Anoplopoma fimbria (sablefish): 129100280
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Entry
129100280 CDS
T09102
Symbol
itga5
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-5
KO
K06484
integrin alpha 5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03266
Virion - Herpesvirus
afb04145
Phagocytosis
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
afb04517
IgSF CAM signaling
afb04518
Integrin signaling
afb04810
Regulation of actin cytoskeleton
afb04820
Cytoskeleton in muscle cells
afb05100
Bacterial invasion of epithelial cells
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
129100280 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129100280 (itga5)
04517 IgSF CAM signaling
129100280 (itga5)
04518 Integrin signaling
129100280 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129100280 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
129100280 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129100280 (itga5)
04810 Regulation of actin cytoskeleton
129100280 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129100280 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129100280 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129100280 (itga5)
04515 Cell adhesion molecules [BR:
afb04515
]
129100280 (itga5)
04090 CD molecules [BR:
afb04090
]
129100280 (itga5)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129100280 (itga5)
Cell adhesion molecules [BR:
afb04515
]
Integrins
Integrin alpha subunits
129100280 (itga5)
CD molecules [BR:
afb04090
]
Proteins
129100280 (itga5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
DUF8847
Motif
Other DBs
NCBI-GeneID:
129100280
NCBI-ProteinID:
XP_054465847
LinkDB
All DBs
Position
12:16836658..16871077
Genome browser
AA seq
1067 aa
AA seq
DB search
MIHLFSNMGLERFRVKKTPGIVALLVRSLLCISGLVLTFSPPVCEAFNLDVENPAVYSGP
NGSYFGYAVDFYLADSASVSVVIGAPKANTNQVNVTEGGSVFYCPWSLSQADCHTIEFDT
EGDRTALLNNTKHQVDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDVPHSDATGTCYL
SVHNFTKFVEYAPCRSEISDAVGQGYCQGGFSADFTTDGRVVLGGPGSYFWQGQVITAAK
EDIIKSYYPGFFMQSVEGQIQTKQVKAEHDDSYQGYSIAVGEFSGDQVEDFVAGVPKGLM
LYGSVSILNGTDLKTMINYTGEQMGSYFGYAVATTDINSDGMADLLVGAPMFMVRGSDGR
LEEVGRVYVYLQQSPLNLELRPPHLTGTQVYARFGSTIAPLGDLNQDGFNDVAISCPFGG
EDRQGLVYIYNGYSEGLREKPSQVLTGQWAAGAIPASFGFALRGAKDLDMNGYPDLIVGA
FGVDKAVLYRSRPIVDTIASLTINPTMINPEEKNCMVINGNTSVPVSCVNLSFCISADGK
RLPDILDFQMEVQLDSNKQKQKGAVRRALFLDSQQPLHQRSVRLSHGERVCHSTKIYLRE
EKDFRDKLSSIYVALNFSLDPKAAADSHGLRPILNYQTTNVIEQKAQILLDCGEDNICVP
DLKLAVHGNRKEVYLGDDNSLTLTFNAKNEGEGGAYEAELYVVLPPEADYSGIARNNESL
TELTCSYETENQTRYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTHKTVQFELQIRSKNEN
NSHSEVVPYKLEVVVQAEVILQGVSRPDKVFFPPANWKVPKNYGVEQDVGPAVEHVYELV
NNGPSRISHTLLELRCPXSVQGQNLLYPLEFSVEGPMNCTSDRNMNHLHLKLQHTSTEPP
ILALKADQHHVERRDVHKNQLAHLTNLSCSNTECWALQCTVGLLEKGTTAILKVRSRIWA
ETFTQRAYKQYVLECLATYSVEKMPYAILPKHAPSGHKKVVTPVVWNKPDIENSVPLWII
ILAILAGLLLLALLIYVLYKFGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgattcatttattctcaaatatgggcttggaacggtttcgcgtaaagaagacgccgggg
attgtagcccttctggtccgctcgctcctttgtatcagcgggctggtactcactttttct
ccgcctgtctgcgaggcgtttaacttggacgtggagaacccagctgtttacagcggacct
