Anoplopoma fimbria (sablefish): 129100364
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Entry
129100364 CDS
T09102
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04120
Ubiquitin mediated proteolysis
afb04144
Endocytosis
afb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129100364 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129100364 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
129100364 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129100364 (nedd4a)
04121 Ubiquitin system [BR:
afb04121
]
129100364 (nedd4a)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129100364 (nedd4a)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129100364 (nedd4a)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129100364 (nedd4a)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
HECT type E3
129100364 (nedd4a)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
129100364 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
129100364
NCBI-ProteinID:
XP_054465951
LinkDB
All DBs
Position
2:complement(17451055..17475700)
Genome browser
AA seq
928 aa
AA seq
DB search
MAALSPQIRGLQIDEEESRVLKVKVVAGIGLAKKDILGASDPYTRLSLYDPINGEITSLQ
TKTKKKTLDPKWNEEFFFKVDPQKHRLLLEVFDENRLTRDDFLGQVDVPLNQIPTENPNT
ERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNPGSEEETAEQTEDTDPGWEFLESQDM
SGPRQSQLLPALPPGWEERQDNLGRTFFVNHESRTTQWQRPTIQDGDVQVQRRQNNNMDV
EQAFITRRQISDPDENNTRESPESWEIITEDESTLYHSNNQLASPPPHGPDEFLPFHDEL
RNTHFSGATAGELRASQMNHASNSSHSSRRGSSQSSTGEEHPINPVLVPTSAGLPPGWEE
KRDSKGRRYFVNHNTRSTSWTRPLIQKTTETPPAAAAPAPAAAAAAAAAAAAQSGAGVPQ
SQTPPLPPMSPEDSHSQHTPSPEATHDSGSLPAGWEVRSAPSGRPFFIDHNTKTTTWDDP
RHLKIPVHMRKRPSLDPSDLGPLPPGWEERIHTDGRIFYIDHNTKNTQWDDPRLQNSAIT
GPAVPYSRDYKQKYDYFRKKLKKPADIPNRFELKLRRNAVLEDSYRRILSVKRADLLKAR
LWVEFEGEKGLDYGGVAREWFFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHL
TYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKQITLQDMESVDSEYFNSLKWILDND
PTDLDLRFTIDEELFGQTHQHELKPGGADIVITNDNKKEYIHLVMQWRFVNRIQKQMTAF
KEGFFELIPQDVIKIFDENELELLMCGLGDVDVNDWRENTKYKNSYCSNHVVMQWFWKTV
LLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLD
LPPYESFEELREKLHIAIENAQGFDGVD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactttccccacagatccgaggacttcagatagatgaggaagaatccagagtc
ctaaaagtgaaagtcgttgctggaattgggctggccaaaaaagatatacttggagccagc
gatccatacacaagactttccctctatgaccctatcaacggagaaatcacaagtcttcag
actaaaacaaaaaaaaagacactggacccgaaatggaacgaagaattctttttcaaagtt
gatccccagaagcatcgcctgctcttggaggtgtttgatgagaaccgcctgacacgtgat
gactttctgggacaggtggacgtccccttaaatcagataccgacagaaaatcctaataca
gaaaggccatacacattcaaggattttctgcttcacccacgaagccacaagtccagagtc
aaaggtcacctgcgtctcaaaatgacgtacttgccaaaaaacccaggctcagaagaggaa
acggcagaacagactgaggacacagaccctggatgggagtttctggaatctcaggacatg
tcaggtcccagacaaagccagctgctgcctgctctgccccctggctgggaggagcggcag
gacaacctgggaagaaccttctttgtcaaccatgagagcagaaccacacagtggcaacga
cccacaatccaggatggcgatgtccaagtgcagagaagacagaacaataatatggatgtg
gagcaagcttttattacccgcagacagatctctgacccagatgagaacaacacacgagag
tctcctgagagctgggagattattacggaggacgagtccaccttgtaccacagcaataac
cagctcgcatcacctccacctcatgggcctgacgagttcctgccgttccacgacgagctg
agaaacacacacttttctggggccacagctggcgagctgcgcgcctcccagatgaatcat
gctagtaattcaagtcattccagtcgcagaggaagttcccagtcttcaacgggggaggaa
catcctattaatcctgtgctcgttccaacctcagctgggttgcctccagggtgggaggag
aagcgagacagtaaaggaagacgctactttgttaaccacaacactcgatccacttcatgg
acacgacccctcattcagaagaccacagagacaccaccagcagcagcagcaccagcacca
gcagcagcagcagcagcagcagcagcagcagcagcacagagtggtgcaggtgtaccccag
agccagactccacccttaccacccatgtcccctgaggactctcactctcagcacacccca
agccccgaggccacccatgattctggctccttgccggctggttgggaggttcgcagcgct
cccagtggaagaccctttttcattgaccacaacacaaagactactacctgggacgatccc
aggcatctcaagattcctgtgcacatgaggaagagaccctcactcgacccatctgatctc
ggtcctctgccgcctggttgggaagagaggatccacactgatgggaggatattctacata
gatcacaacactaagaacacacaatgggatgatcccagactgcagaactcagctataacc
ggaccagcagtgccttattccagagattataaacagaagtacgactacttccggaagaag
ctgaagaaaccggctgacatcccaaaccgctttgagttgaaactgaggcgcaatgcagtg
ctggaggactcataccgacgcatcctgtcagtgaagagggcagacctgctgaaggcacga
ctgtgggtggagtttgaaggagaaaaaggactggactatggtggtgtggccagggagtgg
ttcttcctcatgtccaaggagatgttcaacccgtactacggactgtttgagtattctgcc
acagacaactacacactgcagattaaccctaactcaggtttatgtaatgaggaccacctg
acctacttcaagttcatcgggcgcgtggcaggcatggcggtgtatcacggcaaactgctc
gacgctttcttcattcggcctttctacaagatgatgctgcagaagcagatcactcttcag
gacatggagtctgttgacagtgaatatttcaactccttgaagtggattttggacaacgac
ccgacagacttggatttgaggtttacgattgatgaagagctgtttggacagactcaccag
catgaactgaagccgggcggcgctgatattgtcatcactaatgacaacaagaaggaatac
atccatctggtgatgcagtggaggtttgtgaacaggatacagaagcagatgactgccttc
aaagagggattctttgagttgataccccaagatgtgatcaagatctttgatgagaatgag
ctcgagctgctcatgtgtggtcttggagatgtggatgtgaatgactggagagagaacacc
aagtacaagaacagctactgctccaaccacgttgttatgcagtggttttggaaaacggtg
ctgttgatggatgcagagaagcgaatcaggctcttacagtttgtgacaggaacttcaagg
gtcccaatgaatggctttgctgaactctatgggtccaacggaccacagctgttcaccatc
gagcagtggggaacacgtgataaactccctcgagcccacacatgcttcaaccgactggac
ctgcctccttatgagtcctttgaggagctgagggagaaactccacatcgccattgagaat
gcacagggcttcgatggggtggattag
DBGET
integrated database retrieval system
