Anoplopoma fimbria (sablefish): 129100035
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Entry
129100035 CDS
T09102
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129100035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129100035
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129100035
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129100035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
zf-RING_6
zf-RING_11
zf-RING_UBOX
Baculo_IE-1
zf-rbx1
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
129100035
NCBI-ProteinID:
XP_054465512
LinkDB
All DBs
Position
12:12539125..12543790
Genome browser
AA seq
194 aa
AA seq
DB search
MENTRVSKSTEDCAICLDTIQEKKTLKCHHSFCSVCIDSVFKFKPACPLCNTYHGQYTGT
QPEGTMTVMRSWQRLPGFEDCGCIVIQYSFPAGIQGPEHPNPGVRYSSTSRTAFLPASDE
GEKVLKLLRKAFDRKVTFTIGRSVTTGLNNVITWNDIHHKTNLGGGPQCFGYPDPDYLFR
VQEELRLKGVTQDD
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacacgagtcagtaaaagtacagaagactgcgccatctgcttggacacaatt
caggagaagaaaacgctaaagtgccatcactctttctgctctgtgtgtatagactcggtt
ttcaagtttaagcccgcgtgtccgttatgcaacacctaccacggacagtacacggggacc
cagcccgagggcacgatgacggtgatgcgcagctggcagcgcctgcctggctttgaggac
tgtggatgtattgtcatacagtacagtttcccagcagggatacaagggcccgaacaccca
aacccaggggtgaggtacagcagcacctctcgtaccgccttcctgccagccagcgacgag
ggtgaaaaagtcctgaagctgctgaggaaagccttcgacaggaaagtcaccttcaccatc
ggacgatctgtcacgacaggcctcaacaatgtcatcacctggaacgacattcaccacaag
accaacctgggtggtggtccacaatgttttggatatccagatccagactatttgttcagg
gttcaagaggagcttcgtcttaaaggagtaacacaagatgactga
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