Anoplopoma fimbria (sablefish): 129100083
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Entry
129100083 CDS
T09102
Symbol
prdm2a
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129100083 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129100083 (prdm2a)
03036 Chromosome and associated proteins [BR:
afb03036
]
129100083 (prdm2a)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
129100083 (prdm2a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129100083 (prdm2a)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129100083 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_11
zf-C2H2_6
zf-C2HE
zf-C2H2_3rep
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
129100083
NCBI-ProteinID:
XP_054465575
LinkDB
All DBs
Position
12:complement(10004692..10012235)
Genome browser
AA seq
1403 aa
AA seq
DB search
MEDSPHLYISEIGDNEDMEEDGEEEEEEDDDDNNYQEETNIQPDMVKSLYPDLNKDPNQD
TEREWNSFPCQHCERHFTSRQGLERHMHIHTLENNEANAYKSHQSNISFGSNPGQSQHEK
MKSLDSVGSVMQLHTSSPTASNTSVLSAGDRSARSDKPGVLEGHHACKYCEKIFTTYTNK
RRHERRIHEQHLQVTHVEKXQLAQEENLQRMLSEPSQQETEMGDNTAPAAILENDVECAE
QYMLDVSSNISENLSFYIDGKIVSTSTVSNCDVPDVHSGSSSLVGLDALILDPSQISHVL
NTESVAGKEIPGQPQLKRRTATPPLLPQIKTELESEVVVSSSSSSSLVSSLIENLLPQNT
ESTVVQKERTVFLSPKLKQLLEKQDGLKPALALITDGQKPCSPVSLAVLAAGTGRFKRRT
GSPPSSPQQNPTSKDETADSGDCDAVNTGQIDNQYSPAVHQTANVKDDTTPPVEQPAVRP
VSTESSPPTAGGNSCNQQPLDLSNTVKRNEDLSLTDAALDLSFQKKTLGESELTFDLVSQ
AVLKAGNSSTCMTETALVNIGDQNVSLGNPEIPLVTDYTILTGPDVMTPMEPLAEGLVYG
LALPSNSLTPSPASLTPVALQPASPCTIAFASPASHTMLPTTSSLITVLAPSNMSNPSSQ
PIQLLAPNISPEPLVFCTENALNFSECDLTTAFATADSVNPVTLSQSLDPTLNLFLADLN
RPIVESIPMSDVPFTPTVTLTDSLINSYNITSNTVLIECTIALEAPESMVPAAVTLQENT
AEPPAPSQMVVNHIEQQQIVSVPNHQTVDHTILMSSIAESVTLSTTTSGISDCPTVGEST
TEPEHVVTAEPPTIKEEEAADSTVPMPEISSKTSSSSSSEKAQEEESSDGTPSEAQQQTF
TKNFICNVCDKLFHSMKELGHHVGNHADEWPYKCEFCVLLFSKPCALLDHRSSLHGVGKT
YVCSACTKEFVYLCNLKQHQEELHPGQQCTYTEEEKGKLRPQNYNNSIKVNMEPSVPGAA
EEAKKVVKKEKDEVEVADEELLSTIKIMASDGDKIKGPDVRLGINQHYPSFKPPPFPYHN
RSPAGSVASATNFTTHNIPQTFTTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPK
RNPIPLRHFAKTQNGVLSTTNSTNGLNASNRSSQSNRSKPSQESPVNVKFKVLNKRKKKL
VQRVMPQRNKSAPSSNKMSRAHVDEQQEIFVCPHCSREFTMRRSRTKHMAVCPKKPKEVK
KRKEGGISVTKENDGHLHRGVEEKQHASHQHKTRLQRSGPAKRPAILPVQTVFSNKRSKI
IIKESTQPKQETPTLNELPIVRTFNPSMRQYSRVQHSAKGIPIKFTIVKPQQAPPQKDEL
PPTESREQASGAVTSSSEQSPST
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctccacacttgtacatctctgaaattggagacaatgaggatatggaggag
gacggggaggaggaggaggaggaggatgatgacgacaacaattatcaagaggaaactaac
attcagccagacatggttaagtcactctaccctgatcttaataaagatcccaaccaggat
actgagagagaatggaactcttttccttgccagcactgtgagagacattttaccagcaga
caaggcttagaacgacacatgcacatccatactttggagaacaacgaggcaaacgcatac
aaaagccatcaaagcaacatctcttttggttcaaatccgggtcagtcgcagcatgagaag
atgaagtctctggattcagtgggctcagtcatgcagcttcacacttcatcccccaccgcc
tctaatacttccgttttgtcggccggtgaccgcagtgctcggtcagacaaaccaggagta
ttagaggggcatcatgcttgcaagtactgtgaaaagatattcactacatataccaacaag
cgacgacatgagcgtaggatccacgagcagcacctgcaagtcacacacgtggaaaaanaa
cagctggcccaagaggaaaatcttcagaggatgctcagtgaaccttctcaacaggaaaca
gagatgggtgacaatacagcacctgcagctattctggagaatgacgtggaatgcgcagaa
caatacatgctagatgtctctagcaatatttcagagaatctcagcttttatattgatgga
aagatagtgtcaacaagcacagtcagtaactgtgacgtacccgatgttcattctggttct
tcatccttagtcggactggatgccctgattctagacccatcccaaatcagccatgtttta
aatacagagtcagttgcaggcaaagagatacctggtcaaccacagctcaagagaagaact
gcaacaccacctcttttaccacaaattaaaactgaactggagtccgaggtggttgtgtct
