Anoplopoma fimbria (sablefish): 129100394
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Entry
129100394 CDS
T09102
Symbol
tnfaip1
Name
(RefSeq) BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 isoform X1
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129100394 (tnfaip1)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
129100394 (tnfaip1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
Motif
Other DBs
NCBI-GeneID:
129100394
NCBI-ProteinID:
XP_054466019
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Position
1:2891944..2898432
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AA seq
433 aa
AA seq
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MAASRVAAPHPAVKRSAEEEGGGQSLTLLLLLLRLNHRFFGGFLRVPVLTESSTAAEDVQ
LPDSAVRNDLEQCEVVAASSVAVTTAGDLRTSVCRVVIYLQRDMSGDSCLPQRQTHTHSL
HSASSASPLACPKTKTASYRGAVGLGNKYVRINVGGSLFYTTLQVMTKQDSMLKAMFSGK
KEVFTDKEGWILIDRCGKHFGNILCFLRDGTVALPKGRQAVQEVLAEAKYYDVQGLVELC
QNTLQGNKELPMCVIPVITSSKEEEKLIQSSTKPVVKLVYNRSNNKYSYTSNSDDHLLKN
IELFDRLSLSFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIFYATEKKQTKVEFP
EARIYEETLNTFLYETMPPPDNLLLEATRRSYNNCGSHSEEEEGPSGGAEIRERVRRIHV
KRYSTYDDRQLGH
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcacgtgtcgcagcgccacatcctgccgtaaagcgttccgcagaagaagaa
ggaggaggacagagtttaactttacttttgttgttgttacgtctgaatcatcggttcttc
ggtggattccttcgtgtcccggtgttaacggagagttcgacggcagcagaagacgtccag
ttacctgacagcgccgtgaggaatgatctggagcagtgcgaggttgtggcggcctcatca
gtagctgtcaccacggcgggggacctccggacctccgtctgcagggtggtcatctacctc
cagagggacatgtccggggacagctgcctgccccagcgtcaaacccacacccactcccta
cactccgcctcctcggcctcccctctggcctgtcccaagaccaagaccgccagttaccga
ggagcggtgggcctgggcaacaagtatgtccgcatcaacgttggcgggagtctgttttac
accacgctgcaggtgatgaccaagcaggactccatgctgaaggccatgttcagcgggaag
aaggaggtgttcactgataaagaaggttggatcctgatcgaccgctgcgggaaacacttt
ggcaacatcctgtgcttcctacgcgacggcacagtcgccttgcccaaaggtcgtcaggcc
gtccaggaggtgctcgccgaggcgaagtattacgacgtccagggcctggtggagctttgt
cagaacaccctgcagggtaataaagagctgcccatgtgtgtcatacctgtgatcacctcc
agtaaagaggaggagaagctcatccagtcctccaccaagcctgtggtgaagctggtgtac
aacagaagcaataacaaatactcctacaccagcaactctgacgaccacctgttgaagaac
atcgagctgttcgaccggctgtctctgagcttcaacggccgcgtcctcttcatcaaggac
gtgatcggagacgagatctgctgctggtccttctacggtcagggtcgcaagctggccgag
gtctgctgcacctccatcttctacgccacggagaagaagcagaccaaggttgagttcccc
gaggctcgcatctacgaggagaccctgaacacctttctctacgagacgatgccgccgccc
gacaacctgctgctggaggccacgcgtcgcagctacaacaactgcggctcccacagcgag
gaggaggaggggcccagcgggggggccgagatccgcgagcgagtccgccgaatccacgtg
aagaggtacagcacgtacgacgaccggcagctgggacactga
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