Anoplopoma fimbria (sablefish): 129100253
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Entry
129100253 CDS
T09102
Name
(RefSeq) calcium-responsive transactivator-like
KO
K15623
protein SSXT
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129100253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129100253
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129100253
GBAF(ncBAF) complex
129100253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
PrnB
Motif
Other DBs
NCBI-GeneID:
129100253
NCBI-ProteinID:
XP_054465814
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All DBs
Position
12:22305901..22311984
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AA seq
416 aa
AA seq
DB search
MSVAFSSARPRSKGGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLV
YLATIADSNQNMQSLLPAPPTPNMSMGPGAMGQSGGHAPSNLNDNMAPGLPPTSMMQSQM
SNGPSHAPMQQQAGQLQSAIPSASLSLQAGSYGSSASASGYSHAAPASQGTGPGYGSSSS
SSSSSSSSTPSSSSSRSNLNMQTNQVSMMHQQSATPHYSPAQVGGQHYQGQQAMGMMGQG
SQGNSMMSQRPIGSYRSAQQGSAQQYMGQDEFYGEQYGHTQSSSEPINRLYYPDGHGEYS
YQQSSYGEQGYDRSFDESSQHYYEGGNSQYTQQQAQYQQGSGQQQPFSQQQYSSQQGYSG
QPQGYGPGQGGSSQYSQYQQGQSQQYGSYRSSQGGSGAQTQRPYAYEQGQYGNYQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttttcatcggcgcgccccaggagtaaaggaggggaggtgacccagcaa
accattcaaaagatgctggatgaaaatcatcatttaatacagtgtataatggattaccaa
agcaaaggcaagacagctgaatgcacacagtatcagcagatcctgcacagaaatcttgtg
tacttggccacgatagcagattcaaatcagaacatgcagtcactgctacctgcacctccc
actcccaacatgtcaatgggtcctggagcgatgggccagagtgggggtcatgctccgagc
aacctcaatgacaacatggcccctggtctgccccccacatcaatgatgcagagccaaatg
agcaatggccccagccatgcccccatgcagcagcaggctggtcagctgcagtcggccatt
ccctccgcatccctcagcctgcaagccggcagctacggtagctcggcgtcagcctccggc
tacagccacgctgcgcctgcctcccagggcaccgggcctggctatggctcttcctcctcc
tcctcctcctcctcttcttcctccacaccctcctcttcctcctcccgcagcaacctcaac
atgcaaaccaaccaagtctccatgatgcaccaacagtctgcaactccacactactcccca
gcccaggttgggggtcaacactatcagggacagcaggccatgggcatgatgggtcagggt
agtcaaggaaacagtatgatgtctcagagacccattggatcctaccgctccgcacagcaa
ggatctgcacagcagtacatgggacaagacgagttctacggagagcagtatggacacact
cagagctccagcgagcccataaaccggctatattaccctgatggtcacggggagtactcg
tatcaacagtcttcgtacggtgagcaaggctacgacaggtcctttgatgaatcctcacag
cattactatgaaggaggtaactctcagtacactcagcagcaggcccagtatcagcaggga
tctggccagcagcagcccttcagccagcagcagtactcctctcaacaaggctacagcgga
cagccacagggatacggtcctggccagggtggatcttctcagtattctcagtatcagcag
ggtcaaagccaacagtatggctcctaccgctcctcccagggaggctctggagcgcagacg
cagaggccctatgcttatgaacagggtcagtatggaaattatcagcaataa
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