVKALLEKIQPELIS
LDPTELGRVDRATFEMRHQDRVQALGFDPLAKEKFIPRHKKKGRSSAGSVQKRKRKVAHE
DLRDDIRKSAEDKLKIEKERKGKERKEAVLSSQKSALDRFKK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcccggcgacgcagcggtgaatgttacacacgtggagaaaaataagaagcag
cctccagctcggtactgggaggaggtgaaggatgaaaacaaagatggagaacaggctcct
caacagaacgcaaagaaaagaaaacaaagtgaagatcatggagatcgaaacagagtcatc
tcagggaaatcagaccctttccctggggatgctcctattccagaagacaggttgcagaag
ttcaagaggaaagaaaaaactaagaagcctcgccgccagcattacaagctgaaggacatg
atcactcgctcagaagaaacttcagaaatggcccagaaacaagcggctcggcttgacctc
cttctcccagaggatgctgggtttctagaaggagatgaagatgaggacacttgtacgatc
tctcaggaggacattgcagattctgtggatataacatctgggacaaagtattttaatctg
aaactgtctcagtttggaccatatcgagtggattacagcaagactggacgtcaactgctg
cttggtgggaggagaggccacgttgcttgtatcgactggcagtccaagcagctgatgtgt
gagataaacgtgatggagtctgtcaatgatgtaaagtggctccacagtgaggccatgtat
gcggtggctcagaagaagtggctgtacatctatgactccaatggaattgagcttcactgc
atccgcaaattcaatgacgtcctccgtatgcagttcctcccctaccactttctgctcgca
acagcgagtgccaccagtttcctgcagtacctggacgtatccgtgggaaaggaggtgtca
gccatctgcaccaagacgggccggcttgacgtgatgtgccagaaccctcacaacgccgtc
atccacctcggccactccaacggcacggtgaccctctggtcgcccaatcagaaagaagcc
ctcgtcaagatgctctgtcaccagggcgccgtgcgctctgtcgccgtggacaagacgggc
acatacatggtgacatctggcatggataaaaagctgaaggtatacgacattagaaccttc
aagccgctcaagtcctacttcctccccgccggagcgtcctgcctgtccctgagccagagg
ggactgctgtctgcagccacgggggacatcgttcaggtgtacagagacgtgtggagcacc
ccggtgactaaaccctacatggctcacagagttcagaaaactgtgtgggggacgcacttc
tgtccctttgaggatgtcctcggggtgggacacggagacggtttcaccagcatgctcata
ccaggttcaggggagccgaacttcgacggtctggatgcaaatccgtaccgcagtgcaaag
cagaggcaggagtgggaggtcaaagcgctgctggagaagatccagccagagctcatcagc
ctcgaccccaccgagctggggagggtcgaccgtgccacctttgagatgaggcaccaagac
cgggtccaagctctgggctttgacccacttgccaaagaaaagtttattcccaggcataag
aaaaaaggtcgcagttcggccggcagtgttcaaaagcgcaagagaaaagtggctcatgag
gatctgagggatgacatccggaaatctgcggaggacaaactgaagattgaaaaagagaga
aaggggaaggagaggaaagaggcggtgttatcgagccagaaatctgctctggacagattc
aaaaagtag
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