aacgggagctacttcggatatgctgttgacttttatctggccgattctgccagtgtgagt
gtggtgataggagctccaaaggccaacaccaatcaggttaatgttacagagggaggatcc
gtcttctactgcccatggagcctcagccaagcagattgtcacaccattgagtttgatact
gaaggggatcgcaccgccttgctcaacaacacaaaacatcaggttgatttcaagtcccac
caatggttcggcgcaactgtgcgttctcacggtgacacaattctggcttgtgccccgctc
tactcctggaggactgaaaaggatgtcccccactcagacgctacaggaacttgctacctc
tcggtccataatttcaccaaattcgtggagtacgctccctgccgctcagagatcagtgat
gcggtcggacaaggctactgtcagggaggattcagcgctgacttcacaacggatggcaga
gtggtattgggagggccaggtagctacttctggcaaggtcaggtgatcactgcggctaag
gaggacatcatcaaatcatactatccaggcttcttcatgcagtctgtggagggacagatc
caaaccaaacaggtgaaggctgaacatgatgacagttaccaaggctactctattgctgtt
ggggaattcagtggtgatcaagtggaagatttcgtggccggcgttccaaagggactcatg
ctttatggttcggtgtctattctgaacggaacagatctgaagaccatgattaactacact
ggtgagcagatgggatcatattttgggtatgcagtggcaacaactgacatcaacagtgat
gggatggctgacctgctggtgggagctcccatgttcatggttcggggctctgatggccgt
ctggaagaggtgggacgggtctatgtttacctacagcagagccccctgaacctggagctc
cgcccacctcacctgacaggcacccaggtgtatgcgagatttggcagcaccattgcacct
ttgggagatttgaaccaggatggtttcaatgatgtggctatcagctgtccgtttggaggg
gaggatcgtcagggactggtctacatctataatggatactcagaaggactcagggaaaag
ccatctcaggtgctgactggccagtgggctgctggtgcgattcctgccagctttggattt
gccctcagaggagctaaggaccttgacatgaatggatatccagatctcattgttggtgcc
tttggtgttgataaggcagttctctatagatcccgtccaattgttgacaccattgcctct
ctgacaattaaccccaccatgatcaaccctgaagagaagaactgcatggtcatcaatgga
aacaccagtgttcctgtttcctgtgttaacctgagtttctgcatatctgctgatgggaaa
cgcctaccagacatcctagatttccagatggaggtgcagctggatagtaataagcagaag
cagaagggtgcagtgaggagggctctgttcttggattcccagcagcccttgcaccagagg
agtgtgaggttgagccatggcgagcgtgtatgccacagcaccaagatctacctaagagag
gagaaagacttcagggataaactctcctctatttatgtggccttgaacttcagcttggat
ccaaaagctgccgctgactcccacggcctgcggcccatccttaactatcagaccaccaac
gtaattgagcagaaggctcagattctgttggactgtggagaagacaacatctgtgttcct
gacttgaagctggcagttcacgggaacaggaaggaagtctaccttggtgatgacaactcg
ctgactttgactttcaacgccaagaatgagggtgagggaggggcgtacgaggcagagctc
tatgtggtgctgccccccgaagctgactacagcggtattgcccgcaacaatgagagcctg
accgagctcacctgtagctatgagacggagaaccaaacacgatacctcagctgtgatttg
ggcaacccgatgaagtctggtaccagtctgtgggcaggtctgcgtttcacagtgccacgc
ctgaaggacacgcacaaaactgttcagtttgagctgcagattcgcagtaaaaatgagaac
aattcccacagtgaggttgtgccttacaagctggaggtggttgttcaggctgaagtcatt
ctacagggggtgtctcgaccagataaggtcttcttcccgccggccaactggaaggtgccc
aaaaactacggggtggagcaggacgttgggcctgcagtggaacacgtctatgagctggtg
aacaacgggcccagccggatcagccacaccctactggagctgcgctgccccntcagtgtc
cagggtcaaaatctcctttaccctcttgagttctccgtagaaggccccatgaactgcacc
tccgacagaaacatgaaccacctacacctcaaactccagcacacgtccacagaaccacct
atcctagccctgaaggcagatcagcaccacgtcgagaggagggatgtccacaaaaaccag
ctcgctcatttgactaatctgtcctgctctaatacggagtgctgggccctccagtgcacc
gtgggtttgctggagaaggggactactgcaatcctcaaagtgcgctcccgcatctgggcc
gagaccttcactcagagagcttacaagcaatatgtgctggagtgcctcgccacatacagc
gtggagaagatgccttacgccatcctacccaaacatgctcccagtggacacaaaaaggtg
gtgacccccgtggtgtggaataagcctgatatcgagaactcagttcccttgtggataatc
atcttggccattctggctggtttactgcttctggctctactcatctacgtcctatacaag
ttcggcttcttcaagagatctctaccttatggtaccgccatggagaaagctcaactcaaa
ccacaggctgcctctgaggcctaa
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integrated database retrieval system
