KEGG   Anoplopoma fimbria (sablefish): 129100156
Entry
129100156         CDS       T09102                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03082  ATP-dependent chromatin remodeling
afb03083  Polycomb repressive complex
afb04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129100156
   03083 Polycomb repressive complex
    129100156
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    129100156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:afb03036]
    129100156
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     129100156
  Histone modification proteins
   HAT complexes
    HATB complex
     129100156
   HDAC complexes
    Sin3A-HDAC complex
     129100156
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     129100156
    PRC2.2
     129100156
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     129100156
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129100156
  Chromatin remodeling factors
   NuRD complex
    129100156
   NuRF complex
    129100156
   NuRF complex (fruit fly)
    129100156
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_RIG_1st ANAPC4_WD40 eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 MIOS_WD40 Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 129100156
NCBI-ProteinID: XP_054465688
LinkDB
Position
2:27126634..27135792
AA seq 427 aa
MADKDVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNTTSKASHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcggataaagacgtgtacgacgatgcggtggaggagagggtcatcaacgaggagtac
aagatctggaagaagaacacacctttcctgtatgacctggtgatgactcacgccctggag
tggcccagtctgactgtccagtggcttccagatgtcaacaggccagaggggaaggactat
gcagttcaccggctggttttgggaacccatacatcagacgagcagaaccaccttgtgatc
gccagcgtccaggtaccgaatgatgatgcccagttcgatgcctcgcactacgacagcgag
aaaggagcagagtttggtggatttggttcagtaagcgggaaaatcgagatagagatcaag
atcaaccacgagggagaggtcaaccgagcccgctacatgccccaaaaccactgcatcatc
gccaccaagactcccacatctgacgtgctcgtcttcgactacaccaagcacccgtcaaag
ccagatcccagtggggagtgtagtcctgacttaaggctgaaaggccatcagaaagaaggg
tacggcctctcctggaatcccaacctcagcggaaacctgctcagcgcctccgatgaccat
accatctgtttgtgggacatcggggccggcccaaaagaagggaagattgtggatgccaag
actatcttcaccggccacacagcagtggtggaagacgtgtcctggcatctgctccacgaa
tccctgtttggctcagtggctgacgaccagaaactcatgatatgggacactcggtccaac
accacgtccaaagccagccacgctgtagatgctcacactgccgaggtcaactgtctgagc
ttcaacccctacagcgagttcattctggccactggttctgctgataagactgttgcattg
tgggatctaaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaatt
ttccaggtacaatggtctcctcacaacgagaccatcctggcctccagcggcaccgaccga
cgtctcaacgtctgggatctcagtaaaatcggggaggagcagtcggcagaagatgctgag
gatggcccaccggagctgctgttcatccacggcggccacacagccaagatctctgacttc
tcttggaaccccaatgaaccctgggtcatctgctcagtgtccgaggacaacatcatgcaa
gtctggcagatggcggagaacatctacaacgacgaggagccagacaacacccctgcatca
gagctggaggctcagggttcataa

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