Anoplopoma fimbria (sablefish): 129100018
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Entry
129100018 CDS
T09102
Symbol
fgd1
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129100018 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129100018 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
129100018 (fgd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
PH_13
FYVE_2
RHG20_PH
PH_16
C1_1
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129100018
NCBI-ProteinID:
XP_054465487
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Position
12:27471204..27489837
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AA seq
968 aa
AA seq
DB search
MTGFVFCCAMYMDRSMTRGPSPSSPSLLPEGVCVEACSPRHQQGALEADAPLSSAPGPAS
LQGGAGPPETPTTPPRKSRPKPQVPRSPHLQQQAGVLRPRPRAPDKPLPPPCRPLPVDPR
GPGPAHPGDGTASPTCVLSLIEKFEREQIIVVPDISGGSVXSAPDPPASSRPSSPPSSSS
PAPPPEEEPPSELKGPDDVTXGGEGEEGDGGHDDDDDDDDEELAAACRDDLHQKRLSMES
GYSASEKHLEEDAVAVEMREQPPLLDQSELPSERLSLPSSQTEGKLANRDSGIDSISSPS
HSEELCFAGVDDGGVAYPCSPALLPRLSSSSSYAGEGGEEGEARTGGARRRREFSEEGDS
DLEEEEAELTLVLPPPKTDRQDSAELSVQQRVFNIANELLHTETGYVSKLHLLDQVFCAR
LLEEARSRSSFPCDVVQGIFSNICSIYCFHQQFLLPALQKRMEEWDSNPRIGDILQKLAP
FLKMYGEYVKNFDRAMELVNIWMERSSQFKSIIQEIQREERCGNLTLQHHMLEPVQRIPR
YELLLKDYLHRLPEEAPDHRDAQKSLELIATAAEHSNAAIKKMDRMRKLLKVYELLGGEE
DIVNPTNELIREGHILKLSNKNGTTQDRYLILFNDRLLYCVPKLRLIGQKYGVRARIDVD
GMELKETSSVAGSRTFLVSGKQRSLELQARTEEEKKDWIQAIQATIQRHETTMESFRHLT
CSLREDESTPPHSPSCVELGKRAPTPIREKEVTLCMKCQEPFNSITKRRHHCKACGHVVC
GKCSEFRARLSYDNNRTNRVCVDCYAMLVGASPSPATLSSSTHRRRSILEKQASLAAEHS
VICSFLHHMEKGGGRGWQKAWFVIPENEPLVLYIYGAPQDVKAQRSIPLIGFEVALPESC
DRLERRNAFKISQSHLTLYFCAEGEELQRRWMDVLLRAGRGEEPQVHRPIVESVEEEGEE
LAAEEENT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatttgtgttttgctgcgcgatgtacatggacagaagcatgacgagaggcccc
tccccctccagtcccagtctgctgcctgagggtgtgtgtgtggaggcctgttctccgcgt
caccagcagggggcgctggaggccgacgcgccgctgagctccgccccgggccccgcctcc
ctgcagggaggggcggggccgccggagaccccaacaacaccaccgaggaagagcaggccc
aaaccccaggtcccccgaagcccccacctccagcagcaggcgggggtgctgaggccccgc
ccccgggctccagacaagcccctccccccgccatgcaggcccctccccgtggacccccgg
gggccgggccccgcccacccgggggacggcaccgcctcccccacctgcgtgctgtcactc
atcgagaagtttgagcgtgagcagatcatcgtggttcctgacatcagcgggggctctgtg
ntctccgcccccgacccccccgcctcctcccgaccttcatcacctccgtcatcttcttca
cccgcccccccaccggaggaggagccgccctctgagctgaaaggtcccgatgacgtcaca
ngtgggggtgagggggaggagggagacggtggccatgacgacgatgatgatgacgatgat
gaagagctggcggcggcgtgtcgagacgacctccatcagaagcgtctctccatggagtcg
ggttacagcgcctcagagaagcacctggaggaggatgccgttgccgtggagatgagggag
cagccgccgctgctcgaccaatcagagctgccctcggagcgtctgtccctcccctcctcg
cagacggaagggaagctggccaatcgggacagcggcatcgacagcatcagctctccgtcg
cacagcgaggagctctgcttcgccggcgtggacgacgggggcgtggcctacccctgtagc
cccgccctcctgccccgcctctccagctcctcctcgtacgcgggggagggaggggaggag
ggagaggcacggacgggcggggccaggaggaggagggagttctctgaggagggagacagc
gacctggaggaggaggaggcagagcttacgctggtgctgcccccccccaaaacagacaga
caggactctgctgagctgtctgttcagcagagggtcttcaacatagccaacgagctgctg
cacacagagactggctacgtctctaagctccacctcctggaccaggtgttctgtgctcgt
ctcctggaggaggcccggtctcgctcctccttcccctgtgacgtggtccaggggatcttc
tccaacatctgctccatctactgcttccatcagcagttcctcctgccagcactgcagaaa
cgcatggaggagtgggactctaacccacggatcggtgacatcctgcagaagctcgctccg
ttcctgaagatgtacggagagtacgtgaagaactttgaccgagcgatggagctggtgaac
atctggatggagaggtcgtctcagttcaagagcatcatccaggagatccagagggaggag
cgctgtgggaatctcactctgcagcatcacatgttggagccggttcagaggattcctcgc
tacgagctgctgctcaaagattatctgcaccgcctgccagaggaagccccggaccaccgg
gacgcccagaagtctctggagttgatcgccacagcagcagaacactccaacgctgccatc
aagaagatggaccggatgaggaagttgttgaaggtgtacgagttgttgggaggagaagaa
gacatcgtgaacccgacaaacgagctgattagagaaggacacatcctgaagctgtccaac
aagaacgggaccacgcaggaccgatacctcatactgtttaatgacaggttgctttactgc
gtcccgaagctgcgtctgattggtcagaagtacggcgtccgtgctcgcatcgatgtggac
gggatggagctgaaggagaccagcagtgttgcaggatccaggacgttcctggtgtctgga
aaacagagatcactggagctgcaggccaggacggaggaggagaaaaaagactggattcag
gccatccaggcgaccatccagagacacgagacgacgatggagagcttcagacatctcacc
tgttctctgagagaagacgagtccactccgcctcactccccgagctgtgtggaactcgga
aaacgagctccgactcccatcagagagaaagaagtgactctgtgtatgaaatgtcaggaa
ccgttcaactccatcaccaagagacgacaccactgtaaagcctgtggacacgtggtttgt
gggaaatgttcagagtttcgtgctcgtctttcatacgacaacaaccgcaccaaccgggtg
tgtgtggactgctacgccatgctggtgggggcgtcgccttcacccgccacgctgagcagc
agcacccacaggagacgctccatcctggagaaacaggcatccctggcagcagagcacagt
gtgatctgtagtttccttcaccacatggagaaaggaggtgggcggggctggcagaaggcc
tggttcgtcatccctgagaatgagccgctggtgctctacatctacggagctccacaggac
gtgaaggctcagcgcagcattcctctgattggcttcgaggtcgctcttcctgagtcatgt
gaccggctggagcgacgcaacgccttcaagatctcccagagtcacctgaccctgtacttc
tgtgccgagggggaggagctacagcggcgatggatggacgtcctgctgagggccgggcgg
ggggaggagcctcaggtccaccggccaatcgttgagagtgtggaggaagagggggaggag
ctggcagcggaggaggagaacacgtga
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