Anoplopoma fimbria (sablefish): 129100053 Help Entry 129100053         CDS       T09102                                  Symbol prpf6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism afb  Anoplopoma fimbria (sablefish) Pathway afb03040   Spliceosome Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     129100053 (prpf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:afb03041]     129100053 (prpf6) Spliceosome [BR:afb03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     129100053 (prpf6)  Complex C    U5 SnRNP specific factors     129100053 (prpf6) SSDB OrthologParalogGFIT Motif Pfam:  PRP6_TPR PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf TPR_16 HAT_Syf1_CNRKL1_N HAT_PRP39_C TPR_17 HAT_Syf1_CNRKL1_C TPR_2 TPR_8 TPR_1 FAT ARM_TT21_C ARM_TT21_5th Mt_ATP-synt_B Motif Other DBs NCBI-GeneID:  129100053 NCBI-ProteinID:  XP_054465532 LinkDB All DBs Position 12:24710454..24727958 Genome browser AA seq 924 aa AA seqDB search MGKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM KKNEEDEEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELR EKEEIEKYRMERPKIQQQFSDLKRKLAEVSEEEWLSIPEVGDARNKRQRNPRYEKLTPVP DSFFSKHLKTGENHTSVDPLQGLGGLSTPYPGSMTPGTGELDMRKIGQARNTLMDMRLSQ VSDSVSGQTVVDPKGYLTDLNSMIPTHGGDISDIKKARLLLKSVRETNPHHPPAWIASAR LEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYI RAAELETDIRAKKRVLRKALENVSKSVRLWKTAVELEEPEDARIMLSRAVECCPTSVELW LALARLETYENARRVLNKARENIPTDRHIWITAAKLEEANLNTQMVEKIIDRAITSLRAN GVEINREQWIQDAEECDKAGSVATCQAVIRAVIGIGIEEEDRKHTWMEDSDSCVAHGALE CARAIYAHALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS KWLAEDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARV FMKSVKLEWVLGNIEAAQELCTEALKHYEDFPKLWMMRGQIEEQCENMDKAREAYNQGLK KCPHSSGLWLLLSRLEERVGQLTRARAILEKARLKNAQSPDLWLESVRLEFRAGLKNIAN TLMAKALQECPNSGILWAEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKI TKAREWFLRTVKIEPDLGDAWALFYKFEQQHGTEEQQEEVRKRCENAEPRHGELWCAESK HVLNWQKKTGEILAGVASKIKNTF NT seq 2775 nt NT seq  +upstreamnt  +downstreamnt atggggaagaagaagaagccgttcctggggatgcccgccccgctgggctacgtacccggg ctgggacgaggtgcgactggtttcaccacccgatctgatattggtccggctcgtgatgcc aacgatccagtggatgaccggcatgcacctccggggaagaggacggtcggggaccaaatg aaaaagaacgaggaggacgaggaagatctgaacgacacaaattatgacgagttcaatgga tacgcaggtagcttgttctccagtgggccctatgagaaagacgatgaagaagcagatgct atatatgcagcactggacaagaggatggatgaaagacgcaaagaaagaagggagctgaga gaaaaggaagaaatcgagaaataccgtatggagcgacccaaaatccagcagcagttttca gatctaaagaggaaattggcagaggtgtcggaggaggagtggctgagcatccctgaggtg ggagatgccaggaataaacgccagagaaatccccgctacgagaaactcacccccgtcccc gacagcttcttctccaaacacctgaagaccggagagaaccataccagtgttgaccctctg caagggctgggaggtctgagcacgccttacccaggaagcatgacgccagggacgggagag ctggacatgaggaaaatcggtcaggccaggaacacactcatggatatgaggctcagccag gtgtctgactcggtgagcggacagacggtggtggaccctaaaggttacctgacggatctg aactccatgatccccacacatggaggagacatcagtgacatcaagaaggctcgtctgctg ctgaagtcggtgagggagaccaatcctcatcatccgccggcctggattgcctccgccagg ctggaggaggtgaccggcaaactgcaggtggccaggaacctgatcatgaaaggcacagag atgtgtcctaagagtgaggacgtgtggctggaggcagccaggcttcagcccggcgacaca gccaaagccgtggtggcccaggccgtccgccacctgccgcagtccgtccgcatctacatc agagccgcagagctggagacggacatcagggccaagaaacgagtcctcaggaaggccctg gagaacgtgtccaagtccgttcgactgtggaagacagctgtggagctggaggagccggag gacgccaggatcatgctgagcagagctgtggagtgttgccctacgagtgtggagctgtgg ctggcgctggcccggttagagacgtacgagaacgcccggcgtgtcctgaacaaagcccga gagaacatccccaccgaccgccacatctggatcactgccgccaagttggaggaggccaac ctcaacactcagatggtggagaagatcatcgacagagccatcacctctctacgcgccaac ggtgtggagatcaacagagagcagtggatacaggatgcagaggagtgtgacaaagcaggc agcgtggctacgtgccaggccgtcataagggccgtcatcgggatcggcatcgaggaggag gatcgcaaacacacatggatggaggactcagatagttgcgtggctcatggagctctggag tgtgccagggccatctacgctcacgctctgcaggtgttccccagcaaaaaaagtgtctgg ctcagagcggcctactttgagaaaaatcacggcaccagggagtctctggaggccctgctc cagagggccgtggctcactgtcccaaagcagaggtcctgtggctgatgggggccaagtcc aagtggctggctgaggacgtacctgccgccagaagtatcctcgctctggccttccaggct aacccaaacagtgaagagatctggctggccgctgtgaagctggagtctgagaataacgag tatgaaagagcccgtcgactgctagccaaggcccgcagcagtgcaccaacagccagggtt tttatgaagtcagtgaagttggagtgggtgttggggaacatagaagctgcccaggagctg tgcaccgaggccctgaaacactacgaggacttccccaaactgtggatgatgagaggccag atagaggagcagtgtgaaaacatggacaaggccagagaggcctacaaccaagggttgaaa aagtgtccccactcgagcggcctgtggttgctgctgtctcgtctggaggagagagtggga cagctgaccagagccagagccatcctggagaaggctcgactcaagaacgcccagagcccc gacctgtggttggagtcggtgaggctggagttccgtgccggactgaagaacatcgccaac acactgatggccaaagccctgcaggagtgccccaactcaggtatcctgtgggctgaggca gtgtttctggaggccaggccccagaggaagaccaagagtgtggacgctttgaagaagtgt gaacacgacccccacgtcctgctcgctgtagcaaagttgttctggagtgagcgtaagatc accaaagccagagagtggttcctcaggacagtgaagattgagccggacctgggagacgcc tgggctctcttctacaagtttgagcagcagcacggcacagaggagcagcaggaagaggtg cgaaagcgctgcgagaacgctgaaccccgacacggagagctgtggtgcgccgagtccaaa cacgtcctgaactggcagaagaagacaggagagatattagcaggggtagccagcaagatc aagaacacattctga

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