KEGG   Anoplopoma fimbria (sablefish): 129100508
Entry
129100508         CDS       T09102                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129100508 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afb03000]
    129100508 (tbp)
   03021 Transcription machinery [BR:afb03021]
    129100508 (tbp)
Transcription factors [BR:afb03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    129100508 (tbp)
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129100508 (tbp)
  RNA polymerase III system
    TFIIIB
     129100508 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     129100508 (tbp)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 129100508
NCBI-ProteinID: XP_054466036
LinkDB
Position
2:14825722..14831116
AA seq 302 aa
MEQNNSVPPFQGQASPQGGAMTPGMSIFSPMMPYGSGLTPQPVQNTNSLSILEEQQRQQQ
QQQAQQANAGLPGTSGQTPQLYHSQTVAGSTTTALPGNTPHYGTPLTPMTPVTPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH
QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK
TT
NT seq 909 nt   +upstreamnt  +downstreamnt
atggagcagaacaacagtgtgccacccttccaggggcaggcctcccctcaggggggtgcc
atgaccccaggcatgtcaatattcagtcccatgatgccatatggctcaggcctgacaccc
cagcccgtccagaacaccaatagtttgtctatactggaggaacagcagaggcaacaacag
cagcaacaagcacagcaggcaaacgcaggccttcctggaacatcggggcagacacctcag
ctttaccattcccagacggtcgcaggctcgaccaccacagcgctgccaggaaacaccccg
cactacggcaccccgctgacccccatgacccccgtcacaccggccacaccagcctcggag
agctctggaattgtaccacagctacaaaacatagtatctactgtaaatctgggctgtaaa
ctggacttgaagaccattgccttgagagccaggaatgcagagtacaacccaaagcgtttt
gctgcggtcatcatgagaatacgagaacccaggaccacagctctcatcttcagctctgga
aagatggtctgcacaggagccaagagtgaggagcagtcgagattagctgccagaaaatac
gctcgtgtggtgcagaagcttggttttcctgctaagttcctggacttcaagattcagaac
atggtgggaagctgcgatgtgaagttccccattcgtctggaaggattagtcctcacacat
cagcagtttagcagttatgaaccggagctgtttccaggtctgatttacagaatgatcaaa
cctagaattgtcctgctcatctttgtctctgggaaagttgtactcacaggtgccaaggtg
agagcagagatctacgaagcgtttgaaaacatctatcccattctgaaaggcttccgcaag
acaacgtag

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