Anoplopoma fimbria (sablefish): 129100359
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Entry
129100359 CDS
T09102
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129100359 (top1b)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
129100359 (top1b)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Topoisomerases
129100359 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
129100359
NCBI-ProteinID:
XP_054465942
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All DBs
Position
12:complement(25402997..25419746)
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AA seq
767 aa
AA seq
DB search
MSAEHTHGNSQVYSAAKGSEPQKHKDKHKDKEHRHKDHKKDKERERFKQSNSEHKDHSEK
KHRDKEKLKHSNGSSDKHREKHKEKDKEKRREEKIKSYHVEKPKKEKENGYVRERSPAAI
KSEPEEDNGFYPSPQHNRTSKREFDDEEFEYKPKKVKTEHDKKAKKRKHEYEEDDEDEDI
KPKKKTKDKKATEGKKAKKEEEEKWKWWEEERSTDGSKWRFLEHKGPVFAPPYEAMPDKV
KFYYDGKPMKLNAPAEEVATFFAKMLDHEYTTKDIFRKNFLKDWRKEMTSEEKSKITDLN
KCDFGEMNEYFKAQSEARKQMSKQEKQKIKEENERLLQEYGFCIMDNHKERIGNFRIEPP
GLFRGRGDHPKMGMLKRRIRPQDIIINCSKDSKQPKPPPGTKWKEVRYDNKVTWLASWTE
NIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRIRTQYRDDWKSKEMRIRQRAVA
LYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYPKMDDQEYVVEFDFLGKDSIRYY
NKIPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITL
QQQLKELACPDDSLPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDEKQNQL
SAARKQLKSAKAEHKASHDEKSKKTLEVKRKAVQRIEEQLMKLQVQATDREENKQIALGT
SKLNYLDPRISVAWCKKWSVPIEKIYNKTQREKFAWALDMAEKDYEF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagaacacacacacgggaactcacaggtttattctgcagctaaaggaagcgaa
ccgcagaaacataaagacaaacacaaagacaaagagcaccgacacaaagaccacaagaaa
gacaaggagcgagagaggttcaagcagagcaacagcgaacacaaggaccactctgagaag
aaacacagggacaaagagaagctgaagcacagcaatggcagctcagacaagcacagggaa
aaacacaaagagaaggacaaagagaagaggagagaagagaagatcaaatcctaccacgta
gaaaagccgaaaaaggagaaagaaaatggatatgtgagagaaagaagtcccgctgccatt
aagagcgaacccgaagaagacaacggattctatccgtctccccaacacaacaggacctcc
aaacgagagttcgacgatgaagaatttgaatacaagcccaaaaaagtcaagacagagcac
gacaaaaaggccaagaagaggaaacatgagtacgaggaggacgacgaggacgaggacatc
aagcccaaaaagaagacaaaagacaagaaagcaacggaaggaaagaaagccaaaaaggag
gaggaggagaagtggaaatggtgggaggaggaaagatccaccgatggatccaaatggcgc
ttccttgagcacaagggtccagtgtttgcaccgccgtatgaagccatgcctgacaaagtc
aagttttactatgatggtaagcctatgaaactgaatgctcccgccgaggaggtagctacg
ttttttgccaagatgttggatcacgagtacaccaccaaggacatcttcaggaagaacttc
ctcaaggactggaggaaggaaatgacatcagaggagaaatcaaagatcaccgacctgaac
aagtgcgacttcggtgagatgaatgagtacttcaaggcccaatcagaagcgaggaaacag
atgtcgaaacaggagaaacagaaaatcaaagaggagaacgagagactcctccaggagtac
ggtttctgcatcatggacaaccacaaggagaggatcggaaacttccgcatcgagccgccg
ggactgttccgaggacgaggggatcacccgaagatgggcatgttgaagagacgcatcaga
ccccaagacatcatcatcaactgcagcaaggactccaagcagcctaaacctcctccaggg
acaaagtggaaggaggttcgctatgacaacaaggtgacctggctggcctcttggacggag
aacatccagggctccatcaaatacatcatgttgaatccgagctccaggatcaagggggag
aaggactggcagaaatatgagaccgctcgtcggttgaagaagtgcgtggatcgaatccgt
acccagtatagagacgactggaagtccaaagagatgaggatcaggcagagagctgtggct
ttgtatttcatagacaagcttgcactgagagcaggcaacgaaaaggaggaaggtgagacg
gcggacaccgtcggctgctgctcgctgcgggtggagcacatcaaactctaccccaagatg
gacgaccaggagtacgtggtggagtttgacttcttgggaaaggactccatccgctactac
aacaagatccccgtggagaagagggtgtttaaaaacctccagctgttcctggagaacaag
cagcctgaagacgacctctttgacagactgaatacttctatcctgaataagcacctccag
gagctgatggacggcctgacagccaaggtctttcgtacctacaacgcctccatcaccctc
caacagcagctcaaggaacttgcctgccctgatgacagcctcccagctaaaatcctgtct
tacaaccgtgccaaccgggcggtggccatcctctgcaaccaccagagagctccacccaaa
acctttgagaagtccatgcagaaccttcagaccaagatcgacgagaaacagaatcaactg
tcggcagccaggaagcagctgaagtctgccaaggctgaacacaaggcttcccacgatgag
aagagcaaaaagactctggaggtgaagcgtaaagctgtccagaggatagaggagcagctg
atgaagctccaggtccaggccaccgacagagaggagaacaagcagatcgctctgggcacc
tccaagctcaactacctggatccacgcatctctgtggcatggtgcaagaaatggtccgtc
cccatcgagaagatctacaacaaaacgcagagggagaagtttgcctgggcgctcgacatg
gctgagaaggactacgagttttaa
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