Anoplopoma fimbria (sablefish): 129100196
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Entry
129100196 CDS
T09102
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129100196
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129100196
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129100196
Protein kinases [BR:
afb01001
]
Serine/threonine kinases: Other
Other
129100196
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129100196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40
LisH
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
129100196
NCBI-ProteinID:
XP_054465743
LinkDB
All DBs
Position
12:23849119..23867439
Genome browser
AA seq
1550 aa
AA seq
DB search
MASASASVDSKAELTALLEQWEREQQGSTQELVSILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNTLVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRM
RELQDKDAENKRDIKRPSPRKTLSEPLLPLDEETVDGGFEEKPFTPGRNGAEREGAGPEE
DGDIPFTTIEPENELSFRLNSPHKTSSRANSAVKTMMKPISALMHQGVSDSSGYLKRKAE
RESGRTLKQKLNFSLPDPDRNFSELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLILQYL
TPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAH
GGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLECSHA
SGCCHATMFFSISFSFRAVLELFDRQDGLRRLVNLISTLEILNPEDQGALLSDDEIFSSR
QTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEMMEF
LIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILTVVP
KTQLLLSEAVAVLDEGGSTVSTVGMSIVLAVAEGEVFVNDADIQKSALQVVINCVCAPDK
RMSSIGKFIAGTPRRRLPQQTKASESVLTKMWNVVQSNNGIKVLLSLLTVKMPITDADQI
RALACKALVGLSRSTSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAELIE
RISGKPLMIGTDVSLAWLQRASVVAKSRISFPEKELLLLIRNHLMAKGLHDTATTLTKEA
DLPMACVSLSTHSASAFPPVAPPLPASPAATLPRTPRLANGVVSRLINHPSLLSTPGSSN
LQTRPSTSQSTVSSSAAFPSTSVAPCTNGSPLIGRIVFSRERQAGCTTVSCKKPRVLRQK
SDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTPHQCP
EPKQRRQAPINFTSRHNRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESGFMC
CAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSY
PLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQVTLTLNNPD
LANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVIVNTE
IWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQMKSPFGSSFRTFN
ATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEEEED
EEDQEDDDQDDDDDDDDSDDDVDTDPLIAELENENGGDDDDEEDDGNDEFSPSDEEVSRL
LEDGIDVGDDDDEDDNDDDDSDNDDVDLDGDNDSSDNSDLEDDIILSLNE
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggcatctgccagtgtggactctaaggcagagctgactgctcttctggaacag
tgggagagggagcagcaaggcagcacacaggagctggtcagcatcctcacgaaaatctca
gagcttgttgagaaagagacagaggagtaccacaaagcggaccccgacccttttgatgac
cgacaccctgggagagccgatccggaatgcgtgttaggacacctgctcaagatcctgttc
aagaatgatgactttatgaacacgttggtgaatagttatgtgatgaccagcagagagttt
tccctcaatgcagcagcgtgtcgcctgcttcagaacatcatgcctggactggagacagcc
gtggtctttcaggaaaaggagggcatagttgaaaggctgtttaagtgggctcaggaggcc
gagcagcccctcagaatctacgccacgggcttgttggccggcgctatggagaaccaggac
atcgcagccaactaccgggaggagaactctgttttggtgcctttgatgctgcatcggatg
cgcgagcttcaggacaaggatgcagagaacaaaagggatatcaaacgaccgagccccagg
aagacgttgagcgagccgctgctgcctttggacgaggagaccgttgacggaggctttgag
gagaagcccttcacaccggggagaaacggagcggagagggagggggcgggcccggaggag
gacggcgacattcccttcacgaccatcgagcccgaaaacgagctttcgttccgactcaac
tcccctcacaagaccagcagccgtgccaactcggctgttaaaaccatgatgaagcccata
tccgccctgatgcaccagggcgtgtcggacagcagcggctacctaaagaggaaggcagag
agggagagcggcaggaccttgaaacagaagctaaatttctctttgcccgacccggacagg
aacttcagtgagctttccaacagcagctggtctgagatgagcccctgggtgatcggcaac
aactatcacctttaccctctgaccccagagatcgagcagaggctcatcctgcagtatctc
acacctctgggagaatatcaggagctgctggcggtgttcatgcagatgggagctcgtgag
ctgctcatgcactatatggatctaaagcagaccaatgacgtgcagctcaccttcgaggct
