Anoplopoma fimbria (sablefish): 129100259
Help
Entry
129100259 CDS
T09102
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129100259 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129100259 (vps35)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
129100259 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
129100259
NCBI-ProteinID:
XP_054465828
LinkDB
All DBs
Position
2:complement(29766042..29782866)
Genome browser
AA seq
798 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEPAEGTEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLTNTLDYNTTILAQEQVDAILTLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNLRIRYTLPPLVFAAYQ
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRSTDKSGEEIRDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVAVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccacacagcagtctccccaggatgaacaggagaagcttcttgatgaggctgtg
caggctgtcaaggtccagtcgttccagatgaagcgatgcctggacaagaacaagctgatg
gatgctctgaagcacgcctccaacatgctgggtgagctgaggacctcgatgctttctcca
aagagctactatgagctatatatggctatctctgacgaactccactacctagaagtttat
ctgactgatgagtttgccaaaggacgcaaggtggcagatctctatgagctggtccagtat
gcaggcaacatcattcccagactctacctgctgatcacagtgggtgtcgtgtacgttcgc
tccttcccccagtctcgtaaggacattctgaaggacctggtggagatgtgtcgtggggtc
cagcacccactcaggggcctcttcctccgaaactacctattgcagtgcacccgcaacatt
ctgccagatgacggagagccggcagagggaacagaggagatgaccggtgacatcaatgac
tcgatcgacttcgtcctcctgaactttgcggaaatgaacaagttatgggtccgaatgcag
caccagggtcacagccgtgaccgagagaagagagaaaaggagcgacaagaacttaggatt
ctggtcggaaccaacctagttcgcctcagccagctggagggtgtcaacgtggataagtac
aaacagattgttctttctggagtgctggaacaggttgtgaactgcagggactcgttggct
caggagtatctaatggagtgcatcattcaggttttcccagatgagtttcaccttcaaacc
ctgaaccctttcctacgttcgtgcgctgagctccatcaacatgtcaatgtcaagaacatc
atcattgccctcattgacagactcgctctctttgcccatcgagaagatggccctggcatt
ccagctgagattaaactgtttgacatcttctctcagcaagtggccaccgtcattcaatct
cgccaggacatgccatcagaggacgtggtctctctacaggtctctctcattaacttagcc
atgaaatgctaccctgaccgtgtggactatgtagataaagtcctggagagcaccgtggag
atattcaacaagctcaacttggaacacatagcgaccagcagtgccgtgtcaaaggaactc
accagactgttgaagatcccggtggacacctacaacaacatcctgacggtgctgcagctc
aagcacttcccgccgctcttcgagtacttcgactacgagtcgcgcaagagcatgagctgc
tatgtgctgaccaacacgctggactacaacaccaccattctggcacaggaacaggtggac
gccatcttgaccttggtatccacactgatacaggaccagcctgaccaaccagctgatgac
cctgaccccgaggactttgctgaggagcagagccttgtgggtcgtttcatccatctgctc
cactctgaagatcctgatcaacaataccttattctgaacacagcccggaaacactttggg
gcgggtggaaacctaaggattcgctacaccctccctcccctggtgttcgctgcctaccaa
ctggccttcagatacaaggaaaactcttcatcggatgacaagtgggagaaaaagtgccag
aagatcttctccttcgcccaccagaccatcagcgctctgatcaaggcggagctcgccgag
ctgcctctgcgactcttcctgcagggggcgctggccgcaggggagatcggcttcgagaac
cacgagaccgtagcttacgagttcatgtcacaggccttctctctgtatgaggatgagatc
agtgactccaaagcccagctggcagccatcacgttgatcatcggtacctttgagcgaatg
cggtgtttcagcgaggagaaccacgagccgctgaggactcagtgtgcgctggccgcctcc
aagctgctgaagaagcccgaccagtgccgagccgtcagcatctgcgctcatctcttttgg
tcgggtcgcagcaccgacaaaagtggtgaagagattcgtgatggcaagcgggtgatggaa
tgtttaaagaaagccctcaagatcgccaaccagtgtatggacccatcgctgcaagtccag
ctcttcattgaaatcctcaacagatacgtctgcttctacgagagggaaaacgatgcggtg
accgtcgcggtattaaaccagcttatccagaaaatcagggaagatcttcccaacctggag
gcgagcgaggaaacggagcagatcaacaaacacttccacaacacactggagcaccttcgc
ctgcagagagaatcccctgagtctgagggccccgcctatgagggcctggtcctttaa
DBGET
integrated database retrieval system
