Anoplopoma fimbria (sablefish): 129100169
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Entry
129100169 CDS
T09102
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129100169 (apex2)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
129100169 (apex2)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
129100169 (apex2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
129100169
NCBI-ProteinID:
XP_054465702
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Position
12:complement(19734351..19737774)
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AA seq
583 aa
AA seq
DB search
MKVVTWNINGIRTFRGGIKEALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDQNEFCSEELQLLDNEGRAV
ITQHRIMCQEKEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAVVKDGSHVIVL
GDINTSHRQIDHCDPSDNDDFDENPGRKWLNAFLNSGKREEETKEEEPNEESEVTSSDAA
HSGKFVDTFRHFHPTRTSAFTCWSTLTGARQTNYGTRIDYVFADCLLAKEQFVAADIMPE
VEGSDHCPVWGQLSCSLLPSSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSSQSEQREA
LPGSQEEEERRENLNLSGSGNVSGKKRALTSDSVVPKGKKTKTVKTSSNPKGSLLSFFKP
KHTNAVPSTEASVKHCEKALGMDEVTSSQISQKAPSPTKDAFSVTSSVPEDAELVYDGSP
QLCTSSTAEENQKRMMTKLLTPNPTTGQPAVKKGASLGFWRTVFRGPPPPPSCKTHGEPC
VLRTVKKEGPNMGKQFFVCARPQGHASNPEARCNFFAWVDKGK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcacctggaacataaatggcattaggactttcagaggaggcattaaagag
gctcttgactcactggacgcggacattatttgcgtccaagaaacaaaagtgacaagagac
ttgcttgatgaaagaactgcaattgttgacggctacaactcttatttcagcttcagtcga
gggcgcagcggttattcaggggtcgccacttactgtaaagacagtgccactccatttgct
gctgaggagggtctcacgggtctgctgaccaaccacgaaggggccgttggatgctatggg
gaccagaacgagttctgtagcgaggagctgcagcttttggacaacgaaggacgagccgtt
atcacccagcacagaatcatgtgtcaggaaaaagagcaaactgtcactgtaatcaatgta
tactgtcctcgggctgaccctgaaaagccggagcgaaagcagttcaagctgcagttctac
aagttgcttcagagtcgggctgaagctgtagtaaaagatgggagccatgtgattgtttta
ggagatataaatacatctcaccggcagatagaccactgtgaccccagtgataatgatgat
tttgatgaaaacccagggaggaaatggctaaatgcctttttgaacagtggcaaacgagaa
gaagaaacgaaagaggaggaacccaacgaagaatcagaggtaacttcatcagatgctgcc
cacagtggaaagtttgtggacacctttcgccattttcacccaactcgcaccagcgccttc
acatgctggagcactctcactggagcgcggcagaccaactatggcacacgtattgactac
gtattcgccgactgcctgctggccaaggagcagtttgtggcagcagacatcatgccagag
gtggaggggtcggaccactgccctgtgtgggggcaactgagctgctctctcctgcccagc
tccaagcctcctcccctctgtacacgctacctgccagagtttgctggcaagcagcagaaa
ctctctcgcttccttgttaaagtggaccaaaaatcatctcagtctgagcagagggaagca
ttacctggatcgcaggaagaggaggaaaggagggagaatttaaacctgtccggatctgga
aacgtctccggtaaaaaacgggcattaacatcagactctgttgtcccaaaggggaaaaag
actaagacagtaaagacttcttcaaacccaaaggggagcctcctctcctttttcaaaccc
aaacacacaaatgctgttccttctactgaagcctctgtaaagcattgtgaaaaagcactc
ggcatggacgaagtaacttcctcacaaatctcccaaaaagcaccctcacctaccaaggat
gcattctcagtcacaagcagcgtacctgaagatgctgaacttgtctacgatggttcacct
cagctgtgtaccagcagcaccgcagaggaaaatcagaaacggatgatgacaaagctgtta
accccaaacccgaccacgggacaaccagctgtcaagaaaggggcatccttggggttttgg
aggacagtgtttcgtgggccgcccccaccgccctcctgtaagacccacggggaaccctgt
gtgctccgtactgtgaaaaaggaggggccaaacatgggaaaacagttcttcgtgtgtgcc
cgtcctcagggacatgcctccaaccccgaggcccggtgtaatttctttgcatgggttgac
aaggggaagtga
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