Anoplopoma fimbria (sablefish): 129099964
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Entry
129099964 CDS
T09102
Symbol
pym1
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
afb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129099964 (pym1)
03015 mRNA surveillance pathway
129099964 (pym1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129099964 (pym1)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129099964 (pym1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
FAM199X
DUF2152
GvpG
DUF7825
MMPL
Motif
Other DBs
NCBI-GeneID:
129099964
NCBI-ProteinID:
XP_054465401
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Position
12:complement(16529676..16533274)
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AA seq
211 aa
AA seq
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MATPYVQDESDEAYNELGKYIAATQRPDGTWRKPRRVKDGYTPQEEVPVYENKFVKFFKG
KPDLPPGMNPSEADPTKQKIPGCGDVDTAGLSKAAKRNMKRKEKRKQQHQDGDADVDSVS
DAVENVSISESRESSNKTAAPVSVSAPDDSLADAAEKAKKIKNLKKKLRQVEELQQKVNS
GEITEPTADQLEKLGRVKVLQDELKQLERDS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccctatgtgcaagacgaatctgatgaggcctataatgaattagggaaatac
attgctgccactcagcgacctgatggaacatggaggaagccgaggcgggtgaaggatggt
tacactccacaggaagaagtaccggtctatgaaaacaagtttgtgaagtttttcaagggc
aaaccagacctgccacctgggatgaatccgtccgaggcggatccaacaaagcagaagatt
cccggttgcggggacgttgacacggccggtctctcaaaggctgccaaacgcaacatgaaa
cgtaaagaaaaacgaaaacagcagcaccaggacggggacgcagacgtggactcggtgagc
gacgccgtcgagaatgtttccatttcagagagccgcgagtcttcaaacaagacggcggcg
ccggtttctgtctcggctcccgatgactccttagcagatgcagccgaaaaggccaagaag
atcaaaaacctgaaaaagaagctgcggcaagttgaggaattgcagcagaaagtgaactca
ggggaaataacagagccaacagcggatcagttggaaaagctgggtcgggttaaggtctta
caggatgagttaaagcagcttgagcgtgattcttga
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