ctgaagtacctggcgtctctgctgctgcacaagaagtttgcagcagagttcgtggctcac
ggaggagttcagaagttactggaaatccccaggccgtccatggctgctaccggagtgtct
ctgtgcctctactacctcgcctataaccaggacgccatggaaagggtgtgcatgctgcct
cactccatcctgtcagacgtggtcggttacacgctgtggctgctggagtgctctcacgca
tcgggctgctgccacgccaccatgttcttctccatctccttctccttccgcgccgtcctg
gagctcttcgacaggcaggacgggctccgacgcctcgtcaacctgatcagcactctggag
atcctgaacccggaggaccagggagcgctgctgagtgatgatgagattttttccagcagg
cagacggccaagcacacctgcatggccctgcgcaggtactttgaggcccacttggccatc
aaggtggagcaagtgaagcaatccctgcagcgcacagaggggggcgcccccattcactcc
caaccgtactataaggcggtcagctacagccgcgagcaggtggtggaaatgatggagttt
ctgatagagtacggtccactcagactctactgggaaccagcagaggtctttcacaagctg
tcatgtgtgcagctcctcctgcagctcatttccatcgcctgtgactggaggacctactat
ggcaggagcgatacagtgcgttacgctctcgacatcctcagcatcctcacagttgttcca
aagacccagctgttgttgtcggaggccgtcgctgtgcttgatgagggaggatccactgtt
tccactgtcggaatgagtatcgtcctggcagtcgcagagggagaggtgtttgtaaatgat
gccgacattcagaagtcagctctgcaggtcgtcatcaactgcgtctgtgctccggacaaa
cgcatgtccagcattggcaagttcatcgcaggcaccccccgccgccgcctgcctcagcag
accaaagccagcgagagtgtgctcactaagatgtggaatgtggtgcagtccaacaacggc
atcaaggtgctgctgtccctgctgaccgtgaagatgcccatcaccgacgcagatcagatc
cgagctctggcctgtaaggctctggtgggcctctcccgctccacctccgtcagacagatc
atcagcaagctgcctttgttcagcagcggacacatccagcagctcatgaaggagcccgtg
ctccaggacaaacgcagcgagcacgtcaagttctgcaagttcgccgccgagctgatcgag
aggatctccgggaagcctctgatgatcggtacggacgtgtctctggcgtggctgcagagg
gccagcgtggtcgccaagtccaggatctccttcccggagaaggagctactgctgctcatt
aggaaccaccttatggccaaaggcctccacgacacagccaccaccctcacaaaggaggcg
gatctcccgatggcgtgtgtgtctctctcgacacattcagcttctgctttccctcccgtc
gctcctcccctgcccgcctcccctgctgccactctgccccgaaccccacggctggccaac
ggcgtcgtgtcaagactcataaaccatccctctcttttgtccaccccgggatccagcaat
ctacaaacgcgtccctccacgtcacaatccaccgtgtcttcctccgctgctttcccctcc
acgtccgtcgcgccctgcaccaacggctccccgctcatcgggcgaatcgttttctcgcgc
gaacgccaggcgggttgcactacggtgagctgcaagaagccccgggtgctgagacagaag
tctgaccacggcgccttcagccagagtccggccatgaagaagcagtttgaccggcacctg
ccgtcgccccccgcgttagacagcatcatcacggagtacctgagggaacagcacgctcgg
tgtaaaaaccccgtggcgacgtgcccgccgttctccctcttcaccccccatcagtgcccc
gaacccaaacagagacgccaagcacccatcaacttcacatcccgtcacaatcggagggtt
atttatcctaaatacggaggagtggacggaggctgcttcgacagacatctcatcttcagc
aggttccggcccatctccgtgttcagggaggcggacgaggacgagagcggattcatgtgt
tgtgccttctcagctcgcgagcggttcctgatgctcgggacgtgcacggggcagctcaaa
ctctacaacgtgtttacaggccaggaggaggccagctacagctgtcacagctcagccatc
acccacctggagccctcacgggacggctctctgctcttaacatcagcctcttggagttac
ccgctgtctgctctgtggggcatgaaatcagtcttcattatgaagcattcttttctgggc
gaccattacgtggagttcagtaagctctcgcaagatcgtgtcattgggacgaaggaacac
atagcgcggatttatgacatccagacgggtcaggtgactctgaccttaaacaacccagac
ctggccaacaactacaagaggaactgcgccaccttcaacccgacagacgacctggtgctg
aatgacggcgtgctgtgggacgttcgtacggctcaggccatccacaagtttgacaagttc
aacatgaacatcagcggcgtgttccatcccaacggcctggaggtcatcgtcaacacggag
atttgggacctgaggaccttccacctcctccacacggtcccggctctggatcagtgccga
atagtcttcaacaacaacggcaccgtcatctatggagcaatgttgcaggccgacgatgaa
gacgacatgatggagatgcagatgaaaagtccgtttggttcatcgttcaggaccttcaat
gccacggactacaaaccaatcgccactatcgatgtcaagaggaatatatttgacctttgc
actgataccaaagactgctaccttgctgtgattgagaaccaagactctgtgaacactgac
acagtgtgcagactgtacgaagtcggccggcagagacttgcagaggaagaggaggaggat
gaagaggatcaggaggacgacgatcaggatgatgacgacgacgacgacgattcagacgac
gacgtcgacacggatcccctcatcgccgagctcgagaacgagaacggcggcgatgatgat
gacgaagaggatgatgggaacgatgaattctctccgtcagatgaagaggtgtcgcggtta
ctcgaagacggtatcgacgtcggggacgacgacgatgaggatgacaacgacgacgacgac
tccgataatgacgacgttgatctggatggcgacaacgacagctccgacaactccgacctc
gaggatgacatcatcttatccctaaacgagtga
DBGET
integrated database retrieval system