tcttcttcatcatcttcccttgtatcttctttaatagagaatcttcttcctcagaatacc
gagtccacggttgtgcagaaggaaagaactgtgtttctgtctccaaagctcaagcagctc
ctggagaagcaggatggccttaaaccggcacttgccctcatcacagatggccagaagcct
tgttcacccgtctctcttgctgtcctggctgctggaacaggtaggtttaaaagaaggacc
gggtctccaccaagctctccacagcagaacccgacatctaaagacgaaacggcagatagt
ggagattgtgacgccgtaaatacagggcagatagataaccaatatagtccagctgtacac
caaacagccaatgtgaaggatgacacaactccacctgtggaacagccagcagtgagacct
gtctcgacagagagctcgccccctacagccggcggtaattcctgtaaccagcaaccactg
gatctctctaatacagtcaaaagaaatgaagacttatctttaactgatgcagcgctggat
ttgagctttcaaaagaagaccctaggtgaatctgaactgacatttgatttagtttcacag
gcagttttgaaagcaggaaattcaagtacatgcatgacggagacggccttagtaaatatt
ggagatcaaaatgtaagcctagggaatcccgagatccctttagtcacagactacacaata
cttacaggtccagatgtgatgaccccaatggagcccctggcagagggacttgtttatggg
cttgcgcttccctcaaattctctgactccatctcctgcatcccttacccctgttgccttg
cagccagcttcaccgtgcactatagcatttgcttccccagcctcacacaccatgctccct
actacttcttcattaataacagttttggcaccatcaaatatgtctaacccttcaagccaa
ccaatccagttactagcccctaatatatctcccgagcccctggttttctgcacagaaaat
gcgttaaatttctcagagtgcgatttaactaccgcatttgctactgcagattctgtaaac
cctgtcactctctcccaatcccttgacccgactctgaacctgtttctcgctgatctcaat
cggcccatcgttgagtccattcctatgtcagacgtgccattcacgcccaccgtaactcta
actgattccctcatcaactcttacaacattactagcaacacagtgttgatagagtgcact
atagctcttgaagccccagaaagtatggtccccgctgcagttaccttacaggaaaacact
gctgagcctccagcaccttcacagatggttgttaatcacatagaacagcaacagattgta
tcagtgcccaaccatcaaactgtggaccacactattcttatgtcctccattgcagaatca
gtgactctctccaccaccacctcagggatatctgactgtcctactgtgggtgaatcaact
actgaaccagagcatgttgttactgcagagccaccaaccataaaggaggaagaagctgct
gacagcacagttcccatgcccgaaatctcatctaaaacctcttcttcttcttcttctgag
aaagctcaagaggaagaatcctcagacggcacgccaagcgaggcgcaacagcagactttc
accaagaacttcatctgcaatgtgtgtgataagcttttccattcaatgaaagaactgggc
catcatgtaggcaaccacgctgacgaatggccctacaaatgtgagttctgtgtgctgctc
ttcagcaaaccctgtgctctgctcgatcatcgatcaagcctccacggtgtcggcaagact
tacgtttgcagtgcgtgcacaaaagaatttgtctacctttgtaatctgaaacaacatcag
gaagagttgcatcctggccagcagtgtacctacacagaagaagaaaagggtaaactaaga
cctcagaactacaataactcaattaaagtcaacatggagccatcagtgcccggtgctgca
gaggaagccaagaaagtggtgaaaaaggaaaaagatgaagtagaagtggctgatgaagaa
ctgttatcaacgataaaaatcatggcctcagatggagacaaaatcaaggggcctgatgtt
cgtcttggcattaaccaacattatcccagctttaagccccctccatttccttaccataac
agatcaccagctggctcggtggcttcagcaacaaacttcaccacccacaacatcccgcaa
acctttactacggctatccgatgcaccaagtgtggaaagagctttgataacatgccagag
ttacacaagcacatcctggcttgtgcaaatgccagtgataaaaggagatacacgcccaaa
agaaatcccatcccactacgccactttgcaaaaactcaaaacggagttctgtccaccacc
aattccactaacggactaaacgcttccaacagatccagtcagtcaaaccggtccaaacct
agtcaagaatctccggtaaacgtgaagttcaaggtgctgaacaaaaggaagaagaagttg
gtccaaagggtcatgccgcagaggaacaaatcagccccttcatcaaataaaatgtcccgt
gcacatgtggatgagcagcaggagatctttgtctgcccgcactgcagcagggagttcacg
atgcgtcgcagcagaaccaaacacatggcagtctgccccaagaaacctaaagaggtgaag
aaaaggaaagaaggaggaatctctgtgacaaaggaaaatgatggacacctgcatagaggg
gtggaagagaaacaacatgcctcacatcagcataaaaccagactccagaggtctgggcct
gctaaaaggcccgccatcctacctgtacaaactgtcttctcaaacaagagaagtaagatc
attataaaagagagcacgcagccgaaacaagagacacccacgctgaatgaacttcccatc
gttcgcactttcaacccctccatgcgccagtacagcagagtgcagcatagcgccaaagga
atccccattaaattcaccatagtgaaaccacaacaggctccaccacagaaggatgagctg
cctccaaccgagagccgagagcaagccagcggagccgtcaccagcagctctgagcagagt
ccctccacctga
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integrated database retrieval